Team:ULB-Brussels/mat

From 2011.igem.org

Revision as of 13:27, 21 September 2011 by Zeb (Talk | contribs)

Sponsors

Primers

The following primers were produced by Sigma-Aldrich (option desalt)

Yeast cloning:

  • PKD46-FOR:

5’-  gagcaaaaggccagcaaaaggccaggaaccgtaaaaaggctgccacctgcatcgatttat-3’

  • PKD46-REV:

5’-cgtgagttttcgttccactgagcgtcagaccccgtagaaagagttttcgttccactgagc-3’

  • PFL-FOR:

5’-gcctttttacggttcctggc-3’

  • PFL-REV:

5’-tttctacgggggtctgacgc-3’

  • PCP-FOR:

5’-tggctcttgtatctatcagtgaagcatcaagactaacaaatcagccaaacgtctcttcag-3’

  • PCP-REV:

5’-ggggctgtatgcacaaagcatcttctgttgagttaagaacttatatgcgtctatttatgtagg-3’


In green is the 40 homologous nucleotides need for the yeast cloning.

Yeast cloning verification:

  • FLP/CI-FOR:

5’-acatggcgagttttgacgag-3’

  • FLP/CI-REV:

5’-accacactagagaacatactg-3’

pINDEL sequencing:

  • pID-seq1:

5’-aggatcttcacctagatcctt-3’

  • pID-seq2:

 5’-gatgggctagtcaatgataatta-3’

  • pID-seq3:

5’-ccgttacgtaggtaggaatc-3’

  • pID-seq4:

5’-agatggggatggggcagtc-3’

  • pID-seq5:

5’-gatttcggatcaacgttcttaat-3’

  • pID-seq6:

5’-caatcactttcgtctactcc-3’

  • pID-seq7:

 5’-ccagatatttcgccgcgac-3’

  • pID-seq8:

5’-cggggccagcaaaaaatcca-3’

  • pID-seq9:

5’-ccctgatttttcaccacccc-3’

  • pID-seq10:

5’-cttccgaaaatgcaacgcga-3’

Biobrick frt’-cm-frt’

  • FRT’-CM-FRT’-FOR:

5’-gaagttcctatactttttagagaataggaacttcgttgatcgggcacgtaagagg-3’

  • FRT'-CM-FRT'-REV :

5’-gaagttcctattctctaaaaagtataggaacttcttattacgccccgccctgcc-3’

In green is the frt’ sequence which is not homologous with the chloramphenicol gene.

  • TOPO-FRT'-CM-FRT'-FOR:

5'-tccggcaaaaaagggcaaggtgtcaccaccctgcccttttcgccagtgtgctggatttc-3'

  • TOPO-FRT'-CM-FRT'-REV:

5’-tgcagcggccgctactagtactctagaagcggccgcgaatgatggatatctgcagatttc-3’

In red is the iGEM restriction sites (prefix and suffix) and in green is the mutation made to suppress the EcoRI restriction site (in the Topo® XL PCR plasmid).

Biobrick FRT'-CM-FRT' sequencing (primer M13 as described in Topo® XL PCR Kit)

  • FRT’-CM-FRT’-SEQ-FOR:

5’-gaggaaacagctatga-3’

  • FRT’-CM-FRT’-SEQ-REV:

 5’-gaccggcagcaaatg-3’

iGEM ULB Brussels Team - Contact us