Team:Dundee/Software

From 2011.igem.org

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             <h2>Gene Synthesis</h2>
             <h2>Gene Synthesis</h2>
             <p>The Gene Synthesis is a Java application that enables codon usage pattern matching. The application analyses the patterns of codon usage in the source organism and models a synthetic gene based on the codon usage table of the target organism. Gene Synthesis utilises codon usage data for over 35000 organisms: Nakamura, Y., Gojobori, T. and Ikemura, T. (2000) Nucl. Acids Res. 28, 292. </p><p>Download the application for free.</p>
             <p>The Gene Synthesis is a Java application that enables codon usage pattern matching. The application analyses the patterns of codon usage in the source organism and models a synthetic gene based on the codon usage table of the target organism. Gene Synthesis utilises codon usage data for over 35000 organisms: Nakamura, Y., Gojobori, T. and Ikemura, T. (2000) Nucl. Acids Res. 28, 292. </p><p>Download the application for free.</p>
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Revision as of 14:54, 15 August 2011

The Lazy Scientist

The Lazy Scientist is a translation tool aimed to assist synthetic biologists. The app has a number of functions including DNA to amino acid translation, back translation, reverse, complement and reverse complement. The app also contains a genetic codon lookup table allowing all corresponding codons for an amino acid to be looked up. The app is available for free in both the iPhone App Store and the Android Market.

The Lazy Scientist iPhone Main Screen The Lazy Scientist DNA to Amino Acid Screen The Lazy Scientist Android Version Main Screen The Lazy Scientist Translation Screen for the Android Version

The Gene Cutter

The Gene Cutter is a gene cutting tool aimed to assist synthetic biologists. The app has as two functions to help restriction map nucleotide sequences. The app is able to search a sequence for a specific enzyme and can also return a list of enzymes not present in the sequence.

The main screen for the gene cutter on the iPhone The lookup screen on the gene cutter on the iPhone

Gene Synthesis

The Gene Synthesis is a Java application that enables codon usage pattern matching. The application analyses the patterns of codon usage in the source organism and models a synthetic gene based on the codon usage table of the target organism. Gene Synthesis utilises codon usage data for over 35000 organisms: Nakamura, Y., Gojobori, T. and Ikemura, T. (2000) Nucl. Acids Res. 28, 292.

Download the application for free.

Screen Shot of Application
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