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Team:BU Wellesley Software/Notebook/JanooNotebook
From 2011.igem.org
(Difference between revisions)
| Line 7: | Line 7: | ||
*figure out how to seamlessly integrate Python script-compiling within fluid GUI | *figure out how to seamlessly integrate Python script-compiling within fluid GUI | ||
*design aforementioned fluid GUI | *design aforementioned fluid GUI | ||
| + | |||
| + | ==Backburner== | ||
| + | *Protocol/Assembly Manager | ||
| + | **Ideally, we should have a protocol graph that would be a generic form of managing an arbitrary combination of protocols. | ||
| + | **The protocol graph should contain vertices, which are either operands or protocols/operations. | ||
| + | **The graph should also connect operands to protocols. | ||
| + | **Given access to a library of protocol specifications, one should be able to give an expression or an explicit protocol graph for parsing purposes. | ||
| + | **One should be able to use PuppetShow (see powerpoint) to create an implicit protocol graph. | ||
| + | **One should be able to reconfigure protocol graphs for optimization, etc. | ||
| + | **Questions | ||
| + | ***How do we want to construct this graph? | ||
| + | ***Does the user input an expression? | ||
| + | ***Should we have an interactive GUI to help user create custom protocol graphs? | ||
Revision as of 16:52, 6 June 2011
Life = 42
To-Do List
- read through Puppeteer/PuppetShow powerpoint
- read through Puppeteer/related abstract
- peruse GroovyScripter code/structure
- figure out how to seamlessly integrate Python script-compiling within fluid GUI
- design aforementioned fluid GUI
Backburner
- Protocol/Assembly Manager
- Ideally, we should have a protocol graph that would be a generic form of managing an arbitrary combination of protocols.
- The protocol graph should contain vertices, which are either operands or protocols/operations.
- The graph should also connect operands to protocols.
- Given access to a library of protocol specifications, one should be able to give an expression or an explicit protocol graph for parsing purposes.
- One should be able to use PuppetShow (see powerpoint) to create an implicit protocol graph.
- One should be able to reconfigure protocol graphs for optimization, etc.
- Questions
- How do we want to construct this graph?
- Does the user input an expression?
- Should we have an interactive GUI to help user create custom protocol graphs?
