Team:Amsterdam/2 May 2011

From 2011.igem.org

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{{:Team:Amsterdam/Header}}
{{:Team:Amsterdam/Header}}
{{:Team:Amsterdam/Notebook/Calendar}}
{{:Team:Amsterdam/Notebook/Calendar}}
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= '''Meeting 8''' =
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=02-04-2011 Meeting 8=
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==Funding==
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'''Funding'''<br>
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No letters received
No letters received
Sponsor letters to UvA and VU will be sent.
Sponsor letters to UvA and VU will be sent.
Internship funding might be useful.
Internship funding might be useful.
Labyrinth tv will be contacted by supervisor Douwe Molenaar.
Labyrinth tv will be contacted by supervisor Douwe Molenaar.
-
<br>
+
==Projects discussion==
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=='''Projects discussion'''==
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===Methane producing ''E.coli''===
-
 
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Yuri talked with expert Martijn Bekker.  
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+
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'''Methane producing ''E.coli'''''
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<br>Yuri talked with expert Martijn Bekker.  
+
Need to check if the trans-membrane protein is a problem:
Need to check if the trans-membrane protein is a problem:
*Toxicity
*Toxicity
*Can methane be made from lactose?
*Can methane be made from lactose?
*Can methane be made from Acetyl-CoA?
*Can methane be made from Acetyl-CoA?
-
 
+
===Plastic degrading bacteria===
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'''Plastic degrading bacteria'''
+
*It can be useful, but will it produce enough?
*It can be useful, but will it produce enough?
*Could plastic be grown on food waste?
*Could plastic be grown on food waste?
-
+
===Opportunistic infections with AIDS===
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'''Oppurtunistic infections with AIDS'''
+
*PAMPs are known,those can be used as targets
*PAMPs are known,those can be used as targets
*Different proteins show a good individual result while blasting
*Different proteins show a good individual result while blasting
*Look at Slovenia iGEM 2006
*Look at Slovenia iGEM 2006
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+
===Neglected diseases===
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'''Neglected diseases'''
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*We don't use viruses
*We don't use viruses
*Parasites will be checked, but full-grown are to difficult
*Parasites will be checked, but full-grown are to difficult
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+
===Signal transduction===
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'''Signal transduction'''
+
*Robustness
*Robustness
*Signals in cells are noisy
*Signals in cells are noisy
*Peter Swain is an expert on this
*Peter Swain is an expert on this
*What application?
*What application?
-
 
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===Chemotaxis===
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'''Chemotaxis'''
+
*Examples: Influence flagella, Circadian rhythms influencing
*Examples: Influence flagella, Circadian rhythms influencing
*Almhof is working on this
*Almhof is working on this
*It has been used before in iGEM
*It has been used before in iGEM
-
 
*Good idea: Let a bacteria take a molecule for transport
*Good idea: Let a bacteria take a molecule for transport
*Size and precision?
*Size and precision?
*Application?
*Application?
{{:Team:Amsterdam/Footer}}
{{:Team:Amsterdam/Footer}}

