Team:UNIPV-Pavia/Project/References

<ol type='1'>

<ol type='1'>

<li>Andersen JB, Sternberg C, Poulsen LK et al. (1998) <b>New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria.</b> <i> Appl. Environ. Microbiol.</i> 64(6):2240-6.  

<li>Andersen JB, Sternberg C, Poulsen LK et al. (1998) <b>New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria.</b> <i> Appl. Environ. Microbiol.</i> 64(6):2240-6.  

<li>Anderson JC, Dueber JE, Leguia M et al. (2010)

<li>Anderson JC, Dueber JE, Leguia M et al. (2010)

<b>BglBricks: A flexible standard for biological part assembly.</b> <i>J. Biol. Eng.</i> 20;4(1):1.

<b>BglBricks: A flexible standard for biological part assembly.</b> <i>J. Biol. Eng.</i> 20;4(1):1.

<li>Andrianantoandro E, Basu S, Karig DK et al. (2006) <b>Synthetic biology: new engineering rules for an emerging discipline.</b>  

<li>Andrianantoandro E, Basu S, Karig DK et al. (2006) <b>Synthetic biology: new engineering rules for an emerging discipline.</b>  

<i>Mol. Syst. Biol.</i> 2:2006.0028.

<i>Mol. Syst. Biol.</i> 2:2006.0028.

<li>Atkinson MR,Savageau MA, Myers JT et al. (2003) <b>Development of Genetic Circuitry Exhibiting Toggle Switch or Oscillatory Behavior in Escherichia coli. </b> <i>Cell. </i> 113(5):597-607.

<li>Atkinson MR,Savageau MA, Myers JT et al. (2003) <b>Development of Genetic Circuitry Exhibiting Toggle Switch or Oscillatory Behavior in Escherichia coli. </b> <i>Cell. </i> 113(5):597-607.

<li>Bassler BL (2002) <b>Small Talk: Cell-to-Cell Communication in Bacteria. </b> <i>Cell. </i> 109(4):421-4.

<li>Bassler BL (2002) <b>Small Talk: Cell-to-Cell Communication in Bacteria. </b> <i>Cell. </i> 109(4):421-4.

<li>Braun D, Basu S, Weiss R (2005) <b>Parameter estimation for two synthetic gene networks: a case study. </b> <i>Acoustics, Speech, and Signal Processing Proceedings.</i> IEEE International Conference. on vol.5, no., pp. v/769- v/772 Vol. 5, 18-23.  

<li>Braun D, Basu S, Weiss R (2005) <b>Parameter estimation for two synthetic gene networks: a case study. </b> <i>Acoustics, Speech, and Signal Processing Proceedings.</i> IEEE International Conference. on vol.5, no., pp. v/769- v/772 Vol. 5, 18-23.  

<li>Canton B, Labno A, Endy D. (2008) <b>Refinement and standardization of synthetic biological parts and devices. </b> <i> Nat Biotechnol. </i>  26(7):787-93.  

<li>Canton B, Labno A, Endy D. (2008) <b>Refinement and standardization of synthetic biological parts and devices. </b> <i> Nat Biotechnol. </i>  26(7):787-93.  

<li>Collins CH, Arnold FH, Leadbetter JR (2005)  

<li>Collins CH, Arnold FH, Leadbetter JR (2005)  

<b>Directed evolution of Vibrio fischeri LuxR for increased sensitivity to a broad spectrum of acyl-homoserine lactones.</b>  

<b>Directed evolution of Vibrio fischeri LuxR for increased sensitivity to a broad spectrum of acyl-homoserine lactones.</b>  

<i>Mol. Microbiol.</i> 55(3):712-23.

<i>Mol. Microbiol.</i> 55(3):712-23.

<li>Cox RS 3rd, Surette MG, Elowitz MB (2007) <b> Programming gene expression with combinatorial promoters. </b> <i> Mol. Syst. Biol. </i> 3:145.  

<li>Cox RS 3rd, Surette MG, Elowitz MB (2007) <b> Programming gene expression with combinatorial promoters. </b> <i> Mol. Syst. Biol. </i> 3:145.  

<br><br>

<br><br>

  <li>Danino T, Mondragón-Palomino O, Tsimring L et al. (2010) <b>A synchronized quorum of genetic clocks. </b> <i>Nature. </i>  463(7279):326-30.  

  <li>Danino T, Mondragón-Palomino O, Tsimring L et al. (2010) <b>A synchronized quorum of genetic clocks. </b> <i>Nature. </i>  463(7279):326-30.  

