Team:UPO-Sevilla/test

From 2011.igem.org

(Difference between revisions)
Line 3: Line 3:
<html>
<html>
                     <div id="principal">
                     <div id="principal">
-
                        <div class="main">
 
-
 
                         <ul id="breadcrumbs" class="xbreadcrumbs">
                         <ul id="breadcrumbs" class="xbreadcrumbs">
Line 17: Line 15:
                             <h1>Data Page</h1>
                             <h1>Data Page</h1>
                              
                              
-
<style type="text/css">
 
-
        .dataPage{width:700px; height:475px; background: url(https://static.igem.org/mediawiki/2011/f/f0/UPOSevillaTn7DataPage.png);}
 
-
              .tour_Tn7R{
 
-
  border: 3px solid transparent;
 
-
    bottom: 0;
 
-
    display: inline-block;
 
-
    height: 2em;
 
-
    left: 5.5em;
 
-
    position: relative;
 
-
    width: 4.7em;}
 
-
.tour_FRT{    border: 3px solid transparent;
 
-
    bottom: 0;
 
-
    display: inline-block;
 
-
    height: 2em;
 
-
    left: 5.5em;
 
-
    position: relative;
 
-
    width: 2em}
 
-
.tour_antib{    border: 3px solid transparent;
 
-
    bottom: 0;
 
-
    display: inline-block;
 
-
    height: 2em;
 
-
    left: 3.5em;
 
-
    position: relative;
 
-
    width: 4em}
 
-
        .tour_your_bioBrick{
 
-
    border: 3px solid transparent;
 
-
    bottom: 0;
 
-
    display: inline-block;
 
-
    height: 2em;
 
-
    left: 5em;
 
-
    position: relative;
 
-
    width: 6.5em;}
 
-
  .tour_R6K_origin{
 
-
    border: 3px solid transparent;
 
-
    bottom: 2em;
 
-
    display: inline-block;
 
-
    height: 1em;
 
-
    position: relative;
 
-
    right: 14.5em;
 
-
    top: 3em;
 
-
    width: 6.7em;}
 
-
        .tour_oriT{    border: 3px solid transparent;
 
-
    display: inline-block;
 
-
    height: 1em;
 
-
    left: -8.5em;
 
-
    position: relative;
 
-
    top: 3em;
 
-
    width: 4em;}
 
-
.tour_Transposase_action{ 
 
-
    border: 3px solid transparent;
 
-
    display: inline-block;
 
-
    height: 2em;
 
-
    left: -0.5em;
 
-
    position: relative;
 
-
    top: 3em;
 
-
    width: 4.7em;}
 
-
.tour_Flp_recombinase_action{
 
-
    border: 3px solid transparent;
 
-
    display: inline-block;
 
-
    height: 4em;
 
-
    left: 17.5em;
 
-
    position: relative;
 
-
    top: 11em;
 
-
    width: 6.7em;}
 
-
.tour_final_cartoon{ 
 
-
    border: 3px solid transparent;
 
-
    display: inline-block;
 
-
    height: 4em;
 
-
    left: -1.5em;
 
-
    position: relative;
 
-
    top: 12em;
 
-
    width: 4.7em;}
 
-
</style>
 
-
<div class="wrapper">
 
-
<div class="content">
 
-
 
-
                            <div class="dataPage">
 
-
                              <div class="tour_Tn7R"></div>
 
-
 
-
                              <div class="tour_FRT"></div>
 
-
 
-
                              <div class="tour_antib"></div>
 
-
 
-
                              <div class="tour_your_bioBrick"></div>
 
-
 
-
                              <div class="tour_R6K_origin"></div>
 
-
 
-
                              <div class="tour_oriT"></div>
 
-
 
-
                              <div class="tour_Transposase_action"></div>
 
-
 
 
-
      <div class="tour_Flp_recombinase_action"></div>
 
-
 
-
      <div class="tour_final_cartoon"></div>
 
-
                </div>
 
-
</div>
 
-
</div>
 
-
 
-
<!-- The JavaScript -->
 
-
      <script src="https://2011.igem.org/Team:UPO-Sevilla/js/jqueryeasing.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
 
-
        <script type="text/javascript">
 
-
$(function() {
 
-
/*
 
-
the json config obj.
 
