Team:Edinburgh/Links

From 2011.igem.org

(Difference between revisions)
(Genomics)
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===Genomics===
===Genomics===
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* [http://www.ebi.ac.uk/Tools/emboss/transeq/ Transeq] (nucleotide to protein conceptual translation)
 
* [http://blast.ncbi.nlm.nih.gov/Blast.cgi BLAST: Basic Local Alignment Search Tool]
* [http://blast.ncbi.nlm.nih.gov/Blast.cgi BLAST: Basic Local Alignment Search Tool]
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* [http://www.ebi.ac.uk/Tools/psa/ EMBOSS Needle] (and other pairwise alignment tools)
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* [http://en.wikipedia.org/wiki/DNA_codon_table Codon Table]
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* [http://tools.neb.com/NEBcutter2/index.php NEBcutter] (finds restriction sites; also finds ORFs if they start with M)
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* [http://genepool.bio.ed.ac.uk/sanger/Sanger_troubleshooting_guide_v1.pdf GenePool: Sanger Sequencing Troubleshooting]
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* [http://www.bioinformatics.org/sms/rev_comp.html Reverse Complement]
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* [http://www.uniprot.org/ UniProt]
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* [http://www.ebi.ac.uk/ EMBL]
* [http://www.ebi.ac.uk/ EMBL]
* [http://www.ncbi.nlm.nih.gov/sites/gquery Entrez]
* [http://www.ncbi.nlm.nih.gov/sites/gquery Entrez]
 +
* [http://tools.neb.com/NEBcutter2/index.php NEBcutter] (finds restriction sites; also finds ORFs if they start with M)
 +
* [http://www.ebi.ac.uk/Tools/psa/ Needle] (and other pairwise alignment tools)
 +
* [http://www.bioinformatics.org/sms/rev_comp.html Reverse Complement]
 +
* [http://genepool.bio.ed.ac.uk/sanger/Sanger_troubleshooting_guide_v1.pdf GenePool: Sanger Sequencing Troubleshooting]
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* [http://www.cbs.dtu.dk/services/SignalP/ SignalP]
* [http://www.straininfo.net/ StrainInfo]
* [http://www.straininfo.net/ StrainInfo]
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* [http://www.ebi.ac.uk/Tools/emboss/transeq/ Transeq] (nucleotide to protein conceptual translation)
 +
* [http://www.uniprot.org/ UniProt]
===iGEM===
===iGEM===

Revision as of 20:19, 12 January 2012

Links

Useful information/tools, many of which we used regularly, can be found on the following pages:

Contents

Biology methods

Genomics

iGEM

Software

Misc