<li>De Lorimier RM, Smith JJ, Dwyer MA et al. (2002) <b>Construction of a fluorescent biosensor family. </b> <i>Protein Science. </i> 11:2655–2675.

<li>De Lorimier RM, Smith JJ, Dwyer MA et al. (2002) <b>Construction of a fluorescent biosensor family. </b> <i>Protein Science. </i> 11:2655–2675.

<li>Dong YH, Gusti AR, Zhang Q et al. (2002) <b>Identification ofquorum-quenching N-acyl homoserine lactonases from Bacillus species.</b>  

<li>Dong YH, Gusti AR, Zhang Q et al. (2002) <b>Identification ofquorum-quenching N-acyl homoserine lactonases from Bacillus species.</b>  

<i>Appl. Environ. Microbiol.</i> 68(4):1754-9.

<i>Appl. Environ. Microbiol.</i> 68(4):1754-9.

<li>Dong Y, Xu J, Li X et al. (2002) <b>AiiA, an enzyme that inactivates the acylhomoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia carotovora. </b> <i>Applied And Environmental Microbiology. </i> 68: 1754–1759.

<li>Dong Y, Xu J, Li X et al. (2002) <b>AiiA, an enzyme that inactivates the acylhomoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia carotovora. </b> <i>Applied And Environmental Microbiology. </i> 68: 1754–1759.

  <li>Endler L, Rodriguez N, Juty N et al. (2009) <b>Designing and encoding models for synthetic biology. </b> <i>J. R. Soc. Interface. </i> 6:S405-S417.  

  <li>Endler L, Rodriguez N, Juty N et al. (2009) <b>Designing and encoding models for synthetic biology. </b> <i>J. R. Soc. Interface. </i> 6:S405-S417.  

<li>Engebrecht J, Nealson K, Silverman M (1983) <b>Bacterial bioluminescence: isolation and genetic analysis of functions from Vibrio fischeri. </b> <i>Cell. </i> 32:773–81.

<li>Engebrecht J, Nealson K, Silverman M (1983) <b>Bacterial bioluminescence: isolation and genetic analysis of functions from Vibrio fischeri. </b> <i>Cell. </i> 32:773–81.

<li>Fuqua C, Greenberg EP (2002) <b>Listening in on bacteria: acyl- homoserine lactone signalling. </b> <i>Nat. Rev. Mol. Cell Biol. </i> 3: 685–695.

<li>Fuqua C, Greenberg EP (2002) <b>Listening in on bacteria: acyl- homoserine lactone signalling. </b> <i>Nat. Rev. Mol. Cell Biol. </i> 3: 685–695.

<li>Fussenegger M (2010) <b>Synthetic biology: Synchronized bacterial clocks.</b> <i>Nature.</i> 463(7279):301-2.

<li>Fussenegger M (2010) <b>Synthetic biology: Synchronized bacterial clocks.</b> <i>Nature.</i> 463(7279):301-2.

<li>Garcia-Ojalvo J, Elowitz MB, Strogatz SH (2004) <b>Modeling a synthetic multicellular

<li>Garcia-Ojalvo J, Elowitz MB, Strogatz SH (2004) <b>Modeling a synthetic multicellular

clock: repressilators coupled by quorum sensing.</b> <i>Proc. Natl. Acad. Sci. U.S.A. 2004</i> 101(30):10955-60.

clock: repressilators coupled by quorum sensing.</b> <i>Proc. Natl. Acad. Sci. U.S.A. 2004</i> 101(30):10955-60.

<li>Hanzelka BL, Stevens AM, Parsek MR et al. (1997)  

<li>Hanzelka BL, Stevens AM, Parsek MR et al. (1997)  

<b>Mutational analysis of the Vibrio fischeri LuxI polypeptide: critical regions of an autoinducer synthase.</b>  

<b>Mutational analysis of the Vibrio fischeri LuxI polypeptide: critical regions of an autoinducer synthase.</b>  

<i>J. Bacteriol.</i> 179(15):4882-7.

<i>J. Bacteriol.</i> 179(15):4882-7.

<li>Kelly JR, Rubin AJ, Davis JH et al. (2009) <b>Measuring the activity of BioBrick promoters using an in vivo reference standard.</b>  

<li>Kelly JR, Rubin AJ, Davis JH et al. (2009) <b>Measuring the activity of BioBrick promoters using an in vivo reference standard.</b>  

<i>J. Biol. Eng.</i> 3:4.

<i>J. Biol. Eng.</i> 3:4.

<li>Lutz R, Bujard H (1997) <b> Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. </b> <i>Nucleic Acids Res.</i> 25(6):1203-10.

