Team:HokkaidoU Japan/Project/T3SS

From 2011.igem.org

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[[Image:HokkaidoU_T3SS_Fig4.jpg|right|thumb|300px|Fig. 4<br>Procedures of infection assay]]
[[Image:HokkaidoU_T3SS_Fig4.jpg|right|thumb|300px|Fig. 4<br>Procedures of infection assay]]
&nbsp;&nbsp;&nbsp;We transferred E. coli [SPI-2/ T3 Signal-GFP, RFP] overnight LB culture to the neutral pH Mg2+minimal medium (MgM pH=7.2) and cultured for 4 hrs with arabinose to accumulate sufficient amount of GFP fusion protein (i). Then the bacteria were transferred to acidic pH Mg2+ minimal medium (MgM pH=5.0) and cultured for 4 hrs with arabinose to assemble T3 secretion apparatus[7] (ii). After that, bacteria were washed three times to remove contaminants that may detrimental for eukaryotic cell (iii). Since T3SS encoded in SPI-2 is known to be function inside of the phagosome of the target cell[8], the bacteria were exposed to the cells (RK13) under acidic pH condition (pH=5.0), which is considered to be similar to the environment inside of the phagosome.
&nbsp;&nbsp;&nbsp;We transferred E. coli [SPI-2/ T3 Signal-GFP, RFP] overnight LB culture to the neutral pH Mg2+minimal medium (MgM pH=7.2) and cultured for 4 hrs with arabinose to accumulate sufficient amount of GFP fusion protein (i). Then the bacteria were transferred to acidic pH Mg2+ minimal medium (MgM pH=5.0) and cultured for 4 hrs with arabinose to assemble T3 secretion apparatus[7] (ii). After that, bacteria were washed three times to remove contaminants that may detrimental for eukaryotic cell (iii). Since T3SS encoded in SPI-2 is known to be function inside of the phagosome of the target cell[8], the bacteria were exposed to the cells (RK13) under acidic pH condition (pH=5.0), which is considered to be similar to the environment inside of the phagosome.
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[[Image:HokkaidoU_T3SS_Fig5.jpg|right|thumb|300px|Fig. 5<br>Injection of effector proteins]]
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[[Image:HokkaidoU_T3SS_Fig5.jpg|left|thumb|500px|Fig. 5<br>Injection of effector proteins]]
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&nbsp;&nbsp;&nbsp;Under the acidic pH condition after the neutral pH, T3 apparatus should be assembled (i) however, only the translocator proteins are secreted through T3SS and effector proteins are not, because the regulatory complex blocks the effectors at the base of the needle (ii). However once the translocator complex assembled a pore on the Target cell membrane the T3SS can sense the neutral pH condition of the cytosol (iii) and this pH elevation removes the regulatory complex from the base of the needle (iv) to start secretion of effectors. After exposure the cells were incubated at 37C in 5.0% CO2. At the same time E.coli [SPI-2/ T3S signal-GFP, RFP] and E. coli [SPI-2 only] cultured in the absence of arabinose were prepared as controls.
&nbsp;&nbsp;&nbsp;Under the acidic pH condition after the neutral pH, T3 apparatus should be assembled (i) however, only the translocator proteins are secreted through T3SS and effector proteins are not, because the regulatory complex blocks the effectors at the base of the needle (ii). However once the translocator complex assembled a pore on the Target cell membrane the T3SS can sense the neutral pH condition of the cytosol (iii) and this pH elevation removes the regulatory complex from the base of the needle (iv) to start secretion of effectors. After exposure the cells were incubated at 37C in 5.0% CO2. At the same time E.coli [SPI-2/ T3S signal-GFP, RFP] and E. coli [SPI-2 only] cultured in the absence of arabinose were prepared as controls.
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=References=
=References=
# Chen LM, Briones G, Donis RO, Galán JE. 2006. Optimization of the delivery of heterologous proteins by the Salmonella enterica serovar Typhimurium type III secretion system for vaccine development. Infect Immun. Vol.74:5826-5833. [http://www.ncbi.nlm.nih.gov/pubmed/16988261 PubMed]
# Chen LM, Briones G, Donis RO, Galán JE. 2006. Optimization of the delivery of heterologous proteins by the Salmonella enterica serovar Typhimurium type III secretion system for vaccine development. Infect Immun. Vol.74:5826-5833. [http://www.ncbi.nlm.nih.gov/pubmed/16988261 PubMed]

Revision as of 14:18, 21 September 2011

HokkaidoUJapan

Contents

T3SS

Introduction

Fig. 1
Type III secretion apparatus[2].