Latest revision as of 10:26, 21 September 2011

April
MTWTFSS
        [http://2011.igem.org/Team:Amsterdam/1_April_2011 1] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/2_April_2011&action=edit 2] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/3_April_2011&action=edit 3]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/4_April_2011&action=edit 4] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/5_April_2011&action=edit 5] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/6_April_2011&action=edit 6] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/7_April_2011&action=edit 7] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/8_April_2011&action=edit 8] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/9_April_2011&action=edit 9] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/10_April_2011&action=edit 10]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/11_April_2011&action=edit 11] [http://2011.igem.org/Team:Amsterdam/12_April_2011 12] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/13_April_2011&action=edit 13] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/14_April_2011&action=edit 14] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/15_April_2011&action=edit 15] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/16_April_2011&action=edit 16] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/17_April_2011&action=edit 17]
[http://2011.igem.org/Team:Amsterdam/18_April_2011 18] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/19_April_2011&action=edit 19] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/20_April_2011&action=edit 20] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/21_April_2011&action=edit 21] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/22_April_2011&action=edit 22] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/23_April_2011&action=edit 23] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/24_April_2011&action=edit 24]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/25_April_2011&action=edit 25] [http://2011.igem.org/Team:Amsterdam/26_April_2011 26] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/27_April_2011&action=edit 27] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/28_April_2011&action=edit 28] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/29_April_2011&action=edit 29] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/30_April_2011&action=edit 30]
May
MTWTFSS
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[http://2011.igem.org/Team:Amsterdam/2_May_2011 2] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/3_May_2011&action=edit 3] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/4_May_2011&action=edit 4] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/5_May_2011&action=edit 5] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/6_May_2011&action=edit 6] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/7_May_2011&action=edit 7] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/8_May_2011&action=edit 8]
[http://2011.igem.org/Team:Amsterdam/9_May_2011 9] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/10_May_2011&action=edit 10] [http://2011.igem.org/Team:Amsterdam/11_May_2011 11] [http://2011.igem.org/Team:Amsterdam/12_May_2011 12] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/13_May_2011&action=edit 13] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/14_May_2011&action=edit 14] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/15_May_2011&action=edit 15]
[http://2011.igem.org/Team:Amsterdam/16_May_2011 16] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/17_May_2011&action=edit 17] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/18_May_2011&action=edit 18] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/19_May_2011&action=edit 19] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/20_May_2011&action=edit 20] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/21_May_2011&action=edit 21] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/22_May_2011&action=edit 22]
[http://2011.igem.org/Team:Amsterdam/23_May_2011 23] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/24_May_2011&action=edit 24] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/25_May_2011&action=edit 25] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/26_May_2011&action=edit 26] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/27_May_2011&action=edit 27] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/28_May_2011&action=edit 28] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/29_May_2011&action=edit 29]
[http://2011.igem.org/Team:Amsterdam/30_May_2011 30] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/31_May_2011&action=edit 31]
June
MTWTFSS
    [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/1_June_2011&action=edit 1] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/2_June_2011&action=edit 2] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/3_June_2011&action=edit 3] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/4_June_2011&action=edit 4] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/5_June_2011&action=edit 5]
