Team:Johns Hopkins/Project/PromUTR

From 2011.igem.org

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(Promoters and UTRs)
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======Promoters and UTRs======
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As we began our work with ''Saccharomyces cerevisiae'', it came to our attention that the database is deficient in genes for this organism. This deficiency is due in part to the fact that ''E. coli'' genes are widespread through the database, whereas yeast remains a largely untapped area. In order to address this problem and facilitate the use of yeast in synthetic biology we have decided to provide the basic parts required for gene use and assembly. We constructed some basic parts including promoters and termination sequences of varying strengths. This will allow future teams the ease of use of premade biobricked sequences to use with their genes.
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The iGEM registry is lacking in promoter and terminators sequences for yeast, especially when compared with the number available for use in ''E. coli''. In order to address this problem and increase the use of yeast in synthetic biology we have decided to provide a library of promoter and terminator sequences from 12 yeast genes: 4 causing high expression, 4 causing medium expression, and 4 causing low expression. We hope these BioBrick compatible parts will make it easier for future iGEM teams to work with ''Saccharomyces cerevisiae''.
======Promoters======
======Promoters======

Revision as of 05:23, 28 September 2011

VitaYeast - Johns Hopkins University, iGEM 2011

Promoters and UTRs

The iGEM registry is lacking in promoter and terminators sequences for yeast, especially when compared with the number available for use in E. coli. In order to address this problem and increase the use of yeast in synthetic biology we have decided to provide a library of promoter and terminator sequences from 12 yeast genes: 4 causing high expression, 4 causing medium expression, and 4 causing low expression. We hope these BioBrick compatible parts will make it easier for future iGEM teams to work with Saccharomyces cerevisiae.

Promoters

Yeast promoter sequences of varying strength have been provided for our work. The following are the available promoters:

RPS8Bp BAP2p FCY2p Gal 1/10p HHO1p
KRE9p PRY1p STM1p TDH3p RPS2p
UTRs

Similarly, the following UTRs, or termination sequences have been provided for our work:

ARD1utr BAP2utr FCY2utr HHo1utr KRE9utr
PRY1utr RPL8Autr RPL24Autr RPS2utr RPS8Butr
TDH3utr