Team:USTC-Software/navi

From 2011.igem.org

(Difference between revisions)
(Created page with "__NOTOC__ {{:Team:USTC-Software/temp}} <html xmlns="http://www.w3.org/1999/xhtml"> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <title>Team:USTC-...")
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/*end of navigation*/
/*end of navigation*/
 +
 +
/* search */
 +
#header #search_box {
 +
width: 333px;
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height: 53px;
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bottom: 54px;
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right: 16px;
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background: url(https://static.igem.org/mediawiki/2011/1/15/USTC_Software_search.png)
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}
 +
 +
#search_box form {
 +
width: 280px;
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height: 27px;
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margin: 0;
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padding: 25px 0 0 0;
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        z-index:-1;
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}
 +
 +
#searchfield {
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height: 17px;
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width: 270px;
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padding: 4px 5px 6px 5px;
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color: #fff;
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font-size: 12px;
 +
font-variant: normal;
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line-height: normal;
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background: none;
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border: none;
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        z-index:-1;
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}
 +
 +
/* end of search */
 +
 +
/*clock_box*/
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#header #clock_box {
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position: absolute;
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width: 320px;
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height: 21px;
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bottom: 85px;
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right: 26px;
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}
 +
 +
#clock_box form {
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width: 280px;
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height: 27px;
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margin: 0;
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padding: 25px 0 0 0;
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}
 +
 +
/* end of clock_box*/
 +
 +
/* content_wrapper */
 +
 +
#content {
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background-color:#a0c73f;
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width:auto;
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}
 +
 +
#content_wrapper {
 +
width: 920px;
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margin: 0 auto;
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padding: 30px 40px;
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background: url(https://static.igem.org/mediawiki/2011/b/bc/USTC_Software_content.jpg) repeat-y;
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}
 +
 +
#content_wrapper h1 {
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color: #3a5909;
 +
font-size:24px;
 +
padding: 0 0 60px 20px;
 +
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
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}
 +
 +
#content_wrapper p {
 +
font-family: Verdana, Arial;
 +
font-size:14px;
 +
}
 +
 +
#content_wrapper_bottom {
 +
width: 1000px;
 +
height: 15px;
 +
margin: 0 auto;
 +
background: url(https://static.igem.org/mediawiki/2011/a/a5/USTC_Software_content_bottom.jpg) no-repeat;
 +
        background-color: #a0c73f;
 +
}
 +
 +
/* end of content_wrapper */
 +
 +
/* footer */
 +
 +
#mfooter {
 +
width: 980px;
 +
margin: 0 auto;
 +
padding: 30px 10px;
 +
text-align: center;
 +
color: #333333;
 +
        background-color: #a0c73f;
 +
}
 +
 +
#mfooter a {
 +
color:#000;
 +
}
 +
 +
#mfooter .mfooter_menu {
 +
margin: 0 0 10px 0;
 +
padding: 0px;
 +
list-style: none;
 +
}
 +
 +
.mfooter_menu li {
 +
margin: 0px;
 +
padding: 0 20px;
 +
display: inline;
 +
border-right: 1px solid #000000;
 +
}
 +
 +
.mfooter_menu .last_menu {
 +
border: none;
 +
}
 +
 +
#footer-box { background-color: transparent; border:none;} /*This is important!*/
 +
 +
#totop_box {
 +
position:fixed;
 +
width: 77px;
 +
height: 75px;
 +
bottom: 21px;
 +
right: 15px;
 +
}
 +
 +
#totop_box form {
 +
width: 280px;
 +
height: 27px;
 +
margin: 0;
 +
padding: 25px 0 0 0;
 +
}
 +
 +
#to_org_box {
 +
position:fixed;
 +
width: 77px;
 +
height: 75px;
 +
bottom: 21px;
 +
right: 105px;
 +
}
 +
 +
#to_org_box form {
 +
width: 280px;
 +
height: 27px;
 +
margin: 0;
 +
padding: 25px 0 0 0;
 +
}
 +
/* end of footer*/
 +
 +
/* content */
 +
 +
.content_section {
 +
clear: both;
 +
width: 100%;
 +
}
 +
 +
.intro_box {
 +
float: left;
 +
width: 282px;
 +
padding-bottom: 10px;
 +
border-bottom: 1px dotted #666;
 +
margin-bottom: 20px;
 +
}
 +
 +
.fl_image {
 +
float: left;
 +
margin: 3px 15px 5px 0;
 +
}
 +
 +
#content .product_box p {
 +
padding: 0;
 +
margin: 0 0 5px 0;
 +
}
 +
 +
#content .product_box a {
 +
color: #000000;
 +
font-weight: bold;
 +
}
 +
 +
#content .em_text {
 +
color: #537c11;
 +
}
 +
 +
.inro {
 +
color: #C30;
 +
font-size: 14px;
 +
font-weight: bold;
 +
}
 +
 +
.intro_box h3 {
 +
background: #63a103;
 +
padding: 3px 10px;
 +
margin: 0 0 10px 0;
 +
color: #ffffff;
 +
font-size: 12px;
 +
}
 +
 +
.intro_box img {
 +
width: 272px;
 +
height: 168px;
 +
border: 5px solid #e6e0ce;
 +
        margin-bottom: 10px;
 +
}
 +
 +
.button_01 a {
 +
display: block;
 +
width: 102px;
 +
height: 23px;
 +
padding: 7px 0 0 0;
 +
background: url(./images/USTC_Software_button.png)  no-repeat;
 +
color: #333;
 +
font-size: 12px;
 +
font-weight: bold;
 +
text-align: center;
 +
text-decoration: none;
 +
}
 +
 +
.button_01 a:hover {
 +
color: #fff;
 +
        background:url(./images/USTC_Software_button_hover.png) no-repeat;
 +
}
 +
 +
.button_01 a {
 +
display: block;
 +
width: 102px;
 +
