Team:HokkaidoU Japan/Protocols/Infection Assay
From 2011.igem.org
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==T3SS RK13 cell Injection Assay== | ==T3SS RK13 cell Injection Assay== | ||
===Seed RK13 cells=== | ===Seed RK13 cells=== | ||
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===Prepare ''E. coli'' culture=== | ===Prepare ''E. coli'' culture=== | ||
- | # Grow | + | # Grow ''E. coli'' in 4 mL of LB with appropriate antibiotics at 37C overnight |
===10 hrs before injection=== | ===10 hrs before injection=== | ||
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# Add 1 mL of ''E. coli'' RPMI(pH 5.0) culture(ΔOD = 0.06) | # Add 1 mL of ''E. coli'' RPMI(pH 5.0) culture(ΔOD = 0.06) | ||
# Incubate the plate at 37C, 5%CO<sub>2</sub> and observe the cells by Cofocal Laser Scannning Microscope(OLYMPUS FV-1000D) under blue and green exciter light at every 1.5 hrs after first exposure. | # Incubate the plate at 37C, 5%CO<sub>2</sub> and observe the cells by Cofocal Laser Scannning Microscope(OLYMPUS FV-1000D) under blue and green exciter light at every 1.5 hrs after first exposure. | ||
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{{Team:HokkaidoU_Japan/footer}} | {{Team:HokkaidoU_Japan/footer}} |
Latest revision as of 14:09, 23 October 2011
HokkaidoU Japan
iGEM 2011 Team of Hokkaido University
Contents |
T3SS RK13 cell Injection Assay
Seed RK13 cells
- Remove the culture medium and wash 3 times with PBS follwed by trypsinization
- Suspend RK13 cells with antibiotics free RPMI-10% FCS
- Seed 2x105/well RK13 cells on a 6 well plate or a glass bottom 3.5 cm dish 20 hrs before infection
Prepare E. coli culture
- Grow E. coli in 4 mL of LB with appropriate antibiotics at 37C overnight
10 hrs before injection
- Centrifuge 4 mL of E. coli culture at 3,500 rpm for 10 min in the round tube.
- Centrifuge the culture 3,500 rpm for 10 min
- Discard the sup and resuspend with 4 mL of MgM-MES(pH 5.0) with appropriate antibiotics and grow for 4 hrs at 37C
- 4 hrs later(1 hr before injection) centrifuge the culture 3,500 rpm for 10 min, and discard the sup
- Resuspend the pellet with 1 mL of antibiotics free RPMI-10% FCS+HCl(pH 5.0) and transfer the culture into micro tube
- Centrifuge the culture 5,000 rpm for 2 min and discard the sup
- Repeat step 6 and 7 three times
- Measure and adjust the concentration of E. coli RPMI(pH 5.0) culture(ΔOD = 0.06)
- And appropriate antibiotics into this E. coli culture
Injection
- Remove the RPMI on RK13
- Add 1 mL of E. coli RPMI(pH 5.0) culture(ΔOD = 0.06)
- Incubate the plate at 37C, 5%CO2 and observe the cells by Cofocal Laser Scannning Microscope(OLYMPUS FV-1000D) under blue and green exciter light at every 1.5 hrs after first exposure.