Team:Hong Kong-CUHK/Project/overview

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<li><a class="selected" href="/Team:Hong_Kong-CUHK/Project/background">Background</a></li>
<li><a class="list-2" href="/Team:Hong_Kong-CUHK/Project/Halorhodopsin">Halorhodopsin</a></li>
<li><a class="list-2" href="/Team:Hong_Kong-CUHK/Project/Halorhodopsin">Halorhodopsin</a></li>
<li><a class="list-2" href="/Team:Hong_Kong-CUHK/Project/Chloride Sensing Unit">Chloride Sensing Unit</a></li>
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<h3>Previous related projects</h3>
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<h3>Project Overview</h3>
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In 2010 iGEM competition, Queens-Canada team submited <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> from <em>H. salinarum</em> as biobricks and inserted this gene into <em>C. elegans</em>. However, it was not well characterized. This year, we are trying to clone halorhdopsin from <em>N. pharaonis,</em> which has already been successfully introduced and proved to perform complete light cycles in <em>E. coli, </em>to our biobrick system<sup>1</sup>. We aim to characterize the efficiency of this <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> to be a well-documented biobrick and a useful tool in <em>E. coli</em>.
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In previous iGEM projects, various light sensors have been developed, including red light sensor (UT Austin, 2004), green light sensor (Tokyo-Nokogen, 2009) and blue light sensor (University of Edinburgh, 2010). They are all light-induced fusion transcription factors that trigger gene expression under the control of specific promoters, facilitating simply on/off switch and light-coupled communication. However, our design makes <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> not only a dynamically tunable light sensor – by coupling with chloride sensitive promoters (e.g. P<sub>gad</sub>), but also an energy converter – by storing solar energy as osmolality potential and further converted it into electricity. Our project would provide a wilder scope of applications from signal transduction and gene regulation to energy generation.
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<a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a>, a light-driven ion pump originating from Halobacterium, employs light to transport chloride ions into cells uni-directionally against osmolality. Since chloride ion is a ubiquitous and essential element in most biological systems, <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> has the fascinating property to transform solar energy, the most abundant energy in the world, into intracellular chloride ion level. However, this specificity of <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> has not been well regulated and characterized in the previous competition. It is of our great interest to characterize its properties, and eventually utilize them in our project, seeking the possibilities to benefit synthetic biology and the human society.  
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<p>In our project, we integrated <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> into functional biobricks. Based on the characterized properties of <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a>, we have furthermore developed and implemented two innovative applications: light-mediated electricity generation and light-coupled computer-aided expression platform. The palatable results show us the power and the potential usage of this fascinating tool. We are glad to introduce our achievements in the project session.  
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References
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1.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Hohenfeld, I. Purification of histidine tagged bacteriorhodopsin, pharaonis <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> and pharaonis sensory rhodopsin II functionally expressed in Escherichia coli. <em>FEBS Letters</em> <strong>442</strong>,198-202(1999).  
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Besides the proof-of-concept designs in our projects, any design with the linkage of light and chloride ions can be accomplished by this tool. Thus, there are much more potential applications development. We believe that <a href="http://en.wikipedia.org/wiki/Halorhodopsin">Halorhodopsin</a> would be a promising and useful biobrick in the future.
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Revision as of 22:04, 5 October 2011

Previous related projects

 

In 2010 iGEM competition, Queens-Canada team submited Halorhodopsin from H. salinarum as biobricks and inserted this gene into C. elegans. However, it was not well characterized. This year, we are trying to clone halorhdopsin from N. pharaonis, which has already been successfully introduced and proved to perform complete light cycles in E. coli, to our biobrick system1. We aim to characterize the efficiency of this Halorhodopsin to be a well-documented biobrick and a useful tool in E. coli.

 

In previous iGEM projects, various light sensors have been developed, including red light sensor (UT Austin, 2004), green light sensor (Tokyo-Nokogen, 2009) and blue light sensor (University of Edinburgh, 2010). They are all light-induced fusion transcription factors that trigger gene expression under the control of specific promoters, facilitating simply on/off switch and light-coupled communication. However, our design makes Halorhodopsin not only a dynamically tunable light sensor – by coupling with chloride sensitive promoters (e.g. Pgad), but also an energy converter – by storing solar energy as osmolality potential and further converted it into electricity. Our project would provide a wilder scope of applications from signal transduction and gene regulation to energy generation.

 

 

References

1.        Hohenfeld, I. Purification of histidine tagged bacteriorhodopsin, pharaonis Halorhodopsin and pharaonis sensory rhodopsin II functionally expressed in Escherichia coli. FEBS Letters 442,198-202(1999).

 

 

 



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