Team:Kyoto/Material

From 2011.igem.org

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(Strains(E.Coli))
(Strains(E.Coli))
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</table>
==Strains(E.Coli)==
==Strains(E.Coli)==
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<table class="materials">
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{| class="materials"
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<tr>
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!Name||Genotype and/or Relevant Features||Source or Reference
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<th>Name</th><th>Genotype and/or Relevant Features</th><th>Source or Reference
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|-
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</th></tr>
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| JM109
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<tr>
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| <i>end</i>A, <i>rec</i>A1, <i>gyr</i>A96,<i>thi</i>,<i>hsd</i>R17,(r<sub>κ</sub><sup>-</sup>,m<sub>κ</sub><sup>+</sup>),<i>rel</i>A1, <i>sup</i>E44,λ<sup>-</sup>,&Delta;(<i>lac-pro</i>AB),[F',<i>tra</i>D36,<i>pro</i>AB,<i>lac</i>l<sup>q</sup><i>Z</i>&Delta;M15]
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<td>JM109</td><td><i>end</i>A, <i>rec</i>A1, <i>gyr</i>A96,<i>thi</i>,<i>hsd</i>R17,(r<sub>κ</sub><sup>-</sup>,m<sub>κ</sub><sup>+</sup>),<i>rel</i>A1, <i>sup</i>E44,
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|Promega[http://www.promega.com/products/cloning-and-dna-markers/cloning-tools-and-competent-cells/bacterial-strains-and-competent-cells/bacterial-strain-jm109_de3_/]
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λ<sup>-</sup>,&Delta;(<i>lac-pro</i>AB),[F',<i>tra</i>D36,<i>pro</i>AB,<i>lac</i>l<sup>q</sup><i>Z</i>&Delta;M15]
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|-
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<td>Promega[http://www.promega.com/products/cloning-and-dna-markers/cloning-tools-and-competent-cells/bacterial-strains-and-competent-cells/bacterial-strain-jm109_de3_/]
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| BW25113
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</td></tr>
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| ∆(araD-araB)567, ∆lacZ4787(::rrnB-3), lambda-, rph-1, ∆(rhaD-rhaB)568, hsdR514
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| E.coliwiki[http://ecoliwiki.net/colipedia/index.php/BW25113]
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BW25113
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|}
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∆(araD-araB)567, ∆lacZ4787(::rrnB-3), lambda-, rph-1, ∆(rhaD-rhaB)568, hsdR514  
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E.coliwiki[http://ecoliwiki.net/colipedia/index.php/BW25113]
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==Primers==
==Primers==

Revision as of 22:13, 4 October 2011

Contents

Materials

Strain(Fruits Fly)

NameGenotype and/or Relevant FeaturesSource or Reference
D.melanogaster(fly)Oregon-R-CDGRC[http://kyotofly.kit.jp/cgi-bin/stocks/search_res_det.cgi?DB_NUM=1&DG_NUM=105669]

Strains(E.Coli)

NameGenotype and/or Relevant FeaturesSource or Reference
JM109 endA, recA1, gyrA96,thi,hsdR17,(rκ-,mκ+),relA1, supE44,λ-,Δ(lac-proAB),[F',traD36,proAB,laclqZΔM15] Promega[http://www.promega.com/products/cloning-and-dna-markers/cloning-tools-and-competent-cells/bacterial-strains-and-competent-cells/bacterial-strain-jm109_de3_/]
BW25113 ∆(araD-araB)567, ∆lacZ4787(::rrnB-3), lambda-, rph-1, ∆(rhaD-rhaB)568, hsdR514 E.coliwiki[http://ecoliwiki.net/colipedia/index.php/BW25113]

Primers

DateNameSequence
07/21S Forward (Same as SRRz Forward)gGAATTCGCGGCCGCTTCTAGAGgcctggatttgttctatcagtaatcga
07/21S ReverseCTGCAGCGGCCGCTACTAGTAttattgatttctaccatcttctactccggc
07/21SRRz ReverseCTGCAGCGGCCGCTACTAGTAtgagttgcccatcgatatgggc
07/28ΔTMD1 Forwardcgcggcagatataatggcggt
07/28ΔTMD1 Reversegtcatgtttttctggcatcttcatgtct
08/19, 08/24Sam7 Forwardggttcattcgtgaccttctcgacttc
08/19, 08/24Sam7 Reverseaggcgataatggcgcacatc
08/20SRRz Forward RetrygGAATTCGCGGCCGCTTCTAGAGgagcaaatccccttattgggggtaagacatg
08/20SRRz Reverse RetryCTGCAGCGGCCGCTACTAGTAgcaactctatctgcactgctcattaatatacttctgg
08/23, 08/24Deletion of Upstream Forwardgagcaaatccccttattgggggtaagacatg
08/23, 08/24Deletion of Upstream Reversectctagaagcggccgcgaattcc
09/13, 09/22Add J23105 ForwardCAGTCCTAGGTACTATGCTAGCtactagtagcggccgctgc
09/13, 09/22Add J23105 ReverseAGCTAGCCGTAAActctagtatataaacgcagaaaggcccacc
10/10Deletion of GFP Forward (Primer1)ccaggcatcaaataaaacgaaaggctc
10/10Deletion of GFP-DT Forward (Primer2)tactagtagcggccgctgc
10/10Deletion of GFP, GFP-DT Reverse (Primer3)ctctagtattattgatttctaccatcttctactcc
- VF2 (<partinfo>G00100</partinfo>)tgccacctgacgtctaagaa
- VF (<partinfo>G00101</partinfo>)attaccgcctttgagtgagc