Team:Bielefeld-Germany/Black-box

From 2011.igem.org

(Difference between revisions)
(Beacon Box)
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[[File:Bielefeld-Germany-2011-Paper_Pattern.png|200px|thumb|rigth|Beacon Box paper pattern]]
[[File:Bielefeld-Germany-2011-Paper_Pattern.png|200px|thumb|rigth|Beacon Box paper pattern]]
[[File:Bielefeld-Germany2011-circuitboard.png|200px|thumb|right|circuit board]]
[[File:Bielefeld-Germany2011-circuitboard.png|200px|thumb|right|circuit board]]
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Due to give the audience of our Science Cafe-talk an impression of the molecular beacon reaction we constructed an Beacon Box. The box has an easy design and can be rebuild at home, just some basic skills in handicrafting and electrical engineering are necessary.  
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Due to give the audience of our Science Cafe-talk an impression of the molecular beacon reaction we constructed a "Beacon Box". The box has an easy design and can be rebuilt at home, just some basic skills in handicraft and electrical engineering are necessary.  
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*three blue <html><span id="igem-tooltip" style="font-size:12px;"><a href="http://www.led1.de/shop/lng/en/standard-leds/led-3mm-ultra-bright/led-3mm-blue-6000mcd-webbl06-cs.html?type=N&language=en" title="WEBBL06-CS by Winger Electronics GmbH & Co.KG:<br/> 3.2 mV,<br/> 20 mA,<br/> 0.1 W,<br/> 6000 mcd,<br/> 470 nm,<br/> 96% color purity">LEDs</a></span></html>  
*three blue <html><span id="igem-tooltip" style="font-size:12px;"><a href="http://www.led1.de/shop/lng/en/standard-leds/led-3mm-ultra-bright/led-3mm-blue-6000mcd-webbl06-cs.html?type=N&language=en" title="WEBBL06-CS by Winger Electronics GmbH & Co.KG:<br/> 3.2 mV,<br/> 20 mA,<br/> 0.1 W,<br/> 6000 mcd,<br/> 470 nm,<br/> 96% color purity">LEDs</a></span></html>  
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Now you can solder the parts to the board according to the circuit diagram. You want to attach the three LEDs in close range to each other to reduce scattering.
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Now you can solder the parts to the board according to the circuit diagram. You need to attach the three LEDs in close range to each other to reduce scattering.
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The next part is to build the box itself. Cut out the box from solid paper according to the paper pattern. The position for the opening in the lid and the opening for the switch depend on your circuit board design. Fold the Box at the grey lines of the paper pattern and firmly crease the folds. Now you need to fold up the side parts of the box and glue the overlapping ends to the inner side of the adjacent side part.
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The next part is to build the box itself. Cut out the box from solid paper according to the paper pattern. The position for the opening in the lid and the opening for the switch depend on your circuit board design. Fold the Beacon Box at the grey lines of the paper pattern and firmly crease the folds. Now you need to fold up the side parts of the box and glue the overlapping ends to the inner side of the adjacent side part.
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The following part is the construction of the cone, that you put over the LEDs on your board. Cut out a quarter circle. You migth use leftover paper from your Box. Now roll up the paper to a cone (smooth the paper on a edge of your desk beforhand) and cut of the top. The cone is supposed to be put over the LEDs, so the diameter of the base needs to be large enough, but to reduce the scattering the diameter also needs to be as small as possible. Later on a PCR-tube is plugged on the top of the cone, so firstly the the cone mustn't be to high (it still needs to have enough space for attaching and removing the tube). Secondly the cone must be of the rigth diameter at the cutoff side, so a PCR-tube stays attached to the cone while the cone is upside down.  
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The following part is the construction of the cone, that you put over the LEDs on your board. Cut out a quarter circle. You migth use leftover paper from your box. Now roll up the paper to a cone (smooth the paper on an edge of your desk beforehand) and cut of the top. The cone is supposed to be put over the LEDs, so the diameter of the base needs to be large enough, but to reduce the scattering the diameter also needs to be as small as possible. Later on, a PCR-tube is plugged on the top of the cone, so firstly the cone mustn't be too high (it still needs to have enough space for attaching and removing the tube). Secondly the cone must be of the right diameter at the cutoff side, so a PCR-tube stays attached to the cone while the cone is upside down.  
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Next you attach the circuit bord to your box, add molecular beacons and target to a PCR-tube with molecular beacons and targets and attach it to the cone. Close the lid of the box, switch on the LEDs and look through the opening in the lid. The green shimmering in the tube is what you want to see.
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Next you attach the circuit board to your box, add molecular beacons and target to a PCR-tube and attach it to the cone. Close the lid of the box, switch on the LEDs and look through the opening in the lid. The green shimmering in the tube is what you want to see - fluorescent molecular beacons in their opened state.

Revision as of 09:38, 21 September 2011

Beacon Box

circuit diagram for the beacon box circuit board
Beacon Box paper pattern
circuit board

Due to give the audience of our Science Cafe-talk an impression of the molecular beacon reaction we constructed a "Beacon Box". The box has an easy design and can be rebuilt at home, just some basic skills in handicraft and electrical engineering are necessary.


First of you need to obtain the electronic equipment:

  • circuit board and some wires
  • soldering iron and soldering wire
  • power source (9V) and switch
  • electrical resistance 330 Ω
  • three blue LEDs

Now you can solder the parts to the board according to the circuit diagram. You need to attach the three LEDs in close range to each other to reduce scattering.


The next part is to build the box itself. Cut out the box from solid paper according to the paper pattern. The position for the opening in the lid and the opening for the switch depend on your circuit board design. Fold the Beacon Box at the grey lines of the paper pattern and firmly crease the folds. Now you need to fold up the side parts of the box and glue the overlapping ends to the inner side of the adjacent side part.


The following part is the construction of the cone, that you put over the LEDs on your board. Cut out a quarter circle. You migth use leftover paper from your box. Now roll up the paper to a cone (smooth the paper on an edge of your desk beforehand) and cut of the top. The cone is supposed to be put over the LEDs, so the diameter of the base needs to be large enough, but to reduce the scattering the diameter also needs to be as small as possible. Later on, a PCR-tube is plugged on the top of the cone, so firstly the cone mustn't be too high (it still needs to have enough space for attaching and removing the tube). Secondly the cone must be of the right diameter at the cutoff side, so a PCR-tube stays attached to the cone while the cone is upside down.


Next you attach the circuit board to your box, add molecular beacons and target to a PCR-tube and attach it to the cone. Close the lid of the box, switch on the LEDs and look through the opening in the lid. The green shimmering in the tube is what you want to see - fluorescent molecular beacons in their opened state.


left side: PCR-tube filled with molecular beacons and targets; rigth side: PCR tube filled with water