height: 23px;
 +
padding: 7px 0 0 0;
 +
background: url(https://static.igem.org/mediawiki/2011/0/0e/USTC_Software_button.png)  no-repeat;
 +
color: #333;
 +
font-size: 12px;
 +
font-weight: bold;
 +
text-align: center;
 +
text-decoration: none;
 +
}
 +
 +
.button_01 a:hover {
 +
color: #fff;
 +
        background:url(https://static.igem.org/mediawiki/2011/c/c1/USTC_Software_button_hover.png) no-repeat;
 +
}
 +
 +
.cleaner { clear: both; width: 100%; height: 0px; font-size: 0px;  } /**/  /*This is important!*/
 +
.cleaner_h30 { clear: both; width:100%; height: 30px; }/**/
 +
.cleaner_h40 { clear: both; width:100%; height: 40px; }/**/
 +
.margin_r10 { margin-right: 24px; }/**/
 +
 +
.float_l { float: left; }/**/
 +
.float_r { float:  right; }/**/
 +
</style>
 +
 +
<!-- Javascript-->
 +
 +
    <!--jquery-1.2.3.min.js-->
 +
<script type='text/javascript'>
 +
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      selector=[];}}else
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      return new jQuery(context).find(selector);}else if(jQuery.isFunction(selector))return new jQuery(document)[jQuery.fn.ready?"ready":"load"](selector);return this.setArray(selector.constructor==Array&&selector||(selector.jquery||selector.length&&selector!=window&&!selector.nodeType&&selector[0]!=undefined&&selector[0].nodeType)&&jQuery.makeArray(selector)||[selector]);},jquery:"1.2.3",size:function(){return this.length;},length:0,get:function(num){return num==undefined?jQuery.makeArray(this):this[num];},pushStack:function(elems){var ret=jQuery(elems);ret.prevObject=this;return ret;},setArray:function(elems){this.length=0;Array.prototype.push.apply(this,elems);return this;},each:function(callback,args){return jQuery.each(this,callback,args);},index:function(elem){var ret=-1;this.each(function(i){if(this==elem)ret=i;});return ret;},attr:function(name,value,type){var options=name;if(name.constructor==String)if(value==undefined)return this.length&&jQuery[type||"attr"](this[0],name)||undefined;else{options={};options[name]=value;}return this.each(function(i){for(name in options)jQuery.attr(type?this.style:this,name,jQuery.prop(this,options[name],type,i,name));});},css:function(key,value){if((key=='width'||key=='height')&&parseFloat(value)<0)value=undefined;return this.attr(key,value,"curCSS");},text:function(text){if(typeof text!="object"&&text!=null)return this.empty().append((this[0]&&this[0].ownerDocument||document).createTextNode(text));var ret="";jQuery.each(text||this,function(){jQuery.each(this.childNodes,function(){if(this.nodeType!=8)ret+=this.nodeType!=1?this.nodeValue:jQuery.fn.text([this]);});});return ret;},wrapAll:function(html){if(this[0])jQuery(html,this[0].ownerDocument).clone().insertBefore(this[0]).map(function(){var elem=this;while(elem.firstChild)elem=elem.firstChild;return elem;}).append(this);return this;},wrapInner:function(html){return this.each(function(){jQuery(this).contents().wrapAll(html);});},wrap:function(html){return this.each(function(){jQuery(this).wrapAll(html);});},append:function(){return this.domManip(arguments,true,false,function(elem){if(this.nodeType==1)this.appendChild(elem);});},prepend:function(){return this.domManip(arguments,true,true,function(elem){if(this.nodeType==1)this.insertBefore(elem,this.firstChild);});},before:function(){return this.domManip(arguments,false,false,function(elem){this.parentNode.insertBefore(elem,this);});},after:function(){return this.domManip(arguments,false,true,function(elem){this.parentNode.insertBefore(elem,this.nextSibling);});},end:function(){return this.prevObject||jQuery([]);},find:function(selector){var elems=jQuery.map(this,function(elem){return jQuery.find(selector,elem);});return this.pushStack(/[^+>] [^+>]/.test(selector)||selector.indexOf("..")>-1?jQuery.unique(elems):elems);},clone:function(events){var ret=this.map(function(){if(jQuery.browser.msie&&!jQuery.isXMLDoc(this)){var clone=this.cloneNode(true),container=document.createElement("div");container.appendChild(clone);return jQuery.clean([container.innerHTML])[0];}else
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originalEvent=event;event=jQuery.extend({},originalEvent);event.preventDefault=function(){if(originalEvent.preventDefault)originalEvent.preventDefault();originalEvent.returnValue=false;};event.stopPropagation=function(){if(originalEvent.stopPropagation)originalEvent.stopPropagation();originalEvent.cancelBubble=true;};if(!event.target)event.target=event.srcElement||document;if(event.target.nodeType==3)event.target=originalEvent.target.parentNode;if(!event.relatedTarget&&event.fromElement)event.relatedTarget=event.fromElement==event.target?event.toElement:event.fromElement;if(event.pageX==null&&event.clientX!=null){var doc=document.documentElement,body=document.body;event.pageX=event.clientX+(doc&&doc.scrollLeft||body&&body.scrollLeft||0)-(doc.clientLeft||0);event.pageY=event.clientY+(doc&&doc.scrollTop||body&&body.scrollTop||0)-(doc.clientTop||0);}if(!event.which&&((event.charCode||event.charCode===0)?event.charCode:event.keyCode))event.which=event.charCode||event.keyCode;if(!event.metaKey&&event.ctrlKey)event.metaKey=event.ctrlKey;if(!event.which&&event.button)event.which=(event.button&1?1:(event.button&2?3:(event.button&4?2:0)));return event;},special:{ready:{setup:function(){bindReady();return;},teardown:function(){return;}},mouseenter:{setup:function(){if(jQuery.browser.msie)return false;jQuery(this).bind("mouseover",jQuery.event.special.mouseenter.handler);return true;},teardown:function(){if(jQuery.browser.msie)return false;jQuery(this).unbind("mouseover",jQuery.event.special.mouseenter.handler);return true;},handler:function(event){if(withinElement(event,this))return true;arguments[0].type="mouseenter";return jQuery.event.handle.apply(this,arguments);}},mouseleave:{setup:function(){if(jQuery.browser.msie)return false;jQuery(this).bind("mouseout",jQuery.event.special.mouseleave.handler);return true;},teardown:function(){if(jQuery.browser.msie)return false;jQuery(this).unbind("mouseout",jQuery.event.special.mouseleave.handler);return true;},handler:function(event){if(withinElement(event,this))return true;arguments[0].type="mouseleave";return jQuery.event.handle.apply(this,arguments);}}}};jQuery.fn.extend({bind:function(type,data,fn){return type=="unload"?this.one(type,data,fn):this.each(function(){jQuery.event.add(this,type,fn||data,fn&&data);});},one:function(type,data,fn){return this.each(function(){jQuery.event.add(this,type,function(event){jQuery(this).unbind(event);return(fn||data).apply(this,arguments);},fn&&data);});},unbind:function(type,fn){return this.each(function(){jQuery.event.remove(this,type,fn);});},trigger:function(type,data,fn){return this.each(function(){jQuery.event.trigger(type,data,this,true,fn);});},triggerHandler:function(type,data,fn){if(this[0])return jQuery.event.trigger(type,data,this[0],false,fn);return undefined;},toggle:function(){var args=arguments;return this.click(function(event){this.lastToggle=0==this.lastToggle?1:0;event.preventDefault();return args[this.lastToggle].apply(this,arguments)||false;});},hover:function(fnOver,fnOut){return this.bind('mouseenter',fnOver).bind('mouseleave',fnOut);},ready:function(fn){bindReady();if(jQuery.isReady)fn.call(document,jQuery);else
