Team:Tokyo Metropolitan/Notebook/S12
From 2011.igem.org
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had been incubated at 37 deg C after treat restriction enzyme with preceding enzymes. | had been incubated at 37 deg C after treat restriction enzyme with preceding enzymes. | ||
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+ | = -Visualization- = | ||
+ | |||
+ | -Digestion | ||
+ | |||
+ | OriTr-GFP | ||
+ | |||
+ | EcoRⅠ 1 ul | ||
+ | |||
+ | SpeⅠ 1 ul | ||
+ | |||
+ | plasmid 4 ul | ||
+ | |||
+ | 10×H 1.75 ul | ||
+ | |||
+ | DW 9.75 ul | ||
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+ | Totall 17.5 ul | ||
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+ | |||
+ | -OriTr | ||
+ | |||
+ | EcoRⅠ 1 ul | ||
+ | |||
+ | XbaⅠ 1 ul | ||
+ | |||
+ | plasmid 4 ul | ||
+ | |||
+ | 10×H 1.75 ul | ||
+ | |||
+ | DW 9.75 ul | ||
+ | |||
+ | Totall 17.5 ul | ||
+ | |||
+ | |||
+ | -Electrophoresis | ||
+ | |||
+ | According to protocol | ||
+ | |||
+ | -Gel extraction | ||
+ | |||
+ | Used QIAGEN's kits | ||
+ | |||
+ | |||
+ | -Electrophoresis to check | ||
+ | |||
+ | Run 3 ul. | ||
+ | |||
+ | Checked bands. | ||
+ | |||
+ | |||
+ | -Ligation | ||
+ | |||
+ | OriTr 2 ul | ||
+ | |||
+ | OriTr-GFP 6 ul | ||
+ | |||
+ | T4 Ligase 1 ul | ||
+ | |||
+ | 10×Ligation buffur 2 ul | ||
+ | |||
+ | DW 9 ul | ||
+ | |||
+ | Totall 20 ul |
Revision as of 11:04, 5 October 2011
-Targeting-
-Electrophoresis Checked to treat restriction enzyme for J04450 and J23100-P0440. Cut only J23100-P0440.
-Plasmid extraction and DNA refining
Extracted plasmids and refined DNA for J23100-K317037, J23100-P0440, K283030 and J22005.
Results (concentration = ng/ul)
J2310-K317037 (Jack) was 60
J23100-P0440 (Jamper) was 120
K283030 (Kasuga) was 155
J22005 (Jin) was 183
-Treat restriction enzyme
Treated restriction enzyme with E and P for J04450. After, incubated at 37 deg C for 5 hours.
-Electrophoresis
Checked to treat restriction enzyme for J04450. Results was a failure.
-Treat restriction enzyme
Jack -> S and P
Jamper -> E and P
Kasuga -> X and P
Jin -> Nhe
had been incubated at 37 deg C after treat restriction enzyme with preceding enzymes.
-Visualization-
-Digestion
OriTr-GFP
EcoRⅠ 1 ul
SpeⅠ 1 ul
plasmid 4 ul
10×H 1.75 ul
DW 9.75 ul
Totall 17.5 ul
-OriTr
EcoRⅠ 1 ul
XbaⅠ 1 ul
plasmid 4 ul
10×H 1.75 ul
DW 9.75 ul
Totall 17.5 ul
-Electrophoresis
According to protocol
-Gel extraction
Used QIAGEN's kits
-Electrophoresis to check
Run 3 ul.
Checked bands.
-Ligation
OriTr 2 ul
OriTr-GFP 6 ul
T4 Ligase 1 ul
10×Ligation buffur 2 ul
DW 9 ul
Totall 20 ul