Team:METU-BIN Ankara/Project

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METU-BIN iGEM Software TeamProject: Mining for BioBricks

Project

M4B: Mining for BioBricks

Main goal of our 2011 project is to provide a web based tool that helps synthetic biologists at the pre-experimental step to design their genetic constructs according to their input and output parameters.

  • A network of all bioparts in 2011 distribution will be generated, which describes the functional relations between the subatomic bioparts.
  • A search algorithm will be developed to reveal all possible device combinations for the user defined input and output within bioparts of 2011 distribution.
  • Visualization tools will be applied for graphical representation of the results.
  • A web-based user interface will be provided for the developed software.

Introduction

Design

Algorithm

Database Standardization

Scoring

Results

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