[http://2011.igem.org/Team:Amsterdam/6_June_2011 6] [http://2011.igem.org/Team:Amsterdam/7_June_2011 7] [http://2011.igem.org/Team:Amsterdam/8_June_2011 8] [http://2011.igem.org/Team:Amsterdam/9_June_2011 9] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/10_June_2011&action=edit 10] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/11_June_2011&action=edit 11] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/12_June_2011&action=edit 12]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/13_June_2011&action=edit 13] [http://2011.igem.org/Team:Amsterdam/14_June_2011 14] [http://2011.igem.org/Team:Amsterdam/15_June_2011 15] [http://2011.igem.org/Team:Amsterdam/16_June_2011 16] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/17_June_2011&action=edit 17] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/18_June_2011&action=edit 18] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/19_June_2011&action=edit 19]
[http://2011.igem.org/Team:Amsterdam/20_June_2011 20] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/21_June_2011&action=edit 21] [http://2011.igem.org/Team:Amsterdam/22_June_2011 22] [http://2011.igem.org/Team:Amsterdam/23_June_2011 23] [http://2011.igem.org/Team:Amsterdam/24_June_2011 24] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/25_June_2011&action=edit 25] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/26_June_2011&action=edit 26]
[http://2011.igem.org/Team:Amsterdam/27_June_2011 27] [http://2011.igem.org/Team:Amsterdam/28_June_2011 28] [http://2011.igem.org/Team:Amsterdam/29_June_2011 29] [http://2011.igem.org/Team:Amsterdam/30_June_2011 30]
July
MTWTFSS
        [http://2011.igem.org/Team:Amsterdam/1_July_2011 1] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/2_July_2011&action=edit 2] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/3_July_2011&action=edit 3]
[http://2011.igem.org/Team:Amsterdam/4_July_2011 4] [http://2011.igem.org/Team:Amsterdam/5_July_2011 5] [http://2011.igem.org/Team:Amsterdam/6_July_2011 6] [http://2011.igem.org/Team:Amsterdam/7_July_2011 7] [http://2011.igem.org/Team:Amsterdam/8_July_2011 8] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/9_July_2011&action=edit 9] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/10_July_2011&action=edit 10]
[http://2011.igem.org/Team:Amsterdam/11_July_2011 11] [http://2011.igem.org/Team:Amsterdam/12_July_2011 12] [http://2011.igem.org/Team:Amsterdam/13_July_2011 13] [http://2011.igem.org/Team:Amsterdam/14_July_2011 14] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/15_July_2011&action=edit 15] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/16_July_2011&action=edit 16] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/17_July_2011&action=edit 17]
[http://2011.igem.org/Team:Amsterdam/18_July_2011 18] [http://2011.igem.org/Team:Amsterdam/19_July_2011 19] [http://2011.igem.org/Team:Amsterdam/20_July_2011 20] [http://2011.igem.org/Team:Amsterdam/21_July_2011 21] [http://2011.igem.org/Team:Amsterdam/22_July_2011 22] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/23_July_2011&action=edit 23] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/24_July_2011&action=edit 24]
[http://2011.igem.org/Team:Amsterdam/25_July_2011 25] [http://2011.igem.org/Team:Amsterdam/26_July_2011 26] [http://2011.igem.org/Team:Amsterdam/27_July_2011 27] [http://2011.igem.org/Team:Amsterdam/28_July_2011 28] [http://2011.igem.org/Team:Amsterdam/29_July_2011 29] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/30_July_2011&action=edit 30] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/31_July_2011&action=edit 31]
August
MTWTFSS
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/1_August_2011&action=edit 1] [http://2011.igem.org/Team:Amsterdam/2_August_2011 2] [http://2011.igem.org/Team:Amsterdam/3_August_2011 3] [http://2011.igem.org/Team:Amsterdam/4_August_2011 4] [http://2011.igem.org/Team:Amsterdam/5_August_2011 5] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/6_August_2011&action=edit 6] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/7_August_2011&action=edit 7]
[http://2011.igem.org/Team:Amsterdam/8_August_2011 8] [http://2011.igem.org/Team:Amsterdam/9_August_2011 9] [http://2011.igem.org/Team:Amsterdam/10_August_2011 10] [http://2011.igem.org/Team:Amsterdam/11_August_2011 11] [http://2011.igem.org/Team:Amsterdam/12_August_2011 12] [http://2011.igem.org/Team:Amsterdam/13_August_2011 13] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/14_August_2011&action=edit 14]
[http://2011.igem.org/Team:Amsterdam/15_August_2011 15] [http://2011.igem.org/Team:Amsterdam/16_August_2011 16] [http://2011.igem.org/Team:Amsterdam/17_August_2011 17] [http://2011.igem.org/Team:Amsterdam/18_August_2011 18] [http://2011.igem.org/Team:Amsterdam/19_August_2011 19] [http://2011.igem.org/Team:Amsterdam/20_August_2011 20] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/21_August_2011&action=edit 21]
[http://2011.igem.org/Team:Amsterdam/22_August_2011 22] [http://2011.igem.org/Team:Amsterdam/23_August_2011 23] [http://2011.igem.org/Team:Amsterdam/24_August_2011 24] [http://2011.igem.org/Team:Amsterdam/25_August_2011 25] [http://2011.igem.org/Team:Amsterdam/26_August_2011 26] [http://2011.igem.org/Team:Amsterdam/27_August_2011 27] [http://2011.igem.org/Team:Amsterdam/28_August_2011 28]
[http://2011.igem.org/Team:Amsterdam/29_August_2011 29] [http://2011.igem.org/Team:Amsterdam/30_August_2011 30] [http://2011.igem.org/Team:Amsterdam/31_August_2011 31]
September
MTWTFSS
      [http://2011.igem.org/Team:Amsterdam/1_September_2011 1] [http://2011.igem.org/Team:Amsterdam/2_September_2011 2] [http://2011.igem.org/Team:Amsterdam/3_September_2011 3] [http://2011.igem.org/Team:Amsterdam/4_September_2011 4]