   Type III Secretion System (T3SS) is a system of pathogenic gram-negative bacterium such as Salmonella, Yersinia and EPEC(entero pathogenic E. coli). Using this system bacteria can inject whole protein molecules through a syringe like organelle named Type 3 Secretion Apparatus (Fig. 1). The target of this system is a eukaryotic cell. Naturally it is used to inject Virulence effector proteins.

Structure of Type III secretion apparatus

   Type III secretion apparatus have a syringe like structure. It can be visible under electron microscope [2]. Its length is about 80 nm and the diameter of its needle channel is about 2 nm [3]. The length is about 1/10 and the diameter is about 1/400 of an E. coli cell’s minor axis. Thus this is the smallest injector in the world (Fig.1 a~c).


How does it function?

Fig.2
Signal peptide recognition and delivery[2].

   When the needle tip attaches to a target cell membrane, a translocator complex is assembled on the target cell membrane. Inside the bacterial cell, an effector protein which has a unique secretion signal domain on its N-terminal is recognized by the specific chaperone, and forms effector-chaperone complex. This complex is recognized by the T3-secretion-associated ATPase located at the base of the needle complex (i). Then, the ATPase stripes the chaperone from the complex and unfolds the effector protein to pass through the channel of the needle complex (ii). Finally, the translocated effector is refolded within the target cell to carry out its function (iii)[2].

Our achievements on iGEM 2010

Fig.3
A model of GFP injection assay

Construction of E. coli base GFP injector

   We made a T3SS test construct on pSB1T3 vector, and transformed it to the E. coli (K-12) carrying BAC vector "pBAC-SPI-2" that encodes a part of Salmonella enterica serovar Typhimurium LT2 genome, which would express secretion apparatus.

Secretion signal

   It was reported that N-terminus 191 amino acid residues of SlrP (one of the natural effector protein of SPI-2 encoded T3SS) function as a T3 secretion signal domain in Salmonella[6].

NLS (Nuclear Localization Signal)

   In addition to the signal peptide, we located triple NLS (Nuclear Localization Signal) repeats between the T3 secretion signal and GFP so that the injected GFP would localize inside of the nucleus in the target cell.

RFP reporter

   The RFP reporter gene constitutively produces RFP as an internal control that cannot be injected into target cells. This RFP would also play a role to distinguish GFP located in target cells from GFP remaining in bacterial cells under the fluorescence microscope.

Arabinose promoter

   This [Secretion signal-NLS-GFP] fusion gene is under control of inducible arabinose promoter, this E. coli produces GFP only in the presence of arabinose.

Methods of Infection Assay

Fig. 4
Procedures of infection assay

   We transferred E. coli [SPI-2/ T3 Signal-GFP, RFP] overnight LB culture to the neutral pH Mg2+minimal medium (MgM pH=7.2) and cultured for 4 hrs with arabinose to accumulate sufficient amount of GFP fusion protein (i). Then the bacteria were transferred to acidic pH Mg2+ minimal medium (MgM pH=5.0) and cultured for 4 hrs with arabinose to assemble T3 secretion apparatus[7] (ii). After that, bacteria were washed three times to remove contaminants that may detrimental for eukaryotic cell (iii). Since T3SS encoded in SPI-2 is known to be function inside of the phagosome of the target cell[8], the bacteria were exposed to the cells (RK13) under acidic pH condition (pH=5.0), which is considered to be similar to the environment inside of the phagosome.


