Team:Queens Canada/Parts/Contributions
From 2011.igem.org
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<regulartext> - KAPA HiFi™ Hotstart Kit</regulartext><br> | <regulartext> - KAPA HiFi™ Hotstart Kit</regulartext><br> | ||
<regulartext> - 10 µl of each of the 2 linear BioBrick parts to be ligated</regulartext><br> | <regulartext> - 10 µl of each of the 2 linear BioBrick parts to be ligated</regulartext><br> | ||
- | + | <regulartext> - 10 µM solution of left primer of BioBrick part A</regulartext><br> | |
<regulartext> - 10 µM solution of right primer of BioBrick part B</regulartext><br> | <regulartext> - 10 µM solution of right primer of BioBrick part B</regulartext><br> | ||
<regulartext> - Fermentas FastDigest SpeI system </regulartext><br> | <regulartext> - Fermentas FastDigest SpeI system </regulartext><br> | ||
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<regulartext> - Transilluminator</regulartext><p> | <regulartext> - Transilluminator</regulartext><p> | ||
- | <regulartext> <b> Method </b> </regulartext> | + | <regulartext> <b> Method </b> </regulartext><br> |
+ | <regulartext> 1. Digest linear BioBrick part A with the SpeI FastDigestion system, and digest linear BioBrick part B with the XbaI FastDigestion system. | ||
+ | 2. Perform enzymatic cleanup for one of the digest mixtures using EZ-10 PCR Product Purification kit. | ||
+ | 3. Mixing of the clean-up product and other digestion product in a 1:1 ratio to obtain a 10 µl mixture. | ||
+ | 4. Use the 10 µl mixture and the Fast Ligase System to ligate the two BioBrick parts together | ||
+ | 5. Use the ligation product from the previous step as the template DNA for PCR amplification. Use the 10 µM solution of left primer of BioBrick part A and the 10 µM solution of right primer of BioBrick part B as primers for the PCR Amplification. | ||
+ | 6. Follow the instructions in the KAPA HiFi™ Hotstart Kit to perform the PCR reaction. Only 20 to 25 thermocycles are necessary to amplify the ligation product | ||
+ | 7. Create a 1% agarose gel for electrophoresis of the PCR products | ||
+ | 8. With loading dye, load the entire digestion mixture to the 1% agarose gel. Perform gel electrophoresis at 100V and 400 mA for 60 minutes. | ||
+ | 9. Using transilluminator, gel extract the visible DNA product corresponding to the right length of the ligation product | ||
+ | 10. Follow the instructions in the Bio Basics EZ-10 Purification Kit, perform purification of the gel extracted products. | ||
+ | 11. This gel extracted product may be used for further assembly and processing | ||
+ | </regulartext> | ||
Revision as of 18:09, 28 September 2011