[http://2011.igem.org/Team:Amsterdam/5_September_2011 5] [http://2011.igem.org/Team:Amsterdam/6_September_2011 6] [http://2011.igem.org/Team:Amsterdam/7_September_2011 7] [http://2011.igem.org/Team:Amsterdam/8_September_2011 8] [http://2011.igem.org/Team:Amsterdam/9_September_2011 9] [http://2011.igem.org/Team:Amsterdam/10_September_2011 10] [http://2011.igem.org/Team:Amsterdam/11_September_2011 11]
[http://2011.igem.org/Team:Amsterdam/12_September_2011 12] [http://2011.igem.org/Team:Amsterdam/13_September_2011 13] [http://2011.igem.org/Team:Amsterdam/14_September_2011 14] [http://2011.igem.org/Team:Amsterdam/15_September_2011 15] [http://2011.igem.org/Team:Amsterdam/16_September_2011 16] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/17_September_2011&action=edit 17] [http://2011.igem.org/Team:Amsterdam/18_September_2011 18]
[http://2011.igem.org/Team:Amsterdam/19_September_2011 19] [http://2011.igem.org/Team:Amsterdam/20_September_2011 20] [http://2011.igem.org/Team:Amsterdam/21_September_2011 21] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/22_September_2011&action=edit 22] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/23_September_2011&action=edit 23] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/24_September_2011&action=edit 24] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/25_September_2011&action=edit 25]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/26_September_2011&action=edit 26] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/27_September_2011&action=edit 27] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/28_September_2011&action=edit 28] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/29_September_2011&action=edit 29] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/30_September_2011&action=edit 30]
October
MTWTFSS
          [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/1_October_2011&action=edit 1] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/2_October_2011&action=edit 2]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/3_October_2011&action=edit 3] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/4_October_2011&action=edit 4] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/5_October_2011&action=edit 5] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/6_October_2011&action=edit 6] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/7_October_2011&action=edit 7] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/8_October_2011&action=edit 8] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/9_October_2011&action=edit 9]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/10_October_2011&action=edit 10] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/11_October_2011&action=edit 11] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/12_October_2011&action=edit 12] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/13_October_2011&action=edit 13] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/14_October_2011&action=edit 14] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/15_October_2011&action=edit 15] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/16_October_2011&action=edit 16]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/17_October_2011&action=edit 17] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/18_October_2011&action=edit 18] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/19_October_2011&action=edit 19] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/20_October_2011&action=edit 20] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/21_October_2011&action=edit 21] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/22_October_2011&action=edit 22] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/23_October_2011&action=edit 23]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/24_October_2011&action=edit 24] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/25_October_2011&action=edit 25] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/26_October_2011&action=edit 26] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/27_October_2011&action=edit 27] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/28_October_2011&action=edit 28] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/29_October_2011&action=edit 29] [http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/30_October_2011&action=edit 30]
[http://2011.igem.org/wiki/index.php?title=Team:Amsterdam/31_October_2011&action=edit 31]


02-04-2011 Meeting 8

Funding

No letters received Sponsor letters to UvA and VU will be sent. Internship funding might be useful. Labyrinth tv will be contacted by supervisor Douwe Molenaar.

Projects discussion

Methane producing E.coli

Yuri talked with expert Martijn Bekker. Need to check if the trans-membrane protein is a problem:

  • Toxicity
  • Can methane be made from lactose?
  • Can methane be made from Acetyl-CoA?

Plastic degrading bacteria

  • It can be useful, but will it produce enough?
  • Could plastic be grown on food waste?

Opportunistic infections with AIDS

  • PAMPs are known,those can be used as targets
  • Different proteins show a good individual result while blasting
  • Look at Slovenia iGEM 2006

Neglected diseases

  • We don't use viruses
  • Parasites will be checked, but full-grown are to difficult

Signal transduction

  • Robustness
  • Signals in cells are noisy
  • Peter Swain is an expert on this
  • What application?

Chemotaxis

  • Examples: Influence flagella, Circadian rhythms influencing
  • Almhof is working on this
  • It has been used before in iGEM
  • Good idea: Let a bacteria take a molecule for transport
  • Size and precision?
  • Application?