-
name: the class given to the element where you want the tooltip to appear
 
-
bgcolor: the background color of the tooltip
 
-
color: the color of the tooltip text
 
-
text: the text inside the tooltip
 
-
time: if automatic tour, then this is the time in ms for this step
 
-
position: the position of the tip. Possible values are
 
-
TL top left
 
-
TR  top right
 
-
BL  bottom left
 
-
BR  bottom right
 
-
LT  left top
 
-
LB  left bottom
 
-
RT  right top
 
-
RB  right bottom
 
-
T  top
 
-
R  right
 
-
B  bottom
 
-
L  left
 
-
*/
 
-
var config = [
 
-
{
 
-
"name" : "tour_Tn7R",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"position" : "T",
 
-
"text" : "Tn7R & Tn7L: ends of Tn7 transposon, required for transposition. They are recognized by the transposase machinery, which will transpose any sequence located between these two motifs.",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_FRT",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "FRT: Flp recombinase target sites, required for excision of the resistance cassette.",
 
-
"position" : "T",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_antib",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "Antibiotic resistance cassette for selection of strains bearing transposon insertions. After that it can be removed by site-specific recombination at the flanking FRT sites.",
 
-
"position" : "T",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_your_bioBrick",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "Your BioBrick: You can use the BioBrick cloning site to clone the part(s) you wish to insert at the microbial genome.",
 
-
"position" : "T",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_R6K_origin",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"position" : "T",
 
-
"text" : "R6K origin: replication origin only active in pir+ E. coli strains.",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_oriT",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "oriT: transference origin for conjugation purposes.",
 
-
"position" : "T",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_Transposase_action",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "Transposase action: The transient expression of the transposase complex causes single site-specific genome integration at the attTn7 site.",
 
-
"position" : "T",
 
-
"time" : 5000
 
-
},
 
-
{
 
-
"name" : "tour_Flp_recombinase_action",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "Flp recombinase action: The transient expression of Flp recombinase or Flipase induces recombination between FRT sites, removing the resistance cassette between them.",
 
-
"position" : "T",
 
-
"time" : 5000
 
-
},
 
-
                    {
 
-
"name" : "tour_final_cartoon",
 
-
"bgcolor" : "white",
 
-
"color" : "black",
 
-
"text" : "Finally you can insert your BioBrick into of a new strain of bacterium without plasmid limitations or antibiotic resistance disadvantages.",
 
-
"position" : "B",
 
-
"time" : 5000
 
-
}
 
-
 
-
],
 
-
//define if steps should change automatically
 
-
autoplay = false,
 
-
//timeout for the step
 
-
showtime,
 
-
//current step of the tour
 
-
step = 0,
 
-
//total number of steps
 
-
total_steps = config.length;
 
-
 
-
//show the tour controls
 
-
showControls();
 
-
 
-
/*
 
-
we can restart or stop the tour,
 
-
and also navigate through the steps
 
-
*/
 
-
$('#activatetour').live('click',startTour);
 
-
$('#canceltour').live('click',endTour);
 
-
$('#endtour').live('click',endTour);
 
-
$('#restarttour').live('click',restartTour);
 
-
$('#nextstep').live('click',nextStep);
 
-
$('#prevstep').live('click',prevStep);
 
-
 
-
function startTour(){
 
-
$('#activatetour').remove();
 
-
$('#endtour,#restarttour').show();
 
-
if(!autoplay)
 
-
                                          if(total_steps > 1)
 
-
$('#nextstep').show();
 
-
showOverlay();
 
-
nextStep();
 
-
}
 
-
 
-
function nextStep(){
 
-
if(!autoplay){
 
-
if(step > 0)
 
-
$('#prevstep').show();
 
-
else
 
-
$('#prevstep').hide();
 
-
if(step == total_steps-1)
 
-
$('#nextstep').hide();
 
-
else
 
-
$('#nextstep').show();
 
-
}
 
-
if(step >= total_steps){
 
-
//if last step then end tour
 
-
endTour();
 
