Team:USTC-Software/download

From 2011.igem.org

(Difference between revisions)
 
Line 1: Line 1:
__NOTOC__
__NOTOC__
-
{{:Team:USTC-Software/temp}}
+
{{:Team:USTC-Software/header}}
-
 
+
<html xmlns="http://www.w3.org/1999/xhtml">
<html xmlns="http://www.w3.org/1999/xhtml">
-
<head>
 
-
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
 
-
<title>Team:USTC-Software - 2011.igem.org/download</title>
 
-
<meta name="description" content="download"/>
 
-
<meta name="keywords" content="USTC-Software,iGEM,synthetic biology"/>
 
-
<meta name="author" content="Ao Xu">
 
-
<meta name="copyright" content="Copyright (c) 2011 iGEM USTC Software" />
 
-
 
-
<style type="text/css">
 
-
 
-
body {
 
-
margin: 0;
 
-
padding: 0;
 
-
line-height: 1.5em;
 
-
font-family: Georgia, "Times New Roman", Times, serif;
 
-
font-size: 12px;
 
-
color: #555a4a;
 
-
    background: #a0c73f;
 
-
}
 
-
 
-
a:link, a:visited { color: #0683ab; text-decoration: none; font-weight: normal; }
 
-
a:active, a:hover { color: #0683ab; text-decoration: underline; }
 
-
 
-
 
-
img { margin: 0px; padding: 0px; border: none; }
 
-
 
-
 
-
#header_wrapper {
 
-
width: 100%;
 
-
height: 265px;
 
-
background: url(https://static.igem.org/mediawiki/2011/0/04/USTC_Software_header.jpg) no-repeat top center;
 
-
}
 
-
 
-
#header {
 
-
position: relative;
 
-
width: 980px;
 
-
height: 265px;
 
-
padding: 0 10px;
 
-
margin: 0 auto;
 
-
background: url(https://static.igem.org/mediawiki/2011/0/04/USTC_Software_header.jpg) no-repeat top center;
 
-
}
 
-
 
-
/* site title */
 
-
 
-
#header  #site_title {
 
-
float: left;
 
-
width: 180px;
 
-
padding: 33px 0;
 
-
}
 
-
 
-
#site_title h1 {
 
-
margin: 0;
 
-
padding: 3px;
 
-
font-family:"Times New Roman", Times, serif;
 
-
color:#000;
 
-
font-size:24px;
 
-
}
 
-
 
-
 
-
#site_title h1 a {
 
-
margin: 0px;
 
-
padding: 0px;
 
-
font-size: 30px;
 
-
color: #ffffff;
 
-
font-weight: bold;
 
-
text-decoration: none;
 
-
}
 
-
 
-
#site_title h1 a:hover {
 
-
font-weight: bold;
 
-
text-decoration: none;
 
-
}
 
-
 
-
#site_title h1 a span {
 
-
display: block;
 
-
margin-left: 2px;
 
-
font-size: 14px;
 
-
color: #416902;
 
-
font-weight: bold;
 
-
letter-spacing: 2px;
 
-
}
 
-
 
-
/* end of site title */
 
-
 
-
/* ---------- Navigation ---------- */
 
-
 
-
ul  {
 
-
      list-style-image: none;
 
-
}
 
-
 
-
#nav {
 
-
float: right;
 
-
font-family: Arial, Helvetica, sans-serif;
 
-
font-weight: bold;
 
-
font-size: 12px;
 
-
padding-top: 70px;
 
-
height: 43px;
 
-
}
 
-
 
-
#nav .last {
 
-
padding-right: 2px;
 
-
background-image:url(https://static.igem.org/mediawiki/2011/5/59/USTC_Software_nav_button_sep.jpg);
 
-
background-repeat:no-repeat;
 
-
background-position:right;
 
-
}
 
-
 
-
#nav, #nav ul{
 
-
margin:0;
 
-
padding:0;
 
-
list-style-type:none;
 
-
list-style-position:outside;
 
-
position:relative;
 
-
line-height:1.5em;
 
-
}
 
-
 
-
#nav .on {
 
-
color:#fff !important;
 
-
background-image: url(https://static.igem.org/mediawiki/2011/0/00/USTC_Software_nav_button_bg.jpg) !important;
 
-
background-position: bottom left !important;
 
-
}
 
-
 
-
#nav a:link, #nav a:active, #nav a:visited{
 
-
    display:block;
 
-
    padding: 14px 35px;
 
-
    color:#a5a5a5;
 
-
    text-decoration:none;
 
-
text-transform: uppercase;
 
