Team:NCTU Formosa/modeling
From 2011.igem.org
(Difference between revisions)
Jennyjeson (Talk | contribs) |
|||
Line 45: | Line 45: | ||
ul#cm-nav ul { | ul#cm-nav ul { | ||
list-style-type: none; | list-style-type: none; | ||
- | margin: | + | margin: 0 0 0 10px; |
list-style-image: none; | list-style-image: none; | ||
padding: 0px | padding: 0px | ||
Line 168: | Line 168: | ||
#cm-nav a { | #cm-nav a { | ||
background-color: black; | background-color: black; | ||
- | border-color: | + | border-color: black; |
- | font-weight: | + | font-weight: bold; |
font-family: Calibri, Verdana, helvetica, sans-serif; | font-family: Calibri, Verdana, helvetica, sans-serif; | ||
font-size: 12pt; | font-size: 12pt; | ||
Line 175: | Line 175: | ||
padding-left: 10px; | padding-left: 10px; | ||
padding-right: 10px; | padding-right: 10px; | ||
- | padding-top: | + | padding-top: 0px; |
- | padding-bottom: | + | padding-bottom: 0px; |
} | } | ||
+ | |||
/*content*/ | /*content*/ | ||
Line 193: | Line 194: | ||
font-size: 14px; | font-size: 14px; | ||
color: white; | color: white; | ||
+ | } | ||
+ | |||
+ | #banner{ position:relative; | ||
+ | margin-left: 10px; | ||
+ | background-color: black; | ||
+ | height:240px; | ||
+ | width: 944px; | ||
} | } | ||
Line 200: | Line 208: | ||
margin-top:-3px; | margin-top:-3px; | ||
background-color: #000066; | background-color: #000066; | ||
- | filter:alpha(opacity= | + | filter:alpha(opacity=90);opacity:0.9;zoom:1; |
height:auto; | height:auto; | ||
- | width: | + | width: 924px; |
} | } | ||
Line 219: | Line 227: | ||
filter:alpha(opacity=95);opacity:0.95;zoom:1; | filter:alpha(opacity=95);opacity:0.95;zoom:1; | ||
height:auto; | height:auto; | ||
- | width: | + | width: 924px; |
} | } | ||
Line 233: | Line 241: | ||
margin: 0px 0px 0px 10px; | margin: 0px 0px 0px 10px; | ||
background-color: #ede8e2 ; | background-color: #ede8e2 ; | ||
- | filter:alpha(opacity= | + | filter:alpha(opacity=98);opacity:0.98;zoom:1; |
height:auto; | height:auto; | ||
- | width: | + | width: 864px; |
} | } | ||
Line 243: | Line 251: | ||
font-variant: normal; | font-variant: normal; | ||
direction:ltr; | direction:ltr; | ||
- | padding: 10px 40px | + | padding: 10px 40px 20px 40px; |
text-align: justify; | text-align: justify; | ||
} | } | ||
+ | |||
+ | #linkBox { position:absolute; | ||
+ | margin-left: -40px; | ||
+ | margin-bottom: -10px; | ||
+ | margin-top:-10px; | ||
+ | background-color: #000066; | ||
+ | filter:alpha(opacity=80);opacity:0.8;zoom:1; | ||
+ | height:auto; | ||
+ | width: 924px; | ||
+ | |||
+ | } | ||
+ | #linkBox { color: white; | ||
+ | font-family: Calibri, Verdana, helvetica, sans-serif; | ||
+ | font-weight: bold; | ||
+ | font-size: 18px; | ||
+ | font-variant: normal; | ||
+ | direction:ltr; | ||
+ | padding-left: 20px; | ||
+ | |||
+ | } | ||
+ | |||
+ | |||
#sideBox { position: absolute; | #sideBox { position: absolute; | ||
top: 304px; | top: 304px; | ||
Line 253: | Line 283: | ||
background-color: #ede8e2; | background-color: #ede8e2; | ||
} | } | ||
- | + | h2{font-family: Calibri, Verdana, helvetica, sans-serif; | |
+ | font-size: 20px; | ||
+ | font-weight: bold; | ||
+ | } | ||
</style> | </style> | ||
</head> | </head> | ||
Line 259: | Line 292: | ||
<body> | <body> | ||
- | + | ||
+ | <div id="banner"><a href = "https://2011.igem.org/Team:NCTU_Formosa"><img src = "https://static.igem.org/mediawiki/2011/8/8c/Banner010.jpg" height="236" width="944"/></a></div> | ||
Line 267: | Line 301: | ||
<ul> | <ul> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/members">Members</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/members">Members</a></li> | ||
- | <li><a href=" | + | <li><a href="http://www.nctu.edu.tw/english/index.php">School</a></li> |
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/gallery">Gallery</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/gallery">Gallery</a></li> | ||
</ul> | </ul> | ||
Line 278: | Line 312: | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/RNA_design">Design</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/RNA_design">Design</a></li> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/RNA_data">Data</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/RNA_data">Data</a></li> | ||
- | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/RNA_discussion"> | + | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/RNA_discussion">Modeling</a></li> |
</ul> | </ul> | ||
</li> | </li> | ||