<li>Lutz R, Bujard H (1997) <b> Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. </b> <i>Nucleic Acids Res.</i> 25(6):1203-10.

<li>McMillen D, Kopell N, Hasty J et al. (2002) <b>Synchronizing genetic relaxation oscillators by intercell signaling.</b>  

<li>McMillen D, Kopell N, Hasty J et al. (2002) <b>Synchronizing genetic relaxation oscillators by intercell signaling.</b>  

<i>Proc. Natl. Acad. Sci. U.S.A.</i> 99(2):679-84.

<i>Proc. Natl. Acad. Sci. U.S.A.</i> 99(2):679-84.

<li>Molina L, Constantinescu F, Micheal L et al. (2003) <b>Degradation of pathogen quorum-sensing molecules by soil bacteria: a preventive and curative biological control mechanism. </b> <i>FEMS Microbiology Ecology. </i>  45: 71-81.

<li>Molina L, Constantinescu F, Micheal L et al. (2003) <b>Degradation of pathogen quorum-sensing molecules by soil bacteria: a preventive and curative biological control mechanism. </b> <i>FEMS Microbiology Ecology. </i>  45: 71-81.

<li>Pasotti L, Quattrocelli M, Galli D et al. (2011) <b>Multiplexing and demultiplexing logic functions for computing signal processing tasks in synthetic biology. </b> <i>Biotechnol. J. </i>6(7):784-95.  

<li>Pasotti L, Quattrocelli M, Galli D et al. (2011) <b>Multiplexing and demultiplexing logic functions for computing signal processing tasks in synthetic biology. </b> <i>Biotechnol. J. </i>6(7):784-95.  

<li>Shaefer AL, Hanzelka BL, Eberhard A et al. (1996) <b>Quorum Sensing in Vibrio fischeri: Probing Autoinducer-LuxR Interactions with Autoinducer Analogs. </b> <i>Journal Of Bacteriology. </i> 178 (10): 2897-2901.

<li>Shaefer AL, Hanzelka BL, Eberhard A et al. (1996) <b>Quorum Sensing in Vibrio fischeri: Probing Autoinducer-LuxR Interactions with Autoinducer Analogs. </b> <i>Journal Of Bacteriology. </i> 178 (10): 2897-2901.

<li>Sleight SC, Bartley BA, Lieviant JA et al. (2010) <b>Designing and engineering evolutionary robust genetic circuits. </b> <i>J. Biol. Eng. </i>4:12.

<li>Sleight SC, Bartley BA, Lieviant JA et al. (2010) <b>Designing and engineering evolutionary robust genetic circuits. </b> <i>J. Biol. Eng. </i>4:12.

<li>Thomas PW, Stone EM, Costello AL et al. (2005) <b>The quorum-quenching lactonase from Bacillus thuringiensis is a metalloprotein.</b>  

<li>Thomas PW, Stone EM, Costello AL et al. (2005) <b>The quorum-quenching lactonase from Bacillus thuringiensis is a metalloprotein.</b>  

<i>Biochemistry.</i> 44(20):7559-69.

<i>Biochemistry.</i> 44(20):7559-69.

<li>Wang LH, Weng LX, Dong YH et al. (2004)  

<li>Wang LH, Weng LX, Dong YH et al. (2004)  

<b>Specificity and enzyme kinetics of the quorum-quenching N-Acyl homoserine lactone lactonase (AHL-lactonase).</b>  

<b>Specificity and enzyme kinetics of the quorum-quenching N-Acyl homoserine lactone lactonase (AHL-lactonase).</b>  

<i>J. Biol. Chem.</i>279(14):13645-51.

<i>J. Biol. Chem.</i>279(14):13645-51.

<li>Waters C.M., Bonnie L (2005) <b>Quorum Sensing: Cell-to-Cell Communication in Bacteria. </b> <i>Annu. Rev. Cell Dev. Biol. </i> 21:319–46.

<li>Waters C.M., Bonnie L (2005) <b>Quorum Sensing: Cell-to-Cell Communication in Bacteria. </b> <i>Annu. Rev. Cell Dev. Biol. </i> 21:319–46.

<li>You L, Cox RS 3rd, Weiss R et al. (2004) <b>Programmed population control by cell-cell communication and regulated killing.</b>  

<li>You L, Cox RS 3rd, Weiss R et al. (2004) <b>Programmed population control by cell-cell communication and regulated killing.</b>  

<i>Nature.</i> 428(6985):868-71.  

<i>Nature.</i> 428(6985):868-71.  

</ol>

</ol>

</div>

</div>

</html>

</html>

{{end}}

{{end}}