Team:DTU-Denmark/Data
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- | + | [[File:DTU1_Data_page-figure1.png|665px|thumb|center| '''1.''' Tetracycline induces chiX transcription. '''2.''' chiX base-pair and sequester the lacZ mRNA RBS, which inhibits translation of the mRNA. '''3.''' Arabinose induces chiXR transcription. '''4.''' chiXR base-pair to chiX , which promote degradation of the sRNA. '''5.''' LacZ repression is relieved.]] | |
+ | [[File:DTU1_Data_page-figure2.png|665px|thumb|center|In a strain that constutively expresses chiX but is lacking chiXR, induction with chitobiose only has the effect of inducing transcription from the promoter, and does not remove chiX downregulation.]] | ||
+ | [[File:DTU1_Data_page-figure3.png|665px|center|thumb|In a strain deficient in chiX induction with chitobiose has little effect since the chiP RBS is already unregulated.]] | ||
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+ | '''Data For Our Favorite New Parts:''' | ||
+ | # [http://partsregistry.org/Part:BBa_K564012 Main Page] '''P<sub>chiP</sub>(original):lacZ, BBa_K564012''' : Promoter of the chitoporin chiP gene fused with lacZ (from [http://partsregistry.org/Part:BBa_I732005 BBa_I732005]) encoding β-galactosidase. Is induced by chitobiose and is regulated by chiX | ||
+ | # [http://partsregistry.org/Part:BBa_K564013 Main Page] '''P<sub>chiP</sub>(mutated):lacZ, BBa_K564013''': Mutated promoter of the chitoporin chiP gene fused with lacZ (from [http://partsregistry.org/Part:BBa_I732005 BBa_I732005]) encoding β-galactosidase. Is induced by chitobiose, but not regulated by chiX | ||
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+ | '''Data For Pre-existing Parts:''' | ||
+ | # [http://partsregistry.org/Part:BBa_I732005:Experience Experience] '''lacZ (encoding beta-galactosidase, full-length), BBa_I732005''': This part controlled by the chiP promoter gave blue colonies when grown on chitobiose. | ||
+ | # [http://partsregistry.org/Part:BBa_I746908:Experience Experience] '''Inducible pBad/araC promoter, BBa_I746908''': We generated an synthetic promoter library (SPL) based on this part. This allows for the generation of a vast number of arabinose inducible promoters of various strengths. | ||
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+ | [[File:DTU1_Arabinose_promoter.png|665px|center|thumb|The arabinose promoter was improved both by rationally changing the -10 and the -35 part of the promoter, and randomly by generating an SPL from the wild-type promoter.]] | ||
{{:Team:DTU-Denmark/Templates/Standard_page_end}} | {{:Team:DTU-Denmark/Templates/Standard_page_end}} |
Latest revision as of 02:38, 22 September 2011
Data page
Data For Our Favorite New Parts:
- [http://partsregistry.org/Part:BBa_K564012 Main Page] PchiP(original):lacZ, BBa_K564012 : Promoter of the chitoporin chiP gene fused with lacZ (from [http://partsregistry.org/Part:BBa_I732005 BBa_I732005]) encoding β-galactosidase. Is induced by chitobiose and is regulated by chiX
- [http://partsregistry.org/Part:BBa_K564013 Main Page] PchiP(mutated):lacZ, BBa_K564013: Mutated promoter of the chitoporin chiP gene fused with lacZ (from [http://partsregistry.org/Part:BBa_I732005 BBa_I732005]) encoding β-galactosidase. Is induced by chitobiose, but not regulated by chiX
Data For Pre-existing Parts:
- [http://partsregistry.org/Part:BBa_I732005:Experience Experience] lacZ (encoding beta-galactosidase, full-length), BBa_I732005: This part controlled by the chiP promoter gave blue colonies when grown on chitobiose.
- [http://partsregistry.org/Part:BBa_I746908:Experience Experience] Inducible pBad/araC promoter, BBa_I746908: We generated an synthetic promoter library (SPL) based on this part. This allows for the generation of a vast number of arabinose inducible promoters of various strengths.