Team:DTU-Denmark/Restriction protocol
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Enzyme selection for BioBricks digest | Enzyme selection for BioBricks digest | ||
- | A BioBricks part: | + | A BioBricks part: |
- | -----E--X---Part---S--P----- | + | |
+ | -----E--X---Part---S--P----- | ||
Vector with upstream part - S,P | Vector with upstream part - S,P |
Revision as of 15:19, 18 September 2011
Restriction/Digestion
Restriction/Digestion
Materials:
- 25 µL DNA (but varies depending on your DNA conc.)
- 10 µL FD-buffer
- 1 µL restriction enzyme (1 & 2) (you can also use 2.5µL of each RE, which showed good results in previous digestions (AJ+PF))
- Using 1µL RE: 63ul ddH2O. Using 2.5µL RE: 60 µL ddH2O (Total volume of 100 µL)
- Turn the thermo block on 30 min before use. Mix everything – add the enzymes last. Leave for 2 hour at 37 C in thermo block/incubator.
- To deactivate the enzyme leave it at 65 C in a thermo block for 10 min.
- Keep on ice until its cooled down.
IMPORTANT: If you only use one RE on your plasmid SAP treatment is required:
- Mix 50µL of the restricted DNA with 2.5µL SAP and 5µL SAP-buffer
- Put it in the incubator 37°C for 60 min
- 15 minutes on heat block 65°C to deactivate enzyme
- Ice
Enzyme selection for BioBricks digest A BioBricks part:
-----E--X---Part---S--P-----
Vector with upstream part - S,P Downstream Insert - X,P Upstream Insert - E,S Vector with downstream part- E,X
E= EcoRI X= XbaI S= SpeI P= PstI
Enzymes should be kept in the icebox from the freezer at all times.