Team:Wageningen UR/Project/ModelingProj1
From 2011.igem.org
(→Modeling synchronized oscillations) |
(→Modeling synchronized oscillations) |
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=== Short repetition of the Hasty construct used as base for our system === | === Short repetition of the Hasty construct used as base for our system === | ||
- | For a better understanding of the equations | + | For a better understanding of the equations, figure 1 shows a short repetition of the circuit published by Danino et al. in the paper [http://www.nature.com/nature/journal/v463/n7279/abs/nature08753.html “A synchronized quorum of genetic clocks”], which we used as a base for our design, in our team commonly referred to as the "Hasty construct". |
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=== Mathematical model of the construct === | === Mathematical model of the construct === | ||
- | Since our bio bricked oscillatory system is based on the design | + | Since our bio bricked oscillatory system is based on the design seen above, our first model of the system is a reproduction of the mathematical model in the supplementary information accompanying the publication mentioned. In their simulations, Danino et al. used the following set of delay differential equations, which we used as base for our simulation tool written in matlab. }} |
[[File:Equations_hasty_WUR.png|350px|center]] | [[File:Equations_hasty_WUR.png|350px|center]] |
Revision as of 21:57, 11 September 2011