 +
      jQuery.readyList.push(function(){return fn.call(this,jQuery);});return this;}});jQuery.extend({isReady:false,readyList:[],ready:function(){if(!jQuery.isReady){jQuery.isReady=true;if(jQuery.readyList){jQuery.each(jQuery.readyList,function(){this.apply(document);});jQuery.readyList=null;}jQuery(document).triggerHandler("ready");}}});var readyBound=false;function bindReady(){if(readyBound)return;readyBound=true;if(document.addEventListener&&!jQuery.browser.opera)document.addEventListener("DOcontentLoaded",jQuery.ready,false);if(jQuery.browser.msie&&window==top)(function(){if(jQuery.isReady)return;try{document.documentElement.doScroll("left");}catch(error){setTimeout(arguments.callee,0);return;}jQuery.ready();})();if(jQuery.browser.opera)document.addEventListener("DOcontentLoaded",function(){if(jQuery.isReady)return;for(var i=0;i<document.styleSheets.length;i++)if(document.styleSheets[i].disabled){setTimeout(arguments.callee,0);return;}jQuery.ready();},false);if(jQuery.browser.safari){var numStyles;(function(){if(jQuery.isReady)return;if(document.readyState!="loaded"&&document.readyState!="complete"){setTimeout(arguments.callee,0);return;}if(numStyles===undefined)numStyles=jQuery("style, link[rel=stylesheet]").length;if(document.styleSheets.length!=numStyles){setTimeout(arguments.callee,0);return;}jQuery.ready();})();}jQuery.event.add(window,"load",jQuery.ready);}jQuery.each(("blur,focus,load,resize,scroll,unload,click,dblclick,"+"mousedown,mouseup,mousemove,mouseover,mouseout,change,select,"+"submit,keydown,keypress,keyup,error").split(","),function(i,name){jQuery.fn[name]=function(fn){return fn?this.bind(name,fn):this.trigger(name);};});var withinElement=function(event,elem){var parent=event.relatedTarget;while(parent&&parent!=elem)try{parent=parent.parentNode;}catch(error){parent=elem;}return parent==elem;};jQuery(window).bind("unload",function(){jQuery("*").add(document).unbind();});jQuery.fn.extend({load:function(url,params,callback){if(jQuery.isFunction(url))return this.bind("load",url);var off=url.indexOf(" ");if(off>=0){var selector=url.slice(off,url.length);url=url.slice(0,off);}callback=callback||function(){};var type="GET";if(params)if(jQuery.isFunction(params)){callback=params;params=null;}else{params=jQuery.param(params);type="POST";}var self=this;jQuery.ajax({url:url,type:type,dataType:"html",data:params,complete:function(res,status){if(status=="success"||status=="notmodified")self.html(selector?jQuery("<div/>").append(res.responseText.replace(/<script(.|\s)*?\/script>/g,"")).find(selector):res.responseText);self.each(callback,[res.responseText,status,res]);}});return this;},serialize:function(){return jQuery.param(this.serializeArray());},serializeArray:function(){return this.map(function(){return jQuery.nodeName(this,"form")?jQuery.makeArray(this.elements):this;}).filter(function(){return this.name&&!this.disabled&&(this.checked||/select|textarea/i.test(this.nodeName)||/text|hidden|password/i.test(this.type));}).map(function(i,elem){var val=jQuery(this).val();return val==null?null:val.constructor==Array?jQuery.map(val,function(val,i){return{name:elem.name,value:val};}):{name:elem.name,value:val};}).get();}});jQuery.each("ajaxStart,ajaxStop,ajaxComplete,ajaxError,ajaxSuccess,ajaxSend".split(","),function(i,o){jQuery.fn[o]=function(f){return this.bind(o,f);};});var jsc=(new Date).getTime();jQuery.extend({get:function(url,data,callback,type){if(jQuery.isFunction(data)){callback=data;data=null;}return jQuery.ajax({type:"GET",url:url,data:data,success:callback,dataType:type});},getScript:function(url,callback){return jQuery.get(url,null,callback,"script");},getJSON:function(url,data,callback){return jQuery.get(url,data,callback,"json");},post:function(url,data,callback,type){if(jQuery.isFunction(data)){callback=data;data={};}return jQuery.ajax({type:"POST",url:url,data:data,success:callback,dataType:type});},ajaxSetup:function(settings){jQuery.extend(jQuery.ajaxSettings,settings);},ajaxSettings:{global:true,type:"GET",timeout:0,contentType:"application/x-www-form-urlencoded",processData:true,async:true,data:null,username:null,password:null,accepts:{xml:"application/xml, text/xml",html:"text/html",script:"text/javascript, application/javascript",json:"application/json, text/javascript",text:"text/plain",_default:"*/*"}},lastModified:{},ajax:function(s){var jsonp,jsre=/=\?(&|$)/g,status,data;s=jQuery.extend(true,s,jQuery.extend(true,{},jQuery.ajaxSettings,s));if(s.data&&s.processData&&typeof s.data!="string")s.data=jQuery.param(s.data);if(s.dataType=="jsonp"){if(s.type.toLowerCase()=="get"){if(!s.url.match(jsre))s.url+=(s.url.match(/\?/)?"&":"?")+(s.jsonp||"callback")+"=?";}else if(!s.data||!s.data.match(jsre))s.data=(s.data?s.data+"&":"")+(s.jsonp||"callback")+"=?";s.dataType="json";}if(s.dataType=="json"&&(s.data&&s.data.match(jsre)||s.url.match(jsre))){jsonp="jsonp"+jsc++;if(s.data)s.data=(s.data+"").replace(jsre,"="+jsonp+"$1");s.url=s.url.replace(jsre,"="+jsonp+"$1");s.dataType="script";window[jsonp]=function(tmp){data=tmp;success();complete();window[jsonp]=undefined;try{delete window[jsonp];}catch(e){}if(head)head.removeChild(script);};}if(s.dataType=="script"&&s.cache==null)s.cache=false;if(s.cache===false&&s.type.toLowerCase()=="get"){var ts=(new Date()).getTime();var ret=s.url.replace(/(\?|&)_=.*?(&|$)/,"$1_="+ts+"$2");s.url=ret+((ret==s.url)?(s.url.match(/\?/)?"&":"?")+"_="+ts:"");}if(s.data&&s.type.toLowerCase()=="get"){s.url+=(s.url.match(/\?