Team:TU Munich/project/data

From 2011.igem.org

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<h2>Data For Our Favorite New Parts</h2>
<h2>Data For Our Favorite New Parts</h2>
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<li> <b><a target="_blank" href="http://partsregistry.org/Part:BBa_K568001">BBa_K568001</a>  - optogenetical AND-Gate red/blue light:</b></li>
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<li> <b><a target="_blank" href="http://partsregistry.org/Part:BBa_K568001">BBa_K568001</a>  - optogenetical AND-Gate red/blue light:</b></li> This part is the centerpiece of our 3D-printer. It is supposed to cause expression of a functional T7 polymerase only when both the red light and the blue light input are positive. Further characterization will be needed.
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<li> <b><a target="_blank" href="http://partsregistry.org/Part:BBa_K568002">BBa_K568002</a>  - blue light promoter with lacZ reporter part:</b></li>
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<li> <b><a target="_blank" href="http://partsregistry.org/Part:BBa_K568002">BBa_K568002</a>  - blue light promoter with lacZ reporter part:</b></li> The blue light promoter followed by lacZ is a simple optogenetic device that expresses beta-galactosidase if the blue light input is positive. We used this part to find out the characteristics of the response to blue light in ''E. coli''. The blue light promoter is part of the YcgE/F system which is a blue light sensor that is naturally found in ''E. coli''. Thus, only the promoter itself is needed in this part.
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<li> <b><a target="_blank" href="http://partsregistry.org/Part:BBa_K568003">BBa_K568003</a>  - T7 promoter with lacZ reporter part:</b></li>
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<li> <b><a target="_blank" href="http://partsregistry.org/Part:BBa_K568003">BBa_K568003</a>  - T7 promoter with lacZ reporter part:</b></li> Our original reporter construct. The presence of a functional T7 polymerase causes expression of beta-galactosidase. Thus, it is possible to detect the output of our optogenetical AND-Gate.
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Revision as of 18:29, 21 September 2011

Data For Our Favorite New Parts

  • BBa_K568001 - optogenetical AND-Gate red/blue light:
  • This part is the centerpiece of our 3D-printer. It is supposed to cause expression of a functional T7 polymerase only when both the red light and the blue light input are positive. Further characterization will be needed.
  • BBa_K568002 - blue light promoter with lacZ reporter part:
  • The blue light promoter followed by lacZ is a simple optogenetic device that expresses beta-galactosidase if the blue light input is positive. We used this part to find out the characteristics of the response to blue light in ''E. coli''. The blue light promoter is part of the YcgE/F system which is a blue light sensor that is naturally found in ''E. coli''. Thus, only the promoter itself is needed in this part.
  • BBa_K568003 - T7 promoter with lacZ reporter part:
  • Our original reporter construct. The presence of a functional T7 polymerase causes expression of beta-galactosidase. Thus, it is possible to detect the output of our optogenetical AND-Gate.


    All submitted parts

  • BBa_K568000 - red light sensor:
  • BBa_K568001 - optogenetical AND-Gate red/blue light:
  • BBa_K568002 - blue light promoter with lacZ reporter part:
  • BBa_K568003 - T7 promoter with lacZ reporter part:
  • BBa_K568004 - optogenetical AND-Gate withouth first promoter - choose your first input:
  • BBa_K568005 - Intermediate optogenetical AND-Gate withouth T7ptag:
  • BBa_K568006 - Intermediate synthetic part:


  • Data For Pre-existing Parts

  • Experience - hopcyA, BBa_K322127 (Edinburgh, 2010):

  • Experience - T7 promoter driving 6-his tagged P7 GFP, BBa_I746907 (Cambridge, 2007):

    We used this as additional reporter plasmid and did an IPTG induced GFP assay to verify the part. It worked perfectly for us.