Team:UST-Beijing/Notebook

From 2011.igem.org

Revision as of 06:56, 12 September 2011 by Zhoulujun (Talk | contribs)


Contents

Project 2.

1.1:The construction of pSB1AC3/PR

<img src="1.1PR%E7%89%87%E6%AE%B5.jpg" width="250" height="150"/> <img src="1.2PsB1AC3_map.jpg" width="300" height="191" /> <img src="1.3%E5%B5%8C%E5%85%A5PR%E8%B4%A8%E7%B2%92.jpg" width="300" height="225"/>




 

 

 

 

 

 

 

 

PR + pSB1AC3 = pSB1AC3/PR (new part)

Cut PR w/EcoRI & SpeI

Cut pSB1AC3 w/EcoRI & SpeI

Combine the insert and vector with T4 ligase

1.2: Gel electrophoresis


<img src="2pSB1AC3_EcoRI%26SpeI%E5%8F%8C%E9%85%B6%E5%88%87%E9%AA%8C%E8%AF%81.jpg" width="400" height="257"/> 1: wide range maker
   
2、3、4、5:the constructed plasmid cutted with SpeI and EcoRI restriction enzymes




 

 

 

 

 

 

 

 

 

 

1.3: DNA sequencing

<img src="3%E6%B5%8B%E5%BA%8F%E7%BB%93%E6%9E%9C.PNG" width="640"/>
The result of DNA sequencing demonstrates that there is no mutation in the new part by comparing to the original sequence.


 

2.1 The construction of pSG5/PR which is used for eukaryotic expression

<img src="PR_for_pSG5.jpg" width="313" height="89" /><img src="PSG5.JPG" width="321" height="231" /><img src="PSG5PR.jpg" width="321" height="244" />

PR + pSG5 = pSG5/PR
Cut PR w/EcoRI & BamH I
Cut pSG5 w/EcoRI & BamH I
Combine the insert and vector with T4 ligase

2.3 DNA sequencing

<img src="2.3.PNG" width="781" height="496" />

The result of DNA sequencing demonstrates that there is no mutation in PR by comparing to the original sequence.

3.1  The construction of pBABE/PR

1) PCR for amplifying more insert
Primer 1:         5'-ggg gaa ttc taa acc acc atg ctt gcc-3'
Primer 2:         5'-aaa gaa ttc tca cta tta ggc gtt gct-3'
Reaction system:
10XPCR buffer      5ul
dNTP                    4ul
primer 1                1ul
primer 2                2ul
pfu                     1ul
template               1ul
DMSO                 5ul
ddH2O                31ul
Total                  50ul
Reaction condition:
95℃       5min
95℃       15s
52℃       15s
72℃       2min
72℃       10min
4℃        ∞
2) Ligation

<img src="PR.jpg" width="256" height="80" /><img src="PBABE.jpg" width="355" height="289" /><img src="PBABEPR.jpg" width="295" height="266" />

PR + pBABE = pBABE/PR
Cut PR w/EcoRI
Cut pBABE w/EcoRI
Combine the insert and vector with T4 ligase

3.2 Gel electrophoresis

<img src="EcoR1%E9%AA%8C%E8%AF%81.jpg" width="162" height="248" /><img src="Sal1%E9%AA%8C%E8%AF%81.jpg" width="164" height="247" hspace="100" />

1:Middle range maker</a>     1:DL2,000 DNA Marker

2:cut with EcoR I      2:cut with Sal I

Figure 1 indicates that the insert is combined with the vector successfully.
Figure 2 indicates that the insert is in the right direction.

3.3 DNA sequencing

<img src="3.3.jpg" width="558" height="349" />

As before, the result of DNA sequencing demonstrates that there is no mutation in PR by comparing to the original sequence.

 

 


</html>

Notebook

You should make use of the calendar feature on the wiki and start a lab notebook. This may be looked at by the judges to see how your work progressed throughout the summer. It is a very useful organizational tool as well.