/)?"&":"?")+s.data;s.data=null;}if(s.global&&!jQuery.active++)jQuery.event.trigger("ajaxStart");if((!s.url.indexOf("http")||!s.url.indexOf("//"))&&s.dataType=="script"&&s.type.toLowerCase()=="get"){var head=document.getElementsByTagName("head")[0];var script=document.createElement("script");script.src=s.url;if(s.scriptCharset)script.charset=s.scriptCharset;if(!jsonp){var done=false;script.onload=script.onreadystatechange=function(){if(!done&&(!this.readyState||this.readyState=="loaded"||this.readyState=="complete")){done=true;success();complete();head.removeChild(script);}};}head.appendChild(script);return undefined;}var requestDone=false;var xml=window.ActiveXObject?new ActiveXObject("Microsoft.XMLHTTP"):new XMLHttpRequest();xml.open(s.type,s.url,s.async,s.username,s.password);try{if(s.data)xml.setRequestHeader("Content-Type",s.contentType);if(s.ifModified)xml.setRequestHeader("If-Modified-Since",jQuery.lastModified[s.url]||"Thu, 01 Jan 1970 00:00:00 GMT");xml.setRequestHeader("X-Requested-With","XMLHttpRequest");xml.setRequestHeader("Accept",s.dataType&&s.accepts[s.dataType]?s.accepts[s.dataType]+", */*":s.accepts._default);}catch(e){}if(s.beforeSend)s.beforeSend(xml);if(s.global)jQuery.event.trigger("ajaxSend",[xml,s]);var onreadystatechange=function(isTimeout){if(!requestDone&&xml&&(xml.readyState==4||isTimeout=="timeout")){requestDone=true;if(ival){clearInterval(ival);ival=null;}status=isTimeout=="timeout"&&"timeout"||!jQuery.httpSuccess(xml)&&"error"||s.ifModified&&jQuery.httpNotModified(xml,s.url)&&"notmodified"||"success";if(status=="success"){try{data=jQuery.httpData(xml,s.dataType);}catch(e){status="parsererror";}}if(status=="success"){var modRes;try{modRes=xml.getResponseHeader("Last-Modified");}catch(e){}if(s.ifModified&&modRes)jQuery.lastModified[s.url]=modRes;if(!jsonp)success();}else
 +
      jQuery.handleError(s,xml,status);complete();if(s.async)xml=null;}};if(s.async){var ival=setInterval(onreadystatechange,13);if(s.timeout>0)setTimeout(function(){if(xml){xml.abort();if(!requestDone)onreadystatechange("timeout");}},s.timeout);}try{xml.send(s.data);}catch(e){jQuery.handleError(s,xml,null,e);}if(!s.async)onreadystatechange();function success(){if(s.success)s.success(data,status);if(s.global)jQuery.event.trigger("ajaxSuccess",[xml,s]);}function complete(){if(s.complete)s.complete(xml,status);if(s.global)jQuery.event.trigger("ajaxComplete",[xml,s]);if(s.global&&!--jQuery.active)jQuery.event.trigger("ajaxStop");}return xml;},handleError:function(s,xml,status,e){if(s.error)s.error(xml,status,e);if(s.global)jQuery.event.trigger("ajaxError",[xml,s,e]);},active:0,httpSuccess:function(r){try{return!r.status&&location.protocol=="file:"||(r.status>=200&&r.status<300)||r.status==304||r.status==1223||jQuery.browser.safari&&r.status==undefined;}catch(e){}return false;},httpNotModified:function(xml,url){try{var xmlRes=xml.getResponseHeader("Last-Modified");return xml.status==304||xmlRes==jQuery.lastModified[url]||jQuery.browser.safari&&xml.status==undefined;}catch(e){}return false;},httpData:function(r,type){var ct=r.getResponseHeader("content-type");var xml=type=="xml"||!type&&ct&&ct.indexOf("xml")>=0;var data=xml?r.responseXML:r.responseText;if(xml&&data.documentElement.tagName=="parsererror")throw"parsererror";if(type=="script")jQuery.globalEval(data);if(type=="json")data=eval("("+data+")");return data;},param:function(a){var s=[];if(a.constructor==Array||a.jquery)jQuery.each(a,function(){s.push(encodeURIComponent(this.name)+"="+encodeURIComponent(this.value));});else
 +
      for(var j in a)if(a[j]&&a[j].constructor==Array)jQuery.each(a[j],function(){s.push(encodeURIComponent(j)+"="+encodeURIComponent(this));});else
 +
      s.push(encodeURIComponent(j)+"="+encodeURIComponent(a[j]));return s.join("&").replace(/%20/g,"+");}});jQuery.fn.extend({show:function(speed,callback){return speed?this.animate({height:"show",width:"show",opacity:"show"},speed,callback):this.filter(":hidden").each(function(){this.style.display=this.oldblock||"";if(jQuery.css(this,"display")=="none"){var elem=jQuery("<"+this.tagName+" />").appendTo("body");this.style.display=elem.css("display");if(this.style.display=="none")this.style.display="block";elem.remove();}}).end();},hide:function(speed,callback){return speed?this.animate({height:"hide",width:"hide",opacity:"hide"},speed,callback):this.filter(":visible").each(function(){this.oldblock=this.oldblock||jQuery.css(this,"display");this.style.display="none";}).end();},_toggle:jQuery.fn.toggle,toggle:function(fn,fn2){return jQuery.isFunction(fn)&&jQuery.isFunction(fn2)?this._toggle(fn,fn2):fn?this.animate({height:"toggle",width:"toggle",opacity:"toggle"},fn,fn2):this.each(function(){jQuery(this)[jQuery(this).is(":hidden")?"show":"hide"]();});},slideDown:function(speed,callback){return this.animate({height:"show"},speed,callback);},slideUp:function(speed,callback){return this.animate({height:"hide"},speed,callback);},slideToggle:function(speed,callback){return this.animate({height:"toggle"},speed,callback);},fadeIn:function(speed,callback){return this.animate({opacity:"show"},speed,callback);},fadeOut:function(speed,callback){return this.animate({opacity:"hide"},speed,callback);},fadeTo:function(speed,to,callback){return this.animate({opacity:to},speed,callback);},animate:function(prop,speed,easing,callback){var optall=jQuery.speed(speed,easing,callback);return this[optall.queue===false?"each":"queue"](function(){if(this.nodeType!=1)return false;var opt=jQuery.extend({},optall);var hidden=jQuery(this).is(":hidden"),self=this;for(var p in prop){if(prop[p]=="hide"&&hidden||prop[p]=="show"&&!hidden)return jQuery.isFunction(opt.complete)&&opt.complete.apply(this);if(p=="height"||p=="width"){opt.display=jQuery.css(this,"display");opt.overflow=this.style.overflow;}}if(opt.overflow!=null)this.style.overflow="hidden";opt.curAnim=jQuery.extend({},prop);jQuery.each(prop,function(name,val){var e=new jQuery.fx(self,opt,name);if(/toggle|show|hide/.test(val))e[val=="toggle"?hidden?"show":"hide":val](prop);else{var parts=val.toString().match(/^([+-]=)?([\d+-.]+)(.*)$/),start=e.cur(true)||0;if(parts){var end=parseFloat(parts[2]),unit=parts[3]||"px";if(unit!="px"){self.style[name]=(end||1)+unit;start=((end||1)/e.cur(true))*start;self.style[name]=start+unit;}if(parts[1])end=((parts[1]=="-="?-1:1)*end)+start;e.custom(start,end,unit);}else
 +
