Team:Johns Hopkins/Notebook/VitProtocol

From 2011.igem.org

(Difference between revisions)
(Carotenoid Assay)
(L-Ascorbic Acid Assay)
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====L-Ascorbic Acid Assay====
====L-Ascorbic Acid Assay====
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  - Inoculate cells at an initial optical density of 0.05 medium and grow for about 18 hours.
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* Inoculate cells at an initial optical density of 0.05 medium and grow for about 18 hours.
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  - Spin down in centrifuge at 4000 rpm for 5 min at 4°C.
+
* Spin down in centrifuge at 4000 rpm for 5 min at 4°C.
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  - Re-suspend in ice cold distilled water then spin down in centrifuge at 4000 rpm for 5 min at 4°C.
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* Re-suspend in ice cold distilled water then spin down in centrifuge at 4000 rpm for 5 min at 4°C.
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  - Resuspended in about three times volume of ice-cold 10% (w/v) trichloroacetic acid, vortexed vigorously, and kept in ice for 20 minutes.
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* Resuspended in about three times volume of ice-cold 10% (w/v) trichloroacetic acid, vortexed vigorously, and kept in ice for 20 minutes.
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  - Centrifuge and collect supernatant.
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* Centrifuge and collect supernatant.
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  - Determine Ascorbic acid spectrophotometrically following a method adapted from that of Sullivan et Clarke: 35 μl of sample mixed in a cuvette with 40 μl of H3PO4 (85%), 675 μl of α,α′-bipyridyl (0.5%), and 135 μl of FeCl3 (1%), after 10 min at room temperature, the absorbance at 525 nm was measured.
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* Determine Ascorbic acid spectrophotometrically following a method adapted from that of Sullivan et Clarke: 35 μl of sample mixed in a cuvette with 40 μl of H3PO4 (85%), 675 μl of α,α′-bipyridyl (0.5%), and 135 μl of FeCl3 (1%), after 10 min at room temperature, the absorbance at 525 nm was measured.
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Revision as of 02:31, 25 September 2011

VitaYeast - Johns Hopkins University, iGEM 2011

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Other Protocols:
Vitamin Assays

Contents

Vitamin C Concentration Assay

(By Anne Marie Helmenstine, Ph.D)

  1. Add 25.00 ml of vitamin C standard solution to a 125 ml Erlenmeyer flask.
  2. Add 10 drops of 1% starch solution.
  3. Rinse your buret with a small volume of the iodine solution and then fill it. Record the initial volume.
  4. Titrate the solution until the endpoint is reached. This will be when you see the first sign of blue color that persists after 20 seconds of swirling the solution.
  5. Record the final volume of iodine solution. The volume that was required is the starting volume minus the final volume.
  6. Repeat the titration at least twice more. The results should agree within 0.1 ml.
  7. You titrate samples exactly the same as you did your standard. Record the initial and final volume of iodine solution required to produce the color change at the endpoint.
Dough Media Recipes

Optimized recipe per plate:

  • 20ml H2O
  • 0.24g NaCl
  • 0.15g bactoagar
  • 0.75g flour
Vitamin C Assay Solutions
Starch Indicator Solution
  1. Add 0.50 g soluble starch to 50 ml near-boiling distilled water.
  2. Mix well and allow to cool before use. (doesn't have to be 1%; 0.5% is fine)
Iodine Solution
  1. Dissolve 5.00 g potassium iodide (KI) and 0.268 g potassium iodate (KIO3) in 200 ml of distilled water.
  2. Add 30 ml of 3 M sulfuric acid.
  3. Pour this solution into a 500 ml graduted cylinder and dilute it to a final volume of 500 ml with distilled water.
  4. Mix the solution.
  5. Transfer the solution to a 600 ml beaker. Label the beaker as your iodine solution.
Vitamin C Standard Solution
  1. Dissolve 0.250 g vitamin C (ascorbic acid) in 100 ml distilled water.
  2. Dilute to 250 ml with distilled water in a volumetric flask. Label the flask as your vitamin C standard solution.
Spectroscopy

Carotenoid Assay

  • Suspend cells in 1 mL of sterile water.
  • Add 0.5 to 0.75 mm glass beads and vortex for 3 minutes.
  • Add 2.5 mL of 0.2% (wt/vol) pyrogallol dissolved in methanol and vortex for 3 minutes.
  • Add 1.25 mL of 60% (wt/vol) KOH and vortex for 10 seconds.
  • Incubate for 1 h at 75ºC, vortexing every 15 minutes.
  • Add appropriate amount of hexane.
  • Centrifuge tubes for 5 minutes at 2,800 rpm.
  • Pipette 1 mL of hexane into a cuvette.
  • Measure absorbance at 449nm.
  • Total carotenoids (in µg/g[dw]) = (A449 x mL hexane) / (0.2702 x g [dw])

(Verwaal, R., Wang, J. Meijnen, J., Visser, H., Sandmann, G., van den Berg, J., van Ooyen, A. (2007). High-Level Production of Beta-Carotene in Saccharomyces cerevisiae by Successive Transformation with Carotenogenic Genes from Xanthophyllomyces dendrorhous. Applied Environmental Microbiology 2007.)

L-Ascorbic Acid Assay

  • Inoculate cells at an initial optical density of 0.05 medium and grow for about 18 hours.
  • Spin down in centrifuge at 4000 rpm for 5 min at 4°C.
  • Re-suspend in ice cold distilled water then spin down in centrifuge at 4000 rpm for 5 min at 4°C.
  • Resuspended in about three times volume of ice-cold 10% (w/v) trichloroacetic acid, vortexed vigorously, and kept in ice for 20 minutes.
  • Centrifuge and collect supernatant.
  • Determine Ascorbic acid spectrophotometrically following a method adapted from that of Sullivan et Clarke: 35 μl of sample mixed in a cuvette with 40 μl of H3PO4 (85%), 675 μl of α,α′-bipyridyl (0.5%), and 135 μl of FeCl3 (1%), after 10 min at room temperature, the absorbance at 525 nm was measured.