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  • Acknowledgements →
    • Host laboratory
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• Designs
  • Designs overview & concepts
  • Designs list
• Modeling
  • General overview
  • Modeling results for our designs →
    • The basics
    • Our assumptions
    • T7 polymerase diffusion
    • tRNA diffusion
    • ComK/ComS system
    • Parameters
  • Results of our passive diffusion model
  • Toward assisted diffusion
• Data
• Results
  • Achievements
  • Methodologies →
    • Microscopy
    • Micro-fluidic
    • Integration in B.subtilis
    • Kinetics
  • Parts list
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• Human practice & Safety
  • Human practice
  • Safety
  • Brainstorming
  • Bonus track

Modeling

Direct observation

Characterization

Relevant parameters for modeling

Allosteric equations for modeling

T7 system

First T7 model without delay between receptor and amplifier

T7 model with delay between receptor and amplifier

tRNA amber system

The amber suppressor tRNA diffusion.

Master/Slave

Bi-directional communication