      e.custom(start,val,"");}});return true;});},queue:function(type,fn){if(jQuery.isFunction(type)||(type&&type.constructor==Array)){fn=type;type="fx";}if(!type||(typeof type=="string"&&!fn))return queue(this[0],type);return this.each(function(){if(fn.constructor==Array)queue(this,type,fn);else{queue(this,type).push(fn);if(queue(this,type).length==1)fn.apply(this);}});},stop:function(clearQueue,gotoEnd){var timers=jQuery.timers;if(clearQueue)this.queue([]);this.each(function(){for(var i=timers.length-1;i>=0;i--)if(timers[i].elem==this){if(gotoEnd)timers[i](true);timers.splice(i,1);}});if(!gotoEnd)this.dequeue();return this;}});var queue=function(elem,type,array){if(!elem)return undefined;type=type||"fx";var q=jQuery.data(elem,type+"queue");if(!q||array)q=jQuery.data(elem,type+"queue",array?jQuery.makeArray(array):[]);return q;};jQuery.fn.dequeue=function(type){type=type||"fx";return this.each(function(){var q=queue(this,type);q.shift();if(q.length)q[0].apply(this);});};jQuery.extend({speed:function(speed,easing,fn){var opt=speed&&speed.constructor==Object?speed:{complete:fn||!fn&&easing||jQuery.isFunction(speed)&&speed,duration:speed,easing:fn&&easing||easing&&easing.constructor!=Function&&easing};opt.duration=(opt.duration&&opt.duration.constructor==Number?opt.duration:{slow:600,fast:200}[opt.duration])||400;opt.old=opt.complete;opt.complete=function(){if(opt.queue!==false)jQuery(this).dequeue();if(jQuery.isFunction(opt.old))opt.old.apply(this);};return opt;},easing:{linear:function(p,n,firstNum,diff){return firstNum+diff*p;},swing:function(p,n,firstNum,diff){return((-Math.cos(p*Math.PI)/2)+0.5)*diff+firstNum;}},timers:[],timerId:null,fx:function(elem,options,prop){this.options=options;this.elem=elem;this.prop=prop;if(!options.orig)options.orig={};}});jQuery.fx.prototype={update:function(){if(this.options.step)this.options.step.apply(this.elem,[this.now,this]);(jQuery.fx.step[this.prop]||jQuery.fx.step._default)(this);if(this.prop=="height"||this.prop=="width")this.elem.style.display="block";},cur:function(force){if(this.elem[this.prop]!=null&&this.elem.style[this.prop]==null)return this.elem[this.prop];var r=parseFloat(jQuery.css(this.elem,this.prop,force));return r&&r>-10000?r:parseFloat(jQuery.curCSS(this.elem,this.prop))||0;},custom:function(from,to,unit){this.startTime=(new Date()).getTime();this.start=from;this.end=to;this.unit=unit||this.unit||"px";this.now=this.start;this.pos=this.state=0;this.update();var self=this;function t(gotoEnd){return self.step(gotoEnd);}t.elem=this.elem;jQuery.timers.push(t);if(jQuery.timerId==null){jQuery.timerId=setInterval(function(){var timers=jQuery.timers;for(var i=0;i<timers.length;i++)if(!timers[i]())timers.splice(i--,1);if(!timers.length){clearInterval(jQuery.timerId);jQuery.timerId=null;}},13);}},show:function(){this.options.orig[this.prop]=jQuery.attr(this.elem.style,this.prop);this.options.show=true;this.custom(0,this.cur());if(this.prop=="width"||this.prop=="height")this.elem.style[this.prop]="1px";jQuery(this.elem).show();},hide:function(){this.options.orig[this.prop]=jQuery.attr(this.elem.style,this.prop);this.options.hide=true;this.custom(this.cur(),0);},step:function(gotoEnd){var t=(new Date()).getTime();if(gotoEnd||t>this.options.duration+this.startTime){this.now=this.end;this.pos=this.state=1;this.update();this.options.curAnim[this.prop]=true;var done=true;for(var i in this.options.curAnim)if(this.options.curAnim[i]!==true)done=false;if(done){if(this.options.display!=null){this.elem.style.overflow=this.options.overflow;this.elem.style.display=this.options.display;if(jQuery.css(this.elem,"display")=="none")this.elem.style.display="block";}if(this.options.hide)this.elem.style.display="none";if(this.options.hide||this.options.show)for(var p in this.options.curAnim)jQuery.attr(this.elem.style,p,this.options.orig[p]);}if(done&&jQuery.isFunction(this.options.complete))this.options.complete.apply(this.elem);return false;}else{var n=t-this.startTime;this.state=n/this.options.duration;this.pos=jQuery.easing[this.options.easing||(jQuery.easing.swing?"swing":"linear")](this.state,n,0,1,this.options.duration);this.now=this.start+((this.end-this.start)*this.pos);this.update();}return true;}};jQuery.fx.step={scrollLeft:function(fx){fx.elem.scrollLeft=fx.now;},scrollTop:function(fx){fx.elem.scrollTop=fx.now;},opacity:function(fx){jQuery.attr(fx.elem.style,"opacity",fx.now);},_default:function(fx){fx.elem.style[fx.prop]=fx.now+fx.unit;}};jQuery.fn.offset=function(){var left=0,top=0,elem=this[0],results;if(elem)with(jQuery.browser){var parent=elem.parentNode,offsetChild=elem,offsetParent=elem.offsetParent,doc=elem.ownerDocument,safari2=safari&&parseInt(version)<522&&!/adobeair/i.test(userAgent),fixed=jQuery.css(elem,"position")=="fixed";if(elem.getBoundingClientRect){var box=elem.getBoundingClientRect();add(box.left+Math.max(doc.documentElement.scrollLeft,doc.body.scrollLeft),box.top+Math.max(doc.documentElement.scrollTop,doc.body.scrollTop));add(-doc.documentElement.clientLeft,-doc.documentElement.clientTop);}else{add(elem.offsetLeft,elem.offsetTop);while(offsetParent){add(offsetParent.offsetLeft,offsetParent.offsetTop);if(mozilla&&!/^t(able|d|h)$/i.test(offsetParent.tagName)||safari&&!safari2)border(offsetParent);if(!fixed&&jQuery.css(offsetParent,"position")=="fixed")fixed=true;offsetChild=/^body$/i.test(offsetParent.tagName)?offsetChild:offsetParent;offsetParent=offsetParent.offsetParent;}while(parent&&parent.tagName&&!/^body|html$/i.test(parent.tagName)){if(!/^inline|table.*$/i.test(jQuery.css(parent,"display")))add(-parent.scrollLeft,-parent.scrollTop);if(mozilla&&jQuery.css(parent,"overflow")!="visible")border(parent);parent=parent.parentNode;}if((safari2&&(fixed||jQuery.css(offsetChild,"position")=="absolute"))||(mozilla&&jQuery.css(offsetChild,"position")!="absolute"))add(-doc.body.offsetLeft,-doc.body.offsetTop);if(fixed)add(Math.max(doc.documentElement.scrollLeft,doc.body.scrollLeft),Math.max(doc.documentElement.scrollTop,doc.body.scrollTop));}results={top:top,left:left};}function border(elem){add(jQuery.curCSS(elem,"borderLeftWidth",true),jQuery.curCSS(elem,"borderTopWidth",true));}function add(l,t){left+=parseInt(l)||0;top+=parseInt(t)||0;}return results;};})();
 +
      </script>
 +
    <!--end of jquery-1.2.3.min.js-->
 +
 +
    <!--jquery.innerfade.js-->
 +
    <script type="text/javascript">
 +
       
