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Team:Washington/Alkanes/Parts
From 2011.igem.org
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__NOTOC__ | __NOTOC__ | ||
| - | <center><big><big><big><big>Diesel Production: Parts Submitted</big></big></big></big></center><br><br> | + | <center><big><big><big><big>'''Diesel Production: Parts Submitted'''</big></big></big></big></center><br><br> |
The diesel production sub-team submitted many parts, but the below are our favorites along with a short description. The comprehensive list can be found on the [http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2011&group=Washington Parts Registry]. | The diesel production sub-team submitted many parts, but the below are our favorites along with a short description. The comprehensive list can be found on the [http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2011&group=Washington Parts Registry]. | ||
| - | ==Composite== | + | |
| + | =='''Composite'''== | ||
[http://partsregistry.org/Part:BBa_K590025 BBa_K590025 '''"The Petrobrick"'''] | [http://partsregistry.org/Part:BBa_K590025 BBa_K590025 '''"The Petrobrick"'''] | ||
| - | A modular and open platform for the biological production of diesel fuel. The Petrobrick consists of | + | A modular and open platform for the biological production of diesel fuel. The Petrobrick consists of [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590032 AAR] and [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590031 ADC], each behind a standard Elowitz RBS. All of this in psb1C3 regulated by a high constitutive promoter. |
[http://partsregistry.org/wiki/index.php?title=Part:BBa_K590026 BBa_K590026 '''ADC-PSB1C3-High constitutive'''] | [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590026 BBa_K590026 '''ADC-PSB1C3-High constitutive'''] | ||
| - | The aldehyde decarbonylase | + | The aldehyde decarbonylase behind a high constitutive promoter and an Elowitz RBS. This was an important negative control when testing for alkane production. |
[http://partsregistry.org/wiki/index.php?title=Part:BBa_K590027 BBa_K590027 '''AAR-PSB1C3-High consititutive'''] | [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590027 BBa_K590027 '''AAR-PSB1C3-High consititutive'''] | ||
| - | The acyl-ACP reductase | + | The acyl-ACP reductase behind a high constitutive promoter and an Elowitz RBS. This was an important negative control when testing for alkane production. |
| + | |||
| - | ==Coding== | + | =='''Coding'''== |
| - | [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590031 ''' | + | [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590031 BBa_K590031 '''Synechococcus elongatus PCC7942 Aldehyde Decarbonylase'''] |
| - | This part encodes an enzyme | + | This part encodes an enzyme Aldehyde Decarbonylase (ADC) that removes the carbonyl group (C=O) from a fatty aldehyde, yielding an alkane one carbon shorter than the original aldehyde and a molecule of formate. This part has been codon-optimized for ''E. coli''. |
| - | [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590032 ''' | + | [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590032 BBa_K590032 '''Acyl-ACP Reductase'''] |
This part encodes an enzyme that reduces cellular fatty acyl-ACPs, from the bacterial fatty acid biosynthesis pathway, into fatty aldehydes. This part has been codon optimized for ''E. coli''. | This part encodes an enzyme that reduces cellular fatty acyl-ACPs, from the bacterial fatty acid biosynthesis pathway, into fatty aldehydes. This part has been codon optimized for ''E. coli''. | ||
Latest revision as of 03:45, 28 September 2011
The diesel production sub-team submitted many parts, but the below are our favorites along with a short description. The comprehensive list can be found on the [http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2011&group=Washington Parts Registry].
Composite
[http://partsregistry.org/Part:BBa_K590025 BBa_K590025 "The Petrobrick"]
A modular and open platform for the biological production of diesel fuel. The Petrobrick consists of [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590032 AAR] and [http://partsregistry.org/wiki/index.php?title=Part:BBa_K590031 ADC], each behind a standard Elowitz RBS. All of this in psb1C3 regulated by a high constitutive promoter.
[http://partsregistry.org/wiki/index.php?title=Part:BBa_K590026 BBa_K590026 ADC-PSB1C3-High constitutive]
The aldehyde decarbonylase behind a high constitutive promoter and an Elowitz RBS. This was an important negative control when testing for alkane production.
[http://partsregistry.org/wiki/index.php?title=Part:BBa_K590027 BBa_K590027 AAR-PSB1C3-High consititutive]
The acyl-ACP reductase behind a high constitutive promoter and an Elowitz RBS. This was an important negative control when testing for alkane production.
Coding
[http://partsregistry.org/wiki/index.php?title=Part:BBa_K590031 BBa_K590031 Synechococcus elongatus PCC7942 Aldehyde Decarbonylase]
This part encodes an enzyme Aldehyde Decarbonylase (ADC) that removes the carbonyl group (C=O) from a fatty aldehyde, yielding an alkane one carbon shorter than the original aldehyde and a molecule of formate. This part has been codon-optimized for E. coli.
[http://partsregistry.org/wiki/index.php?title=Part:BBa_K590032 BBa_K590032 Acyl-ACP Reductase]
This part encodes an enzyme that reduces cellular fatty acyl-ACPs, from the bacterial fatty acid biosynthesis pathway, into fatty aldehydes. This part has been codon optimized for E. coli.
