Team:ETH Zurich/Modeling/References

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Can you feel the smoke tonight?

Modeling References

All of the previous work we included into our model is referenced here.

Single-Cell Model

	Source
[1]	Subhayu Basu, Yoram Gerchman, Cynthia H. Collins, Frances H. Arnold & Ron Weiss, A synthetic multicellular system for programmed pattern formation, Nature Vol. 434, 2005
[2]	Garcia-Ojalvo, Michael B. Elowitz, and Steven H. Strogatz, Modeling a synthetic multicellular clock: Repressilators coupled by quorum sensing, PNAS vol. 101 no. 30, 2004
[3]	MIT igem 2010
[4]	Michael Halter, Alex Tona, Kiran Bhadriraju, Anne L. Plant, John T. Elliott, Automated Live Cell Imaging of Green Fluorescent Protein Degradation in Individual Fibroblasts, Cytometry Part A, Volume 71A Issue 10, 2007
[5]	Weber W. et al, Gas-inducible transgene expression in mammalian cells and mice, Nature Biotechnology, volume 22, number 11, November 2004
[6]	Michalis Koutinas, Ming-Chi Lam, Alexandros Kiparissides, Rafael Silva-Rocha, Miguel Godinho, Andrew G. Livingston, Efstratios N. Pistikopoulos, Victor de Lorenzo, Vitor A. P. Martins dos Santos and Athanasios Mantalaris, The regulatory logic of m-xylene biodegradation by Pseudomonas putida mt-2 exposed by dynamic modelling of the principal node Ps/Pr of the TOL plasmid, Environmental Microbiology vol. 12, Issue 6, 2010
[7]	Development and Testing of a Bacterial Biosensor for Toluene-Based Environmental Contaminants

	Source
[8]	GSI Environmental Inc, Acetaldehyde, GSI Chemical Database
[9]	FIX ME Diffusion in Biofilms

	Source
[10]	FIX ME BRENDA Acetaldehyde Dehydrogenase
[11]	Clifford C. Shone, Herbert J. Fromm, Steady-state and pre-steady-state kinetics of coenzyme A-linked aldehyde dehydrogenase from Escherichia coli, Biochemistry, 1981, 20 (26), pp 7494–7501