 +
        (function($) {
 +
   
 +
        $.fn.innerfade = function(options) {
 +
            return this.each(function() { 
 +
                $.innerfade(this, options);
 +
            });
 +
        };
 +
   
 +
        $.innerfade = function(container, options) {
 +
            var settings = {
 +
                    'animationtype':    'fade',
 +
                'speed':            'normal',
 +
                'type':            'sequence',
 +
                'timeout':          2000,
 +
                'containerheight':  'auto',
 +
                'runningclass':    'innerfade',
 +
                'children':        null
 +
            };
 +
            if (options)
 +
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            if (settings.type == "sequence") {
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                if ((current + 1) < elements.length) {
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                alert('Innerfade-Type must either be \'sequence\', \'random\' or \'random_start\'');
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            setTimeout((function() {
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                $.innerfade.next(elements, settings, current, last);
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    // **** remove Opacity-Filter in ie ****
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    function removeFilter(element) {
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<script type="text/javascript">
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function(){
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$('#left_content').innerfade({
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containerheight: '150px'
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<script language="javascript" type="text/javascript">
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function  Clock()
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{  var today = new Date();
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document.getElementById("clock").innerHTML  = date; 
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}
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</script>
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</head>
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<body>
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<div id="header_wrapper">
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    <div id="header">
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  <div id="site_title">
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            <h1><img src="https://static.igem.org/mediawiki/2011/b/b8/USTC_Software_iGEM_logo.jpg" alt="iGEM" width="173" height="150" /> </br> </br> USTC-Software </h1>
 +
        </div>
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<!-- navigation -->
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<ul id="nav">
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<li><a class="on" href="https://2011.igem.org/Team:USTC-Software">Home</a></li>
 +
 +
   