-
return false;
 
-
}
 
-
++step;
 
-
showTooltip();
 
-
}
 
-
 
-
function prevStep(){
 
-
if(!autoplay){
 
-
if(step > 2)
 
-
$('#prevstep').show();
 
-
else
 
-
$('#prevstep').hide();
 
-
if(step == total_steps)
 
-
$('#nextstep').show();
 
-
}
 
-
if(step <= 1)
 
-
return false;
 
-
--step;
 
-
showTooltip();
 
-
}
 
-
 
-
function endTour(){
 
-
step = 0;
 
-
if(autoplay) clearTimeout(showtime);
 
-
removeTooltip();
 
-
hideControls();
 
-
hideOverlay();
 
-
}
 
-
 
-
function restartTour(){
 
-
step = 0;
 
-
if(autoplay) clearTimeout(showtime);
 
-
nextStep();
 
-
}
 
-
 
-
function showTooltip(){
 
-
//remove current tooltip
 
-
removeTooltip();
 
-
 
-
var step_config = config[step-1];
 
-
var $elem = $('.' + step_config.name);
 
-
 
-
if(autoplay)
 
-
showtime = setTimeout(nextStep,step_config.time);
 
-
 
-
var bgcolor = step_config.bgcolor;
 
-
var color = step_config.color;
 
-
 
-
var $tooltip = $('<div>',{
 
-
id : 'tour_tooltip',
 
-
className : 'tooltip',
 
-
html : '<p>'+step_config.text+'</p><span class="tooltip_arrow"></span>'
 
-
}).css({
 
-
'display' : 'none',
 
-
'background-color' : bgcolor,
 
-
'color' : color
 
-
});
 
-
 
-
//position the tooltip correctly:
 
-
 
-
//the css properties the tooltip should have
 
-
var properties = {};
 
-
 
-
var tip_position = step_config.position;
 
-
 
-
//append the tooltip but hide it
 
-
$('BODY').prepend($tooltip);
 
-
 
-
//get some info of the element
 
-
var e_w = $elem.outerWidth();
 
-
var e_h = $elem.outerHeight();
 
-
var e_l = $elem.offset().left;
 
-
var e_t = $elem.offset().top;
 
-
 
-
 
-
switch(tip_position){
 
-
case 'TL' :
 
-
properties = {
 
-
'left' : e_l,
 
-
'top' : e_t + e_h + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_TL');
 
-
break;
 
-
case 'TR' :
 
-
properties = {
 
-
'left' : e_l + e_w - $tooltip.width() + 'px',
 
-
'top' : e_t + e_h + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_TR');
 
-
break;
 
-
case 'BL' :
 
-
properties = {
 
-
'left' : e_l + 'px',
 
-
'top' : e_t - $tooltip.height() + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_BL');
 
-
break;
 
-
case 'BR' :
 
-
properties = {
 
-
'left' : e_l + e_w - $tooltip.width() + 'px',
 
-
'top' : e_t - $tooltip.height() + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_BR');
 
-
break;
 
-
case 'LT' :
 
-
properties = {
 
-
'left' : e_l + e_w + 'px',
 
-
'top' : e_t + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_LT');
 
-
break;
 
-
case 'LB' :
 
-
properties = {
 
-
'left' : e_l + e_w + 'px',
 
-
'top' : e_t + e_h - $tooltip.height() + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_LB');
 
-
break;
 
-
case 'RT' :
 
-
properties = {
 
-
'left' : e_l - $tooltip.width() + 'px',
 
-
'top' : e_t + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_RT');
 
-
break;
 
-
case 'RB' :
 
-
properties = {
 
-
'left' : e_l - $tooltip.width() + 'px',
 
-
'top' : e_t + e_h - $tooltip.height() + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_RB');
 
-
break;
 
-
case 'T' :
 
-
properties = {
 
-
'left' : e_l + e_w/2 - $tooltip.width()/2 + 'px',
 
-
'top' : e_t + e_h + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_T');
 
-
break;
 
-
case 'R' :
 