-
background-image: url(https://static.igem.org/mediawiki/2011/0/00/USTC_Software_nav_button_bg.jpg);
 
-
background-position: top left;
 
-
}
 
-
 
-
#nav a:hover {
 
-
    color:#fff;
 
-
background-image: url(https://static.igem.org/mediawiki/2011/0/00/USTC_Software_nav_button_bg.jpg);
 
-
background-position: bottom left;
 
-
}
 
-
 
-
#nav li{
 
-
    float:left;
 
-
    position:relative;
 
-
 
-
}
 
-
 
-
#nav ul {
 
-
    position:absolute;
 
-
    width:13em;
 
-
    top:3.8em;
 
-
    display:none;
 
-
z-index: 1;
 
-
}
 
-
 
-
#nav li ul a {
 
-
    width:9em;
 
-
    float:left;
 
-
background-color: #2e2e2e;
 
-
background-image: none !important;
 
-
}
 
-
 
-
#nav li ul a:hover {
 
-
background-color: #292929;
 
-
}
 
-
 
-
#nav ul ul{
 
-
top:auto;
 
-
}
 
-
 
-
#nav li ul ul {
 
-
    left:12em;
 
-
    margin:0px 0 0 10px;
 
-
    }
 
-
 
-
#nav li:hover ul ul, #nav li:hover ul ul ul, #nav li:hover ul ul ul ul{
 
-
    display:none;
 
-
    }
 
-
 
-
#nav li:hover ul, #nav li li:hover ul, #nav li li li:hover ul, #nav li li li li:hover ul{
 
-
    display:block;
 
-
    }
 
-
 
-
/*end of nav*/
 
-
 
-
/* content_wrapper */
 
-
 
-
#content {
 
-
        background-color:#a0c73f;
 
-
        width:auto;
 
-
}
 
-
 
-
#content_wrapper {
 
-
width: 920px;
 
-
margin: 0 auto;
 
-
padding: 30px 40px;
 
-
background: url(https://static.igem.org/mediawiki/2011/b/bc/USTC_Software_content.jpg) repeat-y;
 
-
}
 
-
 
-
#content_wrapper h1 {
 
-
color: #3a5909;
 
-
font-size: 24px;
 
-
padding: 0 0 60px 20px;
 
-
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
 
-
}
 
-
 
-
#content_wrapper h2 {
 
-
color: #000;
 
-
font-size:18px;
 
-
}
 
-
 
-
#content_wrapper p {
 
-
font-family: Verdana, Arial;
 
-
font-size: 14px;
 
-
}
 
-
 
-
#intro p {
 
-
font-family: Verdana, Arial;
 
-
font-size: 12px;
 
-
}
 
-
 
-
#content_wrapper_bottom {
 
-
width: 1000px;
 
-
height: 15px;
 
-
margin: 0 auto;
 
-
background: url(https://static.igem.org/mediawiki/2011/a/a5/USTC_Software_content_bottom.jpg) no-repeat;
 
-
    background-color: #a0c73f;
 
-
}
 
-
 
-
/* end of content_wrapper */
 
-
 
-
/* footer */
 
-
 
-
#mfooter {
 
-
width: 980px;
 
-
margin: 0 auto;
 
-
padding: 30px 10px;
 
-
text-align: center;
 
-
color: #333333;
 
-
    background-color: #a0c73f;
 
-
}
 
-
 
-
#mfooter a {
 
-
color:#000;
 
-
}
 
-
 
-
#mfooter .mfooter_menu {
 
-
margin: 0 0 10px 0;
 
-
padding: 0px;
 
-
list-style: none;
 
-
}
 
-
 
-
.mfooter_menu li {
 
-
margin: 0px;
 
-
padding: 0 20px;
 
-
display: inline;
 
-
border-right: 1px solid #000000;
 
-
}
 
-
 
-
.mfooter_menu .last_menu {
 
-
border: none;
 
-
}
 
-
 
-
#footer-box { background-color: transparent; border:none;} /*This is important!*/
 
-
 
-
#totop_box {
 
-
position:fixed;
 
-
width: 77px;
 
-
height: 75px;
 
-
bottom: 21px;
 
-
right: 15px;
 
-
}
 
-
 
-
#totop_box form {
 
-
width: 280px;
 
-
height: 27px;
 
-
margin: 0;
 
-
padding: 25px 0 0 0;
 
-
}
 
-
 
-
#to_org_box {
 
-
position:fixed;
 
-
width: 77px;
 
-
height: 75px;
 
-
bottom: 21px;
 
-
right: 105px;
 
