Team:ULB-Brussels/mat
From 2011.igem.org
Primers
The following primers were produced by Sigma-Aldrich (option desalt)
Yeast cloning:
- PKD46-FOR:
5’- gagcaaaaggccagcaaaaggccaggaaccgtaaaaaggctgccacctgcatcgatttat-3’
- PKD46-REV:
5’-cgtgagttttcgttccactgagcgtcagaccccgtagaaagagttttcgttccactgagc-3’
- PFL-FOR:
5’-gcctttttacggttcctggc-3’
- PFL-REV:
5’-tttctacgggggtctgacgc-3’
- PCP-FOR:
5’-tggctcttgtatctatcagtgaagcatcaagactaacaaatcagccaaacgtctcttcag-3’
- PCP-REV:
5’-ggggctgtatgcacaaagcatcttctgttgagttaagaacttatatgcgtctatttatgtagg-3’
In green is the 40 homologous nucleotides need for the yeast cloning.
Yeast cloning verification:
- FLP/CI-FOR:
5’-acatggcgagttttgacgag-3’
- FLP/CI-REV:
5’-accacactagagaacatactg-3’
pINDEL sequencing:
- pID-seq1:
5’-aggatcttcacctagatcctt-3’
- pID-seq2:
5’-gatgggctagtcaatgataatta-3’
- pID-seq3:
5’-ccgttacgtaggtaggaatc-3’
- pID-seq4:
5’-agatggggatggggcagtc-3’
- pID-seq5:
5’-gatttcggatcaacgttcttaat-3’
- pID-seq6:
5’-caatcactttcgtctactcc-3’
- pID-seq7:
5’-ccagatatttcgccgcgac-3’
- pID-seq8:
5’-cggggccagcaaaaaatcca-3’
- pID-seq9:
5’-ccctgatttttcaccacccc-3’
- pID-seq10:
5’-cttccgaaaatgcaacgcga-3’
Biobrick frt’-cm-frt’
- FRT’-CM-FRT’-FOR:
5’-gaagttcctatactttttagagaataggaacttcgttgatcgggcacgtaagagg-3’
- FRT'-CM-FRT'-REV :
5’-gaagttcctattctctaaaaagtataggaacttcttattacgccccgccctgcc-3’
In green is the frt’ sequence which is not homologous with the chloramphenicol gene.
- TOPO-FRT'-CM-FRT'-FOR:
5'-tccggcaaaaaagggcaaggtgtcaccaccctgcccttttcgccagtgtgctggatttc-3'
- TOPO-FRT'-CM-FRT'-REV:
5’-tgcagcggccgctactagtactctagaagcggccgcgaatgatggatatctgcagatttc-3’
In red is the iGEM restriction sites (prefix and suffix) and in green is the mutation made to suppress the EcoRI restriction site (in the Topo® XL PCR plasmid).
Biobrick FRT'-CM-FRT' sequencing (primer M13 as described in Topo® XL PCR Kit)
- FRT’-CM-FRT’-SEQ-FOR:
5’-gaggaaacagctatga-3’
- FRT’-CM-FRT’-SEQ-REV:
5’-gaccggcagcaaatg-3’