Team:Arizona State/Project/References

From 2011.igem.org

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# <div id="ref14">E. Westra ''et al'', “H-NS-mediated repression of CRISPR-based immunity in ''Escherichia coli'' K12 can be relieved by the transcription activator LeuO,” Molecular Microbiology, vol. 77, no. 6, pp. 1380-1393, 18 Aug. 2010.</div>
# <div id="ref14">E. Westra ''et al'', “H-NS-mediated repression of CRISPR-based immunity in ''Escherichia coli'' K12 can be relieved by the transcription activator LeuO,” Molecular Microbiology, vol. 77, no. 6, pp. 1380-1393, 18 Aug. 2010.</div>
# <div id="ref15">N. Held ''et al'', “CRISPR Associated Diversity within a Population of ''Sulfolobus islandicus'',” PLoS ONE, vol. 5, no. 9, 28 Sept. 2010.</div>
# <div id="ref15">N. Held ''et al'', “CRISPR Associated Diversity within a Population of ''Sulfolobus islandicus'',” PLoS ONE, vol. 5, no. 9, 28 Sept. 2010.</div>
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# <div id="ref16">K. Palmer and M. Gilmore, “Multidrug-Resistant Enterococci Lack CRISPR-''cas'',” mBio, vol. 1, no. 4, 12 Oct. 2010.</div>
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# <div id="ref16">J. Carte ''et al'', “Binding and cleavage of CRISPR RNA by Cas6,” RNA, 30 Sept. 2010.</div>
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# <div id="ref17">E. Sontheimer and L. Marraffini, “Slicer for DNA,” Nature, vol. 468, pp. 45-46, 4 Nov. 2010.</div>
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# <div id="ref17">K. Palmer and M. Gilmore, “Multidrug-Resistant Enterococci Lack CRISPR-''cas'',” mBio, vol. 1, no. 4, 12 Oct. 2010.</div>
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# <div id="ref18">D. Pride ''et al'', “Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time,” Genome Research, vol. 21, pp. 126-136, 13 Dec. 2010.</div>
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# <div id="ref18">H. Deveau ''et a'', “CRISPR/Cas System and Its Role in Phage-Bacteria Interactions,” Annu. Rev. Microbiol., 13 Oct. 2010.</div>
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# <div id="ref19">R. Garrett ''et al'', “CRISPR-based immune systems of the Sulfolobales: complexity and diversity,” Biochem. Soc. Trans., vol. 39, pp. 51-57, 19 Jan. 2011.</div>
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# <div id="ref19">E. Sontheimer and L. Marraffini, “Slicer for DNA,” Nature, vol. 468, pp. 45-46, 4 Nov. 2010.</div>
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# <div id="ref20">F. Rezzonico ''et al'', “Diversity, Evolution, and Functionality of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Regions in the Fire Blight Pathogen ''Erwinia amylovora'',” Applied and Environmental Microbiology, vol. 77, no. 11, pp. 3819-3829, 24 Mar. 2011.</div>
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# <div id="ref20">D. Pride ''et al'', “Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time,” Genome Research, vol. 21, pp. 126-136, 13 Dec. 2010.</div>
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# <div id="ref21">E. Deltcheva ''et al'', “CRISPR RNA maturation by ''trans''-encoded small RNA and host factor RNase III,” Nature, vol. 471, no. 7340, pp. 602-607, 30 Mar. 2011.</div>
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# <div id="ref21">R. Garrett ''et al'', “CRISPR-based immune systems of the Sulfolobales: complexity and diversity,” Biochem. Soc. Trans., vol. 39, pp. 51-57, 19 Jan. 2011.</div>
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# <div id="ref22">M. Jore ''et al'', “Structural basis for CRISPR RNA-guided DNA recognition by Cascade,” Nature Structural & Molecular Biology, vol. 18, pp. 529-536, 3 Apr. 2011.</div>
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# <div id="ref22">F. Rezzonico ''et al'', “Diversity, Evolution, and Functionality of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Regions in the Fire Blight Pathogen ''Erwinia amylovora'',” Applied and Environmental Microbiology, vol. 77, no. 11, pp. 3819-3829, 24 Mar. 2011.</div>
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# <div id="ref23">T. Nozawa ''et al'', “CRISPR Inhibition of Prophage Acquisition in ''Streptococcus pyogenes'',” PLoS ONE, vol. 6, no. 5, 6 May 2011.</div>