-
properties = {
 
-
'left' : e_l - $tooltip.width() + 'px',
 
-
'top' : e_t + e_h/2 - $tooltip.height()/2 + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_R');
 
-
break;
 
-
case 'B' :
 
-
properties = {
 
-
'left' : e_l + e_w/2 - $tooltip.width()/2 + 'px',
 
-
'top' : e_t - $tooltip.height() + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_B');
 
-
break;
 
-
case 'L' :
 
-
properties = {
 
-
'left' : e_l + e_w  + 'px',
 
-
'top' : e_t + e_h/2 - $tooltip.height()/2 + 'px'
 
-
};
 
-
$tooltip.find('span.tooltip_arrow').addClass('tooltip_arrow_L');
 
-
break;
 
-
}
 
-
 
-
 
-
/*
 
-
if the element is not in the viewport
 
-
we scroll to it before displaying the tooltip
 
-
*/
 
-
var w_t = $(window).scrollTop();
 
-
var w_b = $(window).scrollTop() + $(window).height();
 
-
//get the boundaries of the element + tooltip
 
-
var b_t = parseFloat(properties.top,10);
 
-
 
-
if(e_t < b_t)
 
-
b_t = e_t;
 
-
 
-
var b_b = parseFloat(properties.top,10) + $tooltip.height();
 
-
if((e_t + e_h) > b_b)
 
-
b_b = e_t + e_h;
 
-
 
-
 
-
if((b_t < w_t || b_t > w_b) || (b_b < w_t || b_b > w_b)){
 
-
$('html, body').stop()
 
-
.animate({scrollTop: b_t}, 500, 'easeInOutExpo', function(){
 
-
//need to reset the timeout because of the animation delay
 
-
if(autoplay){
 
-
clearTimeout(showtime);
 
-
showtime = setTimeout(nextStep,step_config.time);
 
-
}
 
-
//show the new tooltip
 
-
$tooltip.css(properties).show();
 
-
});
 
-
}
 
-
else
 
-
//show the new tooltip
 
-
$tooltip.css(properties).show();
 
-
}
 
-
 
-
function removeTooltip(){
 
-
$('#tour_tooltip').remove();
 
-
}
 
-
 
-
function showControls(){
 
-
/*
 
-
we can restart or stop the tour,
 
-
and also navigate through the steps
 
-
*/
 
-
var $tourcontrols  = '<div id="tourcontrols" class="tourcontrols">';
 
-
$tourcontrols += '<p>Data Page. Step by Step</p>';
 
-
$tourcontrols += '<span class="button" id="activatetour">Start the tour</span>';
 
-
if(!autoplay){
 
-
$tourcontrols += '<div class="nav"><span class="button" id="prevstep" style="display:none;">< Previous</span>';
 
-
$tourcontrols += '<span class="button" id="nextstep" style="display:none;">Next ></span></div>';
 
-
}
 
-
$tourcontrols += '<a id="restarttour" style="display:none;">Restart the tour</span>';
 
-
$tourcontrols += '<a id="endtour" style="display:none;">End the tour</a>';
 
-
$tourcontrols += '<span class="close" id="canceltour"></span>';
 
-
$tourcontrols += '</div>';
 
-
 
-
$('BODY').prepend($tourcontrols);
 
-
$('#tourcontrols').animate({'right':'30px'},500);
 
-
}
 
-
 
-
function hideControls(){
 
-
$('#tourcontrols').remove();
 
-
}
 
-
 
-
function showOverlay(){
 
-
var $overlay = '<div id="tour_overlay" class="overlay"></div>';
 
-
$('BODY').prepend($overlay);
 
-
}
 
-
 
-
function hideOverlay(){
 
-
$('#tour_overlay').remove();
 
-
}
 
-
 
-
});
 
-
        </script>
 
-
                        </div>
 
-
                        <div class="left">
 
-
                              </html>{{:Team:UPO-Sevilla/leftTemplateFoundational_Advances}}<html>
 
                         </div>
                         </div>
</html>
</html>
-
{{:Team:UPO-Sevilla/footTemplate}}
+
{{:Team:UPO-Sevilla/footTemplateHome}}

Revision as of 16:38, 20 September 2011