"
Team:British Columbia/Model3
From 2011.igem.org
(Difference between revisions)
| Line 15: | Line 15: | ||
<b>Reactive site of the three synthases</b><p></p> | <b>Reactive site of the three synthases</b><p></p> | ||
[[File:UBCiGEM model3 reactive site.jpg]] | [[File:UBCiGEM model3 reactive site.jpg]] | ||
| + | |||
| + | <html><h3>Future Directions</h3></html><p></p> | ||
| + | |||
<html><h3>References</h3></html><p></p> | <html><h3>References</h3></html><p></p> | ||
1. N. Eswar, M. A. Marti-Renom, B. Webb, M. S. Madhusudhan, D. Eramian, M. Shen, U. Pieper, A. Sali. Comparative Protein Structure Modeling With MODELLER. Current Protocols in Bioinformatics, John Wiley & Sons, Inc., Supplement 15, 5.6.1-5.6.30, 2006. | 1. N. Eswar, M. A. Marti-Renom, B. Webb, M. S. Madhusudhan, D. Eramian, M. Shen, U. Pieper, A. Sali. Comparative Protein Structure Modeling With MODELLER. Current Protocols in Bioinformatics, John Wiley & Sons, Inc., Supplement 15, 5.6.1-5.6.30, 2006. | ||
Revision as of 01:50, 29 October 2011
Monoterpene Synthase Structural Modeling
Three-dimensional structure of the 3 terpene synthases
File:UBCiGEM superimposed synthases.jpeg
Superimposition of the 3D structures of alpha-pinene synthase (blue), beta-pinene synthase (red), and limonene synthase (green). We used MODELLER (1) to automate homology-based 3D structure prediction. We identified an experimentally determined 3D structure of a taxadiene synthase from Pacific Yew (PDB ID: 3P5R) as an appropriate template. Reactive site of the three synthases
Future Directions
References
1. N. Eswar, M. A. Marti-Renom, B. Webb, M. S. Madhusudhan, D. Eramian, M. Shen, U. Pieper, A. Sali. Comparative Protein Structure Modeling With MODELLER. Current Protocols in Bioinformatics, John Wiley & Sons, Inc., Supplement 15, 5.6.1-5.6.30, 2006.