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# <div id="ref23">E. Deltcheva ''et al'', “CRISPR RNA maturation by ''trans''-encoded small RNA and host factor RNase III,” Nature, vol. 471, no. 7340, pp. 602-607, 30 Mar. 2011.</div>
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# <div id="ref24">K. S. Makarova ''et al'', “Evolution and classification of the CRISPR–Cas systems,” Nature Reviews Microbiology, vol. 9, pp. 467-477, 9 May 2011.</div>
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# <div id="ref24">M. Jore ''et al'', “Structural basis for CRISPR RNA-guided DNA recognition by Cascade,” Nature Structural & Molecular Biology, vol. 18, pp. 529-536, 3 Apr. 2011.</div>
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# <div id="ref25">D. Sashital ''et al'', “An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3,” Nature Structural & Molecular Biology, vol. 18, pp. 680-687, 15 May 2011.</div>
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# <div id="ref25">T. Nozawa ''et al'', “CRISPR Inhibition of Prophage Acquisition in ''Streptococcus pyogenes'',” PLoS ONE, vol. 6, no. 5, 6 May 2011.</div>
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# <div id="ref26">E. Gesner ''et al'', “Recognition and maturation of effector RNAs in a CRISPR interference pathway,” Nature Structural & Molecular Biology, vol. 18, no. 6, pp. 688-692, 15 May 2011.</div>
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# <div id="ref26">K. S. Makarova ''et al'', “Evolution and classification of the CRISPR–Cas systems,” Nature Reviews Microbiology, vol. 9, pp. 467-477, 9 May 2011.</div>
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# <div id="ref27">C. Skennerton ''et al'', “Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System,” PLoS ONE, vol. 6, no. 5, 18 May 2011.</div>
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# <div id="ref27">D. Sashital ''et al'', “An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3,” Nature Structural & Molecular Biology, vol. 18, pp. 680-687, 15 May 2011.</div>
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# <div id="ref28">W. Fricke ''et al'', “Comparative Genomics of 28 ''Salmonella enterica'' Isolates: Evidence for CRISPR-mediated Adaptive Sublineage Evolution,” J. Bacteriology, 20 May 2011.</div>
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# <div id="ref28">E. Gesner ''et al'', “Recognition and maturation of effector RNAs in a CRISPR interference pathway,” Nature Structural & Molecular Biology, vol. 18, no. 6, pp. 688-692, 15 May 2011.</div>
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# <div id="ref29">E. Semenova ''et al'', “Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence,” PNAS, 6 Jun. 2011.</div>
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# <div id="ref29">C. Skennerton ''et al'', “Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System,” PLoS ONE, vol. 6, no. 5, 18 May 2011.</div>
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# <div id="ref30">W. Fricke ''et al'', “Comparative Genomics of 28 ''Salmonella enterica'' Isolates: Evidence for CRISPR-mediated Adaptive Sublineage Evolution,” J. Bacteriology, 20 May 2011.</div>
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# <div id="ref31">E. Semenova ''et al'', “Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence,” PNAS, 6 Jun. 2011.</div>
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# <div id="ref32">K. Phok ''el al'', “Identification of CRISPR and riboswitch related RNAs among novel non-coding RNAs of the euryarchaeon Pyrococcus abyss,” BMC Genomics, 13 Jun. 2011.</div>
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# <div id="ref33">K. Kyun ''et al'', “Crystal Structure of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated Csn2 Protein Revealed Ca<sup>2+</sup>-dependent Double-stranded DNA-binding Activity,” J Biol Chem., 21 Jun. 2011.</div>
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# <div id="ref34">J. Howard ''et al'', “Helicase dissociation and annealing of RNA-DNA hybrids by ''Escherichia coli'' Cas3 protein,” Biochem. J., 23 Jun. 2011.</div>

Revision as of 17:21, 30 June 2011