Team:Arizona State/Templates/cas table

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Name [62] Name [13] Name[23] I-A I-B I-C I-D I-E I-F II-A II-B III-A III-B I-U III-U U COG TIGR Ramp [62] cascade-like complex [62] putative function grouping [71]
cas_HTH
cas1 cas1 cas1 y y y y y y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1518 1518] Nuclease [72]
cas10 cmr2 y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1353 1353] y Polymerase [72]
cas10 csm1 y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1353 1353] y Polymerase [72]
cas10 csx11 y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1353 1353] y Polymerase [72]
cas10d csc3 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1353 1353] y
cas2 cas2 cas2 y y y y y y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1343 1343], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3512 3512]
cas3' cas3 cas3 y y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1203 1203] Helicase, nuclease [13]
cas3 y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2254 2254]
cas4 cas4 y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1468 1468] RecB exonuclease [72][73]
cas4 csa1 y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1468 1468] RecB exonuclease [72][73]
cas5 cas5d casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas5 cas5e casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas5 cas5h casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas5 cas5t casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas5 cmx5 casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas5 csa5a casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas5 csa5p casD y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1688 1688] y y N-terminal domain [13], crRNA processing [62] cas5
cas6 cas6 y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1583 1583], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5551 5551] y crRNA processing [62] cas6
cas6 cmx6 y y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1583 1583], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5551 5551] y crRNA processing [62] cas6
cas6e cse3 casE y y crRNA processing [62] cas6
cas6f csy4 y y crRNA processing [62] cas6
cas7 csa2 casC y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1857 1857], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3649 3649] y y Regulation [13] cas7
cas7 csd2 casC y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1857 1857], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3649 3649] y y Regulation [13] cas7
cas7 cse4 casC y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1857 1857], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3649 3649] y y Regulation [13] cas7
cas7 csh2 casC y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1857 1857], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3649 3649] y y Regulation [13] cas7
cas7 csp1 casC y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1857 1857], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3649 3649] y y Regulation [13] cas7
cas7 cst2 casC y y y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1857 1857], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3649 3649] y y Regulation [13] cas7
cas8a1 CXXC-CXXC y y
cas8a1 cmx1 y y
cas8a1 cst1 y y
cas8a1 csx13 y y
cas8a1 csx8 y y
cas8a2 csa4 y y
cas8a2 csx9 y y
cas8b TM1802 y y
cas8b csh1 y y
cas8c csd1 y y
cas8c csp2 y y
cas9 csn1 y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3513 3513] HNH endonuclease [13]
cas9 csx12 y y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3513 3513] HNH endonuclease [13]
cmr1 cmr1 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1367 1367] y y cas7
cmr3 cmr3 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1769 1769] y y cas5
cmr4 cmr4 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1336 1336] y y cas7
cmr5 cmr5 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3337 3337] y
cmr6 cmr6 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1604 1604] y y cas7
csa5 csa5 y y
csaX csaX y
csb1 GSU0053 y y
csb2 y y
csb3 y y
csc1 csc1 y y cas5
csc2 csc2 [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1337 1337] y y cas7
cse1 cse1 casA y y
cse2 cse2 casB y y
csf1 csf1 y
csf2 csf2 y y cas7
csf3 csf3 y y
csf4 csf4 y
csm2 csm2 y y
csm3 csc2 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1337 1337] y y cas7
csm3 csm3 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1337 1337] y y cas7
csm4 csm4 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1567 1567] y y cas5
csm5 csm5 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1332 1332] y y cas7
csm6 APE2256 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517] transctiption regulation [62]
csm6 csm6 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517] transctiption regulation [62]
csn2 csn2 y
csx1 DXTHG y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4006 4006] Helix-turn-helix, transcription regulation [13]
csx1 NE0113 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4006 4006] Helix-turn-helix, transcription regulation [13]
csx1 TIGR02710 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4006 4006] Helix-turn-helix, transcription regulation [13]
csx1 csa3 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4006 4006] Helix-turn-helix, transcription regulation [13]
csx1 csx1 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4006 4006] Helix-turn-helix, transcription regulation [13]
csx1 csx2 y [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 1517], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4006 4006] Helix-turn-helix, transcription regulation [13]
csx10 csx10 y y
csx14 y
csx15
csx16 VVA1548 y
csx17 y
csx3 csx3 y
csy1 csy1 y y
csy2 csy2 y y y cas5
csy3 csy3 y y cas7
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