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Team:Sevilla/Software/Ubbit
From 2011.igem.org
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| - | <strong>Ubbit.org</strong>The ubbit repository is a web | + | <strong>Ubbit.org</strong>The ubbit repository is a web database developed to make easy the implementation of the Ubbit standard. The main functionalities of the database are: </p> |
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| + | <li>A modelling language based on P systems which allows modular and parsimonious multi-cellular model development including geometric information. | ||
| + | <li>A multi-compartmental stochastic simulator based on Gillespie’s Stochastic Simulation Algorithm for multi-cellular systems. | ||
| + | <li>Formal model analysis using the stochastic model checkers PRISM and MC2 for the study of temporal and spatial model properties. | ||
| + | <li>Structural and parameter model optimisation using evolutionary algorithms to automatically generate models whose dynamics match specified targets. | ||
| + | </ul> | ||
</p> | </p> | ||
Revision as of 08:57, 20 September 2011
- Home
- The team
- The project
- Software
- Modelling
- Safety
- Notebook
- Sponsors
- Acknowledgments
- ArcanumTV
- Gallery
Ubbit repository
Ubbit.orgThe ubbit repository is a web database developed to make easy the implementation of the Ubbit standard. The main functionalities of the database are:
- A modelling language based on P systems which allows modular and parsimonious multi-cellular model development including geometric information.
- A multi-compartmental stochastic simulator based on Gillespie’s Stochastic Simulation Algorithm for multi-cellular systems.
- Formal model analysis using the stochastic model checkers PRISM and MC2 for the study of temporal and spatial model properties.
- Structural and parameter model optimisation using evolutionary algorithms to automatically generate models whose dynamics match specified targets.
The future of Ubbit.com
Ubbit.org
<forum_onpage> Team2011 > Sevilla > Ubbit </forum_onpage>