Line 285: | Line 319: | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/CI_design">Design</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/CI_design">Design</a></li> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/CI_data">Data</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/CI_data">Data</a></li> | ||
- | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/CI_discussion"> | + | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/CI_discussion">Modeling</a></li> |
</ul> | </ul> | ||
</li> | </li> | ||
Line 292: | Line 326: | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/CSP_design">Design</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/CSP_design">Design</a></li> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/CSP_data">Data</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/CSP_data">Data</a></li> | ||
- | |||
</ul> | </ul> | ||
</li> | </li> | ||
Line 299: | Line 332: | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/BP_design">Design</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/BP_design">Design</a></li> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/BP_data">Data</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/BP_data">Data</a></li> | ||
- | |||
</ul> | </ul> | ||
</li> | </li> | ||
Line 306: | Line 338: | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/VP_design">Design</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/VP_design">Design</a></li> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/VP_data">Data</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/VP_data">Data</a></li> | ||
- | |||
</ul> | </ul> | ||
</li> | </li> | ||
</ul> | </ul> | ||
</li> | </li> | ||
- | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/modeling"> | + | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/modeling">Measurements</a></li> |
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/parts">Parts</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/parts">Parts</a></li> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/safty">Safety</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/safty">Safety</a></li> | ||
- | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/contributions"> | + | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/humanpractice">Human Practice</a></li> |
+ | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/contributions">Attribution</a></li> | ||
<li><a class="arrow no-click">Notebook </a> | <li><a class="arrow no-click">Notebook </a> | ||
<ul> | <ul> | ||
Line 320: | Line 352: | ||
<ul> | <ul> | ||
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/protocol">Mutation</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/protocol">Mutation</a></li> | ||
- | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/protocol_F">Flow</a></li> | + | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/protocol_F">Flow Cytometry</a></li> |
<li><a href="https://2011.igem.org/Team:NCTU_Formosa/protocol_G">GC</a></li> | <li><a href="https://2011.igem.org/Team:NCTU_Formosa/protocol_G">GC</a></li> | ||
</ul> | </ul> | ||
Line 328: | Line 360: | ||
</ul> | </ul> | ||
- | + | <br><br> | |
- | <div | + | <div id="blueBox"><p>Modeling</p></div> |
+ | <div id="Box"><h2> Modeling and simulations of high temperature induced device BBa_K098995 – cI promoter & cI repressor | ||
+ | </h2> | ||
- | </ | + | <p> In order to characterize this high temperature induced device <a href=" http://partsregistry.org/Part:BBa_K098995">BBa_K098995</a>, the fluorescence intensity of<a href=" http://partsregistry.org/Part:BBa_K098988">BBa_K098988</a> is measured by the flow cytometry (Figure. 1). |
- | </ | + | <div><img src = https://static.igem.org/mediawiki/2011/e/e4/M-1.1.JPG |
+ | <br><b> Figure1. Part BBa_K098988 Design. The heat induced device BBa_K098995 uses gene BBa_K098997 coding for cI repressor to inhibit the cI promoter BBa_R0051. The activity of cI repressor is decreased by elevating temperature from 30 ℃ to 42 ℃. </b> | ||
+ | A differential equation is used to calculate protein expression activity of BBa_K098995 as follows. |
Revision as of 12:58, 4 October 2011
Modeling
Modeling and simulations of high temperature induced device BBa_K098995 – cI promoter & cI repressor
In order to characterize this high temperature induced device BBa_K098995, the fluorescence intensity ofBBa_K098988 is measured by the flow cytometry (Figure. 1).
Figure1. Part BBa_K098988 Design. The heat induced device BBa_K098995 uses gene BBa_K098997 coding for cI repressor to inhibit the cI promoter BBa_R0051. The activity of cI repressor is decreased by elevating temperature from 30 ℃ to 42 ℃.
A differential equation is used to calculate protein expression activity of BBa_K098995 as follows.