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Team:Wageningen UR/Project/ModelingProj1
From 2011.igem.org
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Since our bio bricked oscillatory system is based on the design published by Danino et al. in the paper [http://www.nature.com/nature/journal/v463/n7279/abs/nature08753.html “A synchronized quorum of genetic clocks”], our first model of the system is a reproduction of the mathematical model in the supplementary information accompanying the publication mentioned. In their simulations, Danino et al. used the following set of delay differential equations, which we used as base for our simulation tool written in matlab. }} | Since our bio bricked oscillatory system is based on the design published by Danino et al. in the paper [http://www.nature.com/nature/journal/v463/n7279/abs/nature08753.html “A synchronized quorum of genetic clocks”], our first model of the system is a reproduction of the mathematical model in the supplementary information accompanying the publication mentioned. In their simulations, Danino et al. used the following set of delay differential equations, which we used as base for our simulation tool written in matlab. }} | ||
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[[File:Equations_hasty_WUR.png|370px|center]] | [[File:Equations_hasty_WUR.png|370px|center]] | ||
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'''Above:''' Set of delay differential equations used by Danino et al. to model the oscillatory behaviour of the design using a positive and negative feedback loop. | '''Above:''' Set of delay differential equations used by Danino et al. to model the oscillatory behaviour of the design using a positive and negative feedback loop. | ||
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| + | A: AiiA | ||
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| + | I: LuxI | ||
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| + | H_i | ||
}} | }} | ||
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| + | <math> x^2 </math> | ||
| + | </html> | ||
Revision as of 17:52, 11 September 2011
