green light receptor
New Ligation of CcaS into pSB1K3
Investigators:Julia
PCR
to amplify CcaS from original Synechocystis-genome
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PCR-Mixture for one Reaction:
For a 50 µl reaction use
32,5µl
| H20
| Name
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10µl
| 5x Phusion Buffer
| of Primer
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2.5µl
| Primer fw
| P5
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2.5µl
| Primer dw
| P7
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1µl
| dNTPs
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1µl
| DNA-Template
| synechocystis,strain Pll6903
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0.5 µl
| Phusion (add in the end)
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Precipitator
Ligation
Name: Ruediger
| Date: 20.07
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Continue from Experiment Digestion Date 19.07 Name Ruediger
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Project Name: GFP Pbd
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Procedure
PCR tube:
total volume 20 μl
- add H2O (17 μl -X-Y-Z)
- add 2 μl Ligase Buffer 10x
- add Insert 1, Insert 2(when proceeding from 3A digestion use 2 μl of each)
- add Vector (20ng needed. When proceeding from 3A digestion use 2 μl)
- Add 1 μl T4-DNA Ligase
- Incubate 10-30 min at room temperature
- heat for 20 minutes at 80°C
- store at -20°C or directly proceed to transformation
| Name of part
| Ratio Insert:Vector
= 3:1 or 1:1
| Volume (μl)
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X insert 1
| --
| --
| --
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Y insert 2
| M14+P28+P18/19/20
| 2.7:1
| 2 each
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Z vector
| S39 / S40
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| 2 each
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H2O
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Documentation:
Why are you doing this experiment? Where are your parts stored? Name the parts for ligation etc.
Ligation of 3 different GFP Pbd part (M14+P28+P18/19/20) into two vector with Promotor and RBS
S39 + M14+P28+P18
S39 + M14+P28+P19
S39 + M14+P28+P20
S43 + M14+P28+P18
S43 + M14+P28+P19
S43 + M14+P28+P20
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Transformation
Name: Ruediger
| Date: 20.07
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Continue from Experiment Ligation Date 19.07 Name Ruediger
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Project Name: GFP Pbd
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Procedure
- take cells from -80°C freezer and put them on ice! (every eppi contains about 400 μl cells)
- thaw cells on ice 20 minutes
- pipette 50 μl cells and 2 μl DNA into eppi still on ice!
- Incubate for 30 minutes on ice
- Heat at 42°C for 60 sec
- Incubate on ice for 5 minutes
- Add 200 μl LB Broth
- Incubate for 2 hours at 37°C (cells with lysis cassette at 30°C!!)
- Plate 50 μl and 200μl on two different LB/Agar plates with appropriate antibiotic resistance
Documentation:
Why are you doing this experiment? Name of the sample? Where are they stored? Name the vector with inserts, antibiotika resistance etc.
1 S39 + M14+P28+P18
2 S39 + M14+P28+P19
3 S39 + M14+P28+P20
4 S43 + M14+P28+P18
5 S43 + M14+P28+P19
6 S43 + M14+P28+P20
All have cm resistance
in incubator 37°C overnight
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