Bacterial Full Etch-a-Sketch
Lou, Chunbo, Xili Liu, Ming Ni, Yiqi Huang, Qiushi Huang, Longwen Huang, Lingli Jiang, Dan Lu, Mingcong Wang, Chang Liu, Daizhuo Chen, Chongyi Chen, Xiaoyue Chen, Le Yang, Haisu Ma, Jianguo Chen, and Qi Ouyang. "Synthesizing a Novel Genetic Sequential Logic Circuit: a Push-on Push-off Switch." Molecular Systems Biology 6 (2010). Print.
Strickland, D., K. Moffat, and T. R. Sosnick. "Light-activated DNA Binding in a Designed Allosteric Protein." Proceedings of the National Academy of Sciences 105.31 (2008): 10709-0714. Print.
Bacterial Full Adder
Zhang, Shifang , Charles Ma, and Martin Chalfie . "Combinatorial Marking of Cells and Organelles with Reconstituted Fluorescent Proteins." Cell. 119.1 (2004): 137-144.
Ghosh, Indraneel, Andrew D. Hamilton, and Lynne Regan. "Antiparallel Leucine Zipper-Directed Protein Reassembly: Application to the Green Fluorescent Protein." Journal of the American Chemical Society. 122. (2000): 5658-5659.
MYS!S
Ananthanarayanan, Vaishnavi, and William Thies. "BioCoder: A Programming Language for Standardizing and Automating Biology Protocols." Journal of Biological Engineering 4.1 (2010): 13. Print.
Modeling
Chandran, Deepak, Frank T. Bergmann, and Herbert M. Sauro. "TinkerCell: Modular CAD Tool for Synthetic Biology." Journal of Biological Engineering 3.1 (2009): 19. Print.
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