Team:EPF-Lausanne/Protocols/TetR

From 2011.igem.org

(Difference between revisions)
(Materials)
(PCR Cycle (30 cycles))
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*<b>1.</b> 98°C for 30s
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:<b>1.</b> 98°C for 30s
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*<b>2.</b> 98°C for 7.5 seconds
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:<b>2.</b> 98°C for 7.5 seconds
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*<b>3.</b> 58°C for 20 sec (this depends on the primers,  
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:<b>3.</b> 58°C for 20 sec (this depends on the primers,  
therefore look up the annealing temperature of the primers used
therefore look up the annealing temperature of the primers used
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*<b>4.</b> 72°C for 15 sec; you have to calculate the time required.
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:<b>4.</b> 72°C for 15 sec; you have to calculate the time required.
This polymerase has an effciency of 15-30s/kb.(calculate for the longest fragment)  
This polymerase has an effciency of 15-30s/kb.(calculate for the longest fragment)  
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*<b>5.</b> 72°C for 5 min
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:<b>5.</b> 72°C for 5 min
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*<b>6.</b> 4°C "forever"
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:<b>6.</b> 4°C "forever"
*Save the file in the MAIN folder→ OK→ SAVE→RUN→Select the block you use→ RUN→ Change sample volume to 50µl, LidT should be 105°C and the box just below ("hotlid") should ALWAYS be checked
*Save the file in the MAIN folder→ OK→ SAVE→RUN→Select the block you use→ RUN→ Change sample volume to 50µl, LidT should be 105°C and the box just below ("hotlid") should ALWAYS be checked

Revision as of 10:56, 10 July 2011