Fig. 5
Injection of effector proteins

   Under the acidic pH condition after the neutral pH, T3 apparatus should be assembled (i) however, only the translocator proteins are secreted through T3SS and effector proteins are not, because the regulatory complex blocks the effectors at the base of the needle (ii). However once the translocator complex assembled a pore on the Target cell membrane the T3SS can sense the neutral pH condition of the cytosol (iii) and this pH elevation removes the regulatory complex from the base of the needle (iv) to start secretion of effectors. After exposure the cells were incubated at 37C in 5.0% CO2. At the same time E.coli [SPI-2/ T3S signal-GFP, RFP] and E. coli [SPI-2 only] cultured in the absence of arabinose were prepared as controls.

References

  1. Chen LM, Briones G, Donis RO, Galán JE. 2006. Optimization of the delivery of heterologous proteins by the Salmonella enterica serovar Typhimurium type III secretion system for vaccine development. Infect Immun. Vol.74:5826-5833. [http://www.ncbi.nlm.nih.gov/pubmed/16988261 PubMed]
  2. Galán JE, Wolf-Watz H. 2006. Protein delivery into eukaryotic cells by type III secretion machines. Nature. Vol.444:567-573. Review. [http://www.ncbi.nlm.nih.gov/pubmed/17136086 PubMed]
  3. Ghosh P. 2004. Process of protein transport by the type III secretion system. Microbiol Mol Biol Rev. Vol.68:771-795. Review.[http://www.ncbi.nlm.nih.gov/pubmed/15590783 PubMed]
  4. Hansen-Wester I, Chakravortty D, Hensel M. 2004. Functional transfer of Salmonella pathogenicity island 2 to Salmonella bongori and Escherichia coli. Infect Immun. Vol.72:2879-2888. [http://www.ncbi.nlm.nih.gov/pubmed/15102800 PubMed]
  5. Jacobi CA, Roggenkamp A, Rakin A, Zumbihl R, Leitritz L, Heesemann J. 1998. In vitro and in vivo expression studies of yopE from Yersinia enterocolitica using the gfp reporter gene. Mol Microbiol. Vol.30:865-882. [http://www.ncbi.nlm.nih.gov/pubmed/10094634 PubMed]
  6. Miao EA, Miller SI. 2000. A conserved amino acid sequence directing intracellular type III secretion by Salmonella typhimurium. Proc Natl Acad Sci U S A. Vol.97:7539-7544. [http://www.ncbi.nlm.nih.gov/pubmed/10861017 PubMed]
  7. Rappl C, Deiwick J, Hensel M. 2003. Acidic pH is required for the functional assembly of the type III secretion system encoded by Salmonella pathogenicity island 2. FEMS Microbiol Lett. Vol.226:363-372. [http://www.ncbi.nlm.nih.gov/pubmed/14553934 PubMed]
  8. Waterman SR, Holden DW. 2003. Functions and effectors of the Salmonella pathogenicity island 2 type III secretion system. Cell Microbiol. Vol.5:501-511. Review. [http://www.ncbi.nlm.nih.gov/pubmed/12864810 PubMed]
  9. Wilson JW, Coleman C, Nickerson CA. 2007. Cloning and transfer of the Salmonella pathogenicity island 2 type III secretion system for studies of a range of gram-negative genera. Appl Environ Microbiol. Vol.73:5911-5918. [http://www.ncbi.nlm.nih.gov/pubmed/17675443 PubMed]
  10. Yu XJ, McGourty K, Liu M, Unsworth KE, Holden DW. 2010. pH sensing by intracellular Salmonella induces effector translocation. Science. Vol.328:1040-1043. [http://www.ncbi.nlm.nih.gov/pubmed/20395475 PubMed]
  11. Yu XJ, Liu M, Holden DW. 2004. SsaM and SpiC interact and regulate secretion of Salmonella pathogenicity island 2 type III secretion system effectors and translocators. Mol Microbiol. Vol.54:604-619. [http://www.ncbi.nlm.nih.gov/pubmed/15491354 PubMed]



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