Team:HokkaidoU Japan/Protocols

From 2011.igem.org

Revision as of 01:59, 5 October 2011 by Sprkata (Talk | contribs)

Contents

General Protocols Infection Assay Primers

Primers

Note

Primer Name Whole Sequence
F/RAnnealing SequenceTmAdding Sequence


General Primers

EX_F gcagaattcgcggccgcttctagag
ForwardBiobrick Prefix74.5 CNone
PS_R agcctgcagcggccgctactagta
ReverseBiobrick Suffix74.6 CNone
suffix_F tactagtagcggccgctgcaggct
ForwardBiobrick Suffix74.6 CNone
prefix_R ctctagaagcggccgcgaattctgc
ReverseBiobrick Prefix74.5 CNone
100up_EX_F aacctataaaaataccgcatacac
Forward100bp upstream from Biobrick prefix62.7 CNone
200dn_PS_R tcccctgattctgtggataaccgt
Reverse200bp downstream from Biobrick suffix66.6 CNone


Primers Used for Backbone Construction

EX_RBS_SlrP_F GCAGAATTCGCGGCCGCTTCTAGAaaagaggagaaaatatgtttaatattactaatatacaatctacggc
ForwardRBS sequence, 5' terminal of SlrP coding sequence69.7 CBiobrick Prefix
PS_SlrP_R AGCCTGCAGCGGCCGCTACTAGTggtaagtcctaatattttcagacgaag
Reverse3'terminal of SlrP coding sequence64.5 CBiofusion Suffix
Bsa1_dt_F GGCGACTAGAGAGACCccaggcatcaaataaaacgaaag
Forward5'terminal of double terminator sequence63.6 CBsaI recognition site and its cleavage site
Bsa1_SlrP_R GGCCTGGCCTGAGACCCCggtaagtcctaatattttcagacga
Reverse3'terminal of SlrP coding Sequence63.0 CBsaI recognition site and its cleavage site
Bsa1_GSK_SlrP_R GGCCTGGCCTGAGACCCCACTTTCAGCGAAACTTGTAGTGCGAGGGCGACCACTCATggtaagtcctaatattttcagacga
Reverse3'terminal of SlrP coding Sequence63.6 CGSK Tag, BsaI recognition site and its cleavage site


Sequencing Primer

SlrP_373_to_394_F gaaagtcagtcacctatacccg
ForwardSlrP coding sequence, from 373bp to 394 bp63.4 CNone


Retrieved from "http://2011.igem.org/Team:HokkaidoU_Japan/Protocols"