"
Team:ETH Zurich/Modeling/Parameters
From 2011.igem.org
(Difference between revisions)
| Line 3: | Line 3: | ||
<table border="1" align="center"> | <table border="1" align="center"> | ||
<tr> | <tr> | ||
| - | <td> <b>Parameter</b> </td><td> Description </td><td> <b> | + | <td> <b>Parameter</b> </td><td> <b>Description</b> </td><td> <b>Value</b></td><td> <b>Reference</b></td> |
| - | </td></tr> | + | </tr> |
<tr align="left"> | <tr align="left"> | ||
| - | <td> d<sub>mRNA</sub> </td><td> mRNA degradation rate </td><td> 4.65 | + | <td> d<sub>mRNA</sub> </td><td> mRNA degradation rate </td><td> 4.65</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> d<sub>CI</sub> </td><td> CI degradation rate </td><td> 4.64 | + | <td> d<sub>CI</sub> </td><td> CI degradation rate </td><td> 4.64 </td></tr> |
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> a<sub>λp</sub> </td><td> transcription leakage of λp </td><td> 4.04 | + | <td> a<sub>λp</sub> </td><td> transcription leakage of λp </td><td> 4.04</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> α<sub>2</sub> </td><td> CI translation rate (RBS strength) </td><td> 1.06 | + | <td> α<sub>2</sub> </td><td> CI translation rate (RBS strength) </td><td> 1.06</td></tr> |
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> d<sub>TetR</sub> </td><td> TetR degradation rate </td><td> 0.53 | + | <td> d<sub>TetR</sub> </td><td> TetR degradation rate </td><td> 0.53</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> c<sub>λp</sub> </td><td> λp promoter strength </td><td> 0. | + | <td> c<sub>λp</sub> </td><td> λp promoter strength </td><td> 0.4</td></tr> |
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> α<sub>4</sub> </td><td> GFP translation rate (RBS strength) </td><td> 0.38 | + | <td> α<sub>4</sub> </td><td> GFP translation rate (RBS strength) </td><td> 0.38</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> c<sub>pTet</sub> </td><td> pTet promoter strength </td><td> 0. | + | <td> c<sub>pTet</sub> </td><td> pTet promoter strength </td><td> 0.3</td></tr> |
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> c<sub>pLac</sub> </td><td> pLac promoter strength </td><td> 0.22 | + | <td> c<sub>pLac</sub> </td><td> pLac promoter strength </td><td> 0.22</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> α<sub>1</sub> </td><td> TetR translation rate (RBS strength) </td><td> 0.14 | + | <td> α<sub>1</sub> </td><td> TetR translation rate (RBS strength) </td><td> 0.14</td></tr> |
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> a<sub>pTet</sub> </td><td> transcription leakage of pTet </td><td> 0.12 | + | <td> a<sub>pTet</sub> </td><td> transcription leakage of pTet </td><td> 0.12</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> d<sub>GFP</sub> </td><td> GFP degradation rate </td><td> 0.04 | + | <td> d<sub>GFP</sub> </td><td> GFP degradation rate </td><td> 0.04</td></tr> |
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> a<sub>pLac</sub> </td><td> transcription leakage of pLac </td><td> 0.00 | + | <td> a<sub>pLac</sub> </td><td> transcription leakage of pLac </td><td> 0.00</td></tr> |
| - | + | ||
| - | </td></tr> | + | |
<tr align="left"> | <tr align="left"> | ||
| - | <td> d<sub>LacI</sub> </td><td> LacI degradation rate </td><td> 0.00 | + | <td> d<sub>LacI</sub> </td><td> LacI degradation rate </td><td> 0.00</td></tr> |
| - | </td></tr> | + | |
</table> | </table> | ||
Revision as of 13:56, 9 September 2011
| Parameter | Description | Value | Reference |
| dmRNA | mRNA degradation rate | 4.65 | |
| dCI | CI degradation rate | 4.64 | |
| aλp | transcription leakage of λp | 4.04 | |
| α2 | CI translation rate (RBS strength) | 1.06 | |
| dTetR | TetR degradation rate | 0.53 | |
| cλp | λp promoter strength | 0.4 | |
| α4 | GFP translation rate (RBS strength) | 0.38 | |
| cpTet | pTet promoter strength | 0.3 | |
| cpLac | pLac promoter strength | 0.22 | |
| α1 | TetR translation rate (RBS strength) | 0.14 | |
| apTet | transcription leakage of pTet | 0.12 | |
| dGFP | GFP degradation rate | 0.04 | |
| apLac | transcription leakage of pLac | 0.00 | |
| dLacI | LacI degradation rate | 0.00 |
