Team:Amsterdam/6 July 2011

From 2011.igem.org

(Difference between revisions)
(Ideas for modeling)
(Steady state model of promoters)
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***Transcription  
***Transcription  
****Measuring with qPCR  
****Measuring with qPCR  
-
**Translation
+
***Translation
-
***Fluorescence
+
****Fluorescence
**Growth rate
**Growth rate
*Information needed for all promoters
*Information needed for all promoters
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** The inducible promoters are also concentration dependent
** The inducible promoters are also concentration dependent
*** Need to look into literature for already available information
*** Need to look into literature for already available information
 +
==The cold chock promoter==
==The cold chock promoter==
*How does this promoter work?
*How does this promoter work?

Revision as of 12:08, 6 July 2011

Contents

Ideas for modelling

Brainstorm session with Douwe Molenaar and Isoude Kuijper

Steady state model of promoters

  • Information needed for model
    • Stability
      • Transcription
        • Measuring with qPCR
      • Translation
        • Fluorescence
    • Growth rate
  • Information needed for all promoters
    • Inducible promoter
      • IPTG promoter is also dependable on a lactose receptor/transporter
    • Cold shock promoter
  • Temperature dependent
    • The inducible promoters are also concentration dependent
      • Need to look into literature for already available information

The cold chock promoter

  • How does this promoter work?

Cryobrick

  • What concentration is needed?
    • How many targets do the chaperone proteins have?

Enzyme activity

  • Enzyme activity is also temperature dependent