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    <li><a href="https://2011.igem.org/Team:USTC-Software/project">Project</a>
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<ul>
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<li><a href="https://2011.igem.org/Team:USTC-Software/documents">Documents Parser</a></li>
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<li><a href="https://2011.igem.org/Team:USTC-Software/models">Models</a></li>
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    <li><a href="#">Views</a>
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                            <ul>
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                                <li><a href="https://2011.igem.org/Team:USTC-Software/aview">Assembly View</a></li>
 +
                                <li><a href="https://2011.igem.org/Team:USTC-Software/bview">Behavior View</a></li>
 +
                                <li><a href="https://2011.igem.org/Team:USTC-Software/nview">Network View</a></li>                     
 +
                            </ul>
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                                <li><a href="https://2011.igem.org/Team:USTC-Software/tech&algo">Technology & Algorithm</a></li>
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                                <li><a href="https://2011.igem.org/Team:USTC-Software/tutorial">Tutorial & Demo</a></li>
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</ul>
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</li>
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                <li><a href="https://2011.igem.org/Team:USTC-Software/notebook">Notebook</a></li>
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<li><a href="https://2011.igem.org/Team:USTC-Software/team">Team</a>
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                          <ul>
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/members">members</a></li>
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/collaboration">collaboration</a></li>
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/attribution">attribution & contributions</a></li>
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/acknowledgements">acknowledgements</a></li>
 +
                          </ul>
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                </li>
 +
 
 +
  <li><a href="https://2011.igem.org/Team:USTC-Software/human practice">Human practice</a>             
 +
  <ul>
 +
    <li><a href="https://2011.igem.org/Team:USTC-Software/safety">safety</a></li>
 +
    <li><a href="https://2011.igem.org/Team:USTC-Software/meetup">meetup</a></li>
 +
  </ul>
 +
</li> 
 +
 +
<li><a class="last" href="https://2011.igem.org/Team:USTC-Software/download">Download</a></li>
 +
           
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</ul>
 +
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 +
           
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  <form action="http://www.google.com.hk/cse" id="cse-search-box" method="get" target="_blank" >
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    <input type="text" value="SEARCH..." name="q" size="10" id="searchfield" title="searchfield" onFocus="clearText(this)" onBlur="clearText(this)" />
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        <script type=text/javascript>
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              document.write('<font  id="clock" color="#000000"> </font>');setInterval('Clock()',1000);</script>
 +
      </div>
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    <div class="cleaner"></div>
 +
    </div> <!-- end of header -->
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</div>
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<!-- end of header_wrapper -->
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<div id="content_wrapper">
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<!-- Content wrap -->
 +
<div>
 +
 +
<div id="left_content">
 +
<div class="slider_item">
 +
<div align="center">  <img src="https://static.igem.org/mediawiki/2011/3/31/USTC_Software_001.png" alt="big_img_1" width="555"/> </div>
 +
        <h3>What is iGEM?</h3>
 +
<p>The International Genetically Engineered Machine competition (iGEM) is the premiere undergraduate Synthetic Biology competition. Student teams are given a kit of biological parts at the beginning of the summer from the Registry of Standard Biological Parts. Working at their own schools over the summer, they use these parts and new parts of their own design to build biological systems and operate them in living cells. This project design and competition format is an exceptionally motivating and effective teaching method.</p>
 +
               
 +
                  <a href="https://igem.org/About">Read more...</a> 
 +
 +
</div>
 +
<div class="slider_item">
 +
  <div align="center"> <img src="https://static.igem.org/mediawiki/2011/6/61/USTC_Software_002.png" alt="big_img_2" width="555"/> </div>
 +
                <h3>What is Project Lachesis?</h3>
 +
<p>The project Lachesis aims at providing and integrated, easy-using and extensible CAD environment for the general purpose of Synthetic Biology, it adopts an plug-in based structure.We provide three categories of plug-ins:Document parsers that handles various types of files, such as SBML andMoDeL. Models that each represents a specific kind of synthetic biological
 +
model. Views that present graphical user interface for users to work with biological models.</p>
 +
 +
                  <a href="https://2011.igem.org/Team:USTC-Software/project">Read more...</a> 
 +
 +
</div>
 +
<div class="slider_item">
 +
<div align="center"> <img src="https://static.igem.org/mediawiki/2011/f/f4/USTC_Software_003.png" alt="big_img_3" width="555"/></div>
 +
                <h3>Where are we from?</h3>
 +
<p>The University of Science and Technology of China (USTC) is under the jurisdiction of the Chinese Academy of Sciences (CAS).
 +
                As a key university of the nation, it is noted for its advanced science and high technology programs, unique management studies and well-tailored disciplines in the humanities.
 +
                On May 11, the Nature Publishing Group released Nature Publishing Index 2010 China, remarking "a dramatic rise in the quality of research being published by China". University of Science and Technology of China is ranked 3rd of TOP 10 Institutions in Index 2010 China.
 +
              </p>
 +
 +
  <a href="http://en.ustc.edu.cn/about/">Read more...</a>
 +
 +
  </div>
 +
</div>
 +
 +
</div>
 +
    <!-- // Content wrap -->
 +
<br/><br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/> <br/>  <br/> <br/> <br/>  <br/> <br/> <br/>
 +
 +
 +
 +
        <h1>Lachesis</h1>
 +
<!-- Content wrap -->
 +
  <div>
 +
   
 +
        <div class="content_section">
 +
                 
 +
            <div class="intro_box margin_r10">
 +
           
 +
            <h3>Team</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/7/78/USTC_Software_image_02.jpg" alt="product" />
 +
               