-
}
 
-
 
-
#to_org_box form {
 
-
width: 280px;
 
-
height: 27px;
 
-
margin: 0;
 
-
padding: 25px 0 0 0;
 
-
}
 
-
/* end of footer*/
 
-
 
-
</style>
 
-
 
-
 
-
</head>
 
-
 
<body>
<body>
-
<div id="header_wrapper">
 
-
 
-
    <div id="header">
 
-
   
 
-
  <div id="site_title">
 
-
            <h1><img src="https://static.igem.org/mediawiki/2011/b/b8/USTC_Software_iGEM_logo.jpg" alt="iGEM" width="173" height="150" /> </br> </br> USTC-Software </h1>
 
-
        </div>
 
-
       
 
-
<!-- navigation -->
 
-
<ul id="nav">
 
-
<li><a href="https://2011.igem.org/Team:USTC-Software">Home</a></li>
 
-
 
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/project">Project</a>
 
-
<ul>
 
-
<li><a href="https://2011.igem.org/Team:USTC-Software/documents">Documents Parser & Models </a></li>
 
-
<li><a href="#">Views</a>
 
-
                                  <ul>
 
-
                                      <li><a href="https://2011.igem.org/Team:USTC-Software/aview">Assembly View</a></li>
 
-
                                      <li><a href="https://2011.igem.org/Team:USTC-Software/bview">Behavior View</a></li>
 
-
                                      <li><a href="https://2011.igem.org/Team:USTC-Software/nview">Network View</a></li>                     
 
-
                                  </ul>
 
-
                                </li>
 
-
 
-
                                <li><a href="#">Technology & Algorithm</a>
 
-
                                  <ul>
 
-
                                    <li><a href="https://2011.igem.org/Team:USTC-Software/parameter">parameter analysis</a></li>
 
-
                                    <li><a href="https://2011.igem.org/Team:USTC-Software/model">MoDeL</a></li>
 
-
                                  </ul>
 
-
                                </li>
 
-
                                   
 
-
                                <li><a href="https://2011.igem.org/Team:USTC-Software/tutorial">Tutorial & Demo</a></li>
 
-
</ul>
 
-
</li>
 
-
 
-
 
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/notebook">Notebook</a></li>
 
-
 
-
<li><a href="https://2011.igem.org/Team:USTC-Software/team">Team</a>
 
-
                          <ul>
 
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/members">members</a></li>
 
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/collaboration">collaboration</a></li>
 
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/attribution">attribution & contributions</a></li>
 
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/acknowledgements">acknowledgements</a></li>
 
-
                          </ul>
 
-
                </li>
 
-
 
 
-
  <li><a href="https://2011.igem.org/Team:USTC-Software/human practice">Human practice</a>             
 
-
  <ul>
 
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/safety">safety</a></li>
 
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/meetup">meetup</a></li>
 
-
  </ul>
 
-
</li> 
 
-
 
-
<li><a class="on" href="https://2011.igem.org/Team:USTC-Software/download">Download</a></li>
 
-
           
 
-
</ul>
 
-
<!-- // end of navigation -->
 
-
           
 
-
      <div class="cleaner"></div>
 
-
    </div> <!-- end of header -->
 
-
 
-
</div>
 
-
<!-- end of header_wrapper -->
 
-
 
<div id="content_wrapper">
<div id="content_wrapper">
-
 
-
 
<div id="intro">
<div id="intro">
<p> Contents:
<p> Contents:

Latest revision as of 06:21, 23 October 2011


Team:USTC-Software - 2011.igem.org

Download Lachesis & MoDeL

Lachesis sourcecode is available here.

MoDeL is available here .

You can use Git to download the current development version of Lachesis & MoDel, pre-compiled binary version should become available in a few days.

License

Lachesis and MoDeL are provided under the GNU General Public License, version 2 and all later versions.

Supported Platforms

Lachesis is developed with C++ and Qt and can be compiled & run on:
Windows Xp/Vista/7
Debian GNU/Linux
It should also work many on other platform that support Qt and mysql, but we do not guarantee.

MoDeL is written in Perl and should work on any platform that support perl & mysql.

Build & Install

MoDeL
Download & unpack MoDeL and follow the instructions in INSTALL to install MoDeL. You may also need to install mysql in the process.

Lachesis
NOTE: We are assuming that you have Qt-sdk on your computer. If not, please refer this page and install it first.

Download & unpack Lachesis's source code then build & run it with Qt. If you are working on Linux systems, use the following command:
qmake Lachesis.pro
make
cd bin
./LachesisD