 +
              <p class="intro">Nothing gets done by itself so we formed a group of tireless and diligent students came from different faculties (all parts of USTC) and joined our forces at School of Life Sciences. <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/team">Details</a> </div> </p> </div>
 +
           
 +
            <div class="intro_box margin_r10">
 +
            <h3>MoDeL</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="product" />
 +
                   
 +
              <p class="intro">Sorry... <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/model">Details</a> </div> </p> </div>
 +
           
 +
           
 +
            <div class="intro_box margin_r10">
 +
            <h3>Human practice</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/3/3c/USTC_Software_image_04.jpg" alt="product" />
 +
               
 +
              <p class="intro">A survey was conducted during the national science week in the school campus of USTC, where students were asked a few basic questions to discover their opinions on synthetic biology.<div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/human practice">Details</a> </div> </p> </div>
 +
           
 +
            <div class="cleaner"></div>
 +
        </div>
 +
       
 +
        <div class="cleaner_h40"></div>
 +
        <div class="content_section">
 +
       
 +
        <h2>Project</h2>
 +
       
 +
        <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
 +
                   
 +
    <p><span lang="EN-US" xml:lang="EN-US">USTC 2011 Dry Team has worked on a software named Lanchesis.</span></p>
 +
            <div><span lang="EN-US" xml:lang="EN-US">
 +
<p>It is a software mainly worked on:</p>
 +
<P>1、Automatically generating the regulation network simply according to the assembly constructed by users</P>
 +
<p>2、Geting the parameter space of a Biology Network which make the Network have the predict behaviour.</p>
 +
<p>3、Evaluating the sensitivity of a Biology Network using PCA analysis.</p>
 +
<p>4、Making Biology Network easy to see by visualing the network in three windows.Network View,Behaviour View and Reaction View.</p>  </span></div>
 +
<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
 +
       
 +
        </div>
 +
     
 +
 
 +
  <table width="921" height="551" border="0">
 +
    <tr>
 +
      <td width="745" height="547"><table width="739" height="545" border="0">
 +
<tr>
 +
  <td width="363" height="81"><h2>Sponsor</h2></td>
 +
  <td width="358"></td>
 +
 +
</tr>
 +
<tr>
 +
  <td width="363" height="87">
 +
  <a href="http://www.ustcif.org"> <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_IF_LOGO.jpg" width="363" height="90"/></a> </td>
 +
  <td width="358"><p align="center"><a href="http://www.ustcif.org"><strong>Initiative Foundation, USTC</strong></a></p></td>
 +
</tr>
 +
<tr>
 +
  <td height="87"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png" width="363" height="85" /></td>
 +
  <td><p align="center"><strong>Teaching Affair Office, USTC</strong></p></td>
 +
</tr>
 +
<tr>
 +
  <td height="87"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="363" height="85" /></td>
 +
  <td><p align="center"><strong>School of Life Sciences, USTC</strong></p></td>
 +
</tr>
 +
<tr>
 +
  <td height="87"><img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="363" height="85" /></td>
 +
  <td><p align="center"><strong>Graduate School, USTC</strong></p></td>
 +
</tr>
 +
<tr>
 +
  <td height="102"><img src="https://static.igem.org/mediawiki/2011/2/25/USTC_Software_chemistry.jpg" width="363" height="85" /></td>
 +
  <td><p align="center"><strong>School of Chemistry and Materials Science, USTC</strong></p></td>
 +
</tr>
 +
</table></td>
 +
     
 +
     
 +
     
 +
     
 +
     
 +
     
 +
     
 +
      <td width="166">  <table width="166" height="255" border="0">
 +
    <tr>
 +
      <th width="424" height="56" scope="col"><h2>Vistor</h2></th>
 +
    </tr>
 +
    <tr>
 +
      <td height="190">
 +
     
 +
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 +
 
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Revision as of 08:57, 4 October 2011


Team:USTC-Software - 2011.igem.org

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What is iGEM?

The International Genetically Engineered Machine competition (iGEM) is the premiere undergraduate Synthetic Biology competition. Student teams are given a kit of biological parts at the beginning of the summer from the Registry of Standard Biological Parts. Working at their own schools over the summer, they use these parts and new parts of their own design to build biological systems and operate them in living cells. This project design and competition format is an exceptionally motivating and effective teaching method.

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What is Project Lachesis?

The project Lachesis aims at providing and integrated, easy-using and extensible CAD environment for the general purpose of Synthetic Biology, it adopts an plug-in based structure.We provide three categories of plug-ins:Document parsers that handles various types of files, such as SBML andMoDeL. Models that each represents a specific kind of synthetic biological model. Views that present graphical user interface for users to work with biological models.

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Where are we from?

The University of Science and Technology of China (USTC) is under the jurisdiction of the Chinese Academy of Sciences (CAS). As a key university of the nation, it is noted for its advanced science and high technology programs, unique management studies and well-tailored disciplines in the humanities. On May 11, the Nature Publishing Group released Nature Publishing Index 2010 China, remarking "a dramatic rise in the quality of research being published by China". University of Science and Technology of China is ranked 3rd of TOP 10 Institutions in Index 2010 China.

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Lachesis

Team

product

Nothing gets done by itself so we formed a group of tireless and diligent students came from different faculties (all parts of USTC) and joined our forces at School of Life Sciences.

Details

MoDeL

product

Sorry...

Details

Human practice

product

A survey was conducted during the national science week in the school campus of USTC, where students were asked a few basic questions to discover their opinions on synthetic biology.

Details

Project

image

USTC 2011 Dry Team has worked on a software named Lanchesis.

It is a software mainly worked on:

1、Automatically generating the regulation network simply according to the assembly constructed by users

2、Geting the parameter space of a Biology Network which make the Network have the predict behaviour.

3、Evaluating the sensitivity of a Biology Network using PCA analysis.

4、Making Biology Network easy to see by visualing the network in three windows.Network View,Behaviour View and Reaction View.

Details

Sponsor

Initiative Foundation, USTC

Teaching Affair Office, USTC

School of Life Sciences, USTC

Graduate School, USTC

School of Chemistry and Materials Science, USTC

Vistor


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