Team:USTC-Software

From 2011.igem.org

(Difference between revisions)
 
(121 intermediate revisions not shown)
Line 1: Line 1:
__NOTOC__
__NOTOC__
-
{{:Team:USTC-Software/temp}}
+
{{:Team:USTC-Software/header}}
-
 
+
-
 
+
<html xmlns="http://www.w3.org/1999/xhtml">
<html xmlns="http://www.w3.org/1999/xhtml">
-
 
<head>
<head>
-
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
 
-
<title>Team:USTC-Software - 2011.igem.org/</title>
 
-
<meta name="description" content="home"/>
 
-
<meta name="keywords" content="USTC-Software,iGEM,synthetic biology"/>
 
-
<meta name="author" content="Ao Xu">
 
-
<meta name="copyright" content="Copyright (c) 2011 iGEM USTC Software" />
 
-
<style type="text/css">
 
-
body {
+
<!-- Javascript-->
-
margin: 0;
+
-
padding: 0;
+
-
line-height: 1.5em;
+
-
font-family: Georgia, "Times New Roman", Times, serif;
+
-
font-size: 12px;
+
-
color: #555a4a;
+
-
        background: #a0c73f;
+
-
}
+
-
a:link, a:visited { color: #0683ab; text-decoration: none; font-weight: normal; }
+
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.3/jquery.min.js"></script>
-
a:active, a:hover { color: #0683ab; text-decoration: underline; }
+
<script type="text/javascript">
-
 
+
$(document).ready(function() {
-
p { margin: 0px; padding: 0px; }
+
//Set Default State of each portfolio piece
-
img { margin: 0px; padding: 0px; border: none; }
+
$(".paging").show();
-
 
+
$(".paging a:first").addClass("active");
-
.cleaner { clear: both; width: 100%; height: 0px; font-size: 0px;  }  /*This is important!*/
+
-
.cleaner_h30 { clear: both; width:100%; height: 30px; }
+
//Get size of images, how many there are, then determin the size of the image reel.
-
.cleaner_h40 { clear: both; width:100%; height: 40px; }
+
var imageWidth = $(".window").width();
-
 
+
var imageSum = $(".image_reel img").size();
-
.margin_r10 { margin-right: 10px; }
+
var imageReelWidth = imageWidth * imageSum;
-
 
+
-
.float_l { float: left; }
+
-
.float_r { float:  right; }
+
-
 
+
-
#header_wrapper {
+
-
width: 100%;
+
-
height: 265px;
+
-
background: url(https://static.igem.org/mediawiki/2011/0/04/USTC_Software_header.jpg) no-repeat top center;
+
-
}
+
-
 
+
-
#header {
+
-
position: relative;
+
-
width: 980px;
+
-
height: 265px;
+
-
padding: 0 10px;
+
-
margin: 0 auto;
+
-
background: url(https://static.igem.org/mediawiki/2011/0/04/USTC_Software_header.jpg) no-repeat top center;
+
-
}
+
-
 
+
-
/* site title */
+
-
 
+
-
#header  #site_title {
+
-
float: left;
+
-
width: 200px;
+
-
padding: 33px 0;
+
-
}
+
-
 
+
-
#site_title h1 {
+
-
margin: 0;
+
-
padding: 3px;
+
-
font-family:"Times New Roman", Times, serif;
+
-
color:#000;
+
-
font-size:24px;
+
-
}
+
-
 
+
-
#site_title h1 a {
+
-
margin: 0px;
+
-
padding: 0px;
+
-
font-size: 30px;
+
-
color: #ffffff;
+
-
font-weight: bold;
+
-
text-decoration: none;
+
-
}
+
-
 
+
-
#site_title h1 a:hover {
+
-
font-weight: bold;
+
-
text-decoration: none;
+
-
}
+
-
 
+
-
#site_title h1 a span {
+
-
display: block;
+
-
margin-left: 2px;
+
-
font-size: 14px;
+
-
color: #416902;
+
-
font-weight: bold;
+
-
letter-spacing: 2px;
+
-
}
+
-
 
+
-
/* end of site title */
+
-
/* ---------- Navigation ---------- */
+
-
 
+
-
ul  {
+
-
      list-style-image: none;
+
-
}
+
-
 
+
-
#nav {
+
-
float: right;
+
-
font-family: Arial, Helvetica, sans-serif;
+
-
font-weight: bold;
+
-
font-size: 12px;
+
-
padding-top: 70px;
+
-
height: 43px;
+
-
}
+
-
 
+
-
#nav .last {
+
-
padding-right: 2px;
+
-
background-image:url(https://static.igem.org/mediawiki/2011/5/59/USTC_Software_nav_button_sep.jpg);
+
-
background-repeat:no-repeat;
+
-
background-position:right;
+
-
}
+
-
 
+
-
#nav, #nav ul{
+
-
margin:0;
+
-
padding:0;
+
-
list-style-type:none;
+
-
list-style-position:outside;
+
-
position:relative;
+
-
line-height:1.5em;
+
-
}
+
-
 
+
-
#nav .on {
+
-
color:#fff !important;
+
-
background-image: url(https://static.igem.org/mediawiki/2011/0/00/USTC_Software_nav_button_bg.jpg) !important;
+
-
background-position: bottom left !important;
+
-
}
+
-
 
+
-
#nav a:link, #nav a:active, #nav a:visited{
+
-
    display:block;
+
-
    padding: 14px 35px;
+
-
    color:#a5a5a5;
+
-
    text-decoration:none;
+
-
text-transform: uppercase;
+
-
background-image: url(https://static.igem.org/mediawiki/2011/0/00/USTC_Software_nav_button_bg.jpg);
+
-
background-position: top left;
+
-
}
+
-
 
+
-
#nav a:hover {
+
-
    color:#fff;
+
-
background-image: url(https://static.igem.org/mediawiki/2011/0/00/USTC_Software_nav_button_bg.jpg);
+
-
background-position: bottom left;
+
-
}
+
-
 
+
-
#nav li{
+
-
    float:left;
+
-
    position:relative;
+
-
}
+
//Adjust the image reel to its new size
-
 
+
$(".image_reel").css({'width' : imageReelWidth});
-
#nav ul {
+
-
    position:absolute;
+
//Paging + Slider Function
-
    width:13em;
+
rotate = function(){
-
    top:3.8em;
+
var triggerID = $active.attr("rel") - 1; //Get number of times to slide
-
    display:none;
+
var image_reelPosition = triggerID * imageWidth; //Determines the distance the image reel needs to slide
-
z-index: 1;
+
-
}
+
-
 
+
-
#nav li ul a {
+
-
    width:9em;
+
-
    float:left;
+
-
background-color: #2e2e2e;
+
-
background-image: none !important;
+
-
}
+
-
 
+
-
#nav li ul a:hover {
+
-
background-color: #292929;
+
-
}
+
-
 
+
-
#nav ul ul{
+
-
top:auto;
+
-
}
+
-
 
+
-
#nav li ul ul {
+
-
    left:12em;
+
-
    margin:0px 0 0 10px;
+
-
    }
+
-
 
+
-
#nav li:hover ul ul, #nav li:hover ul ul ul, #nav li:hover ul ul ul ul{
+
-
    display:none;
+
-
    }
+
-
 
+
-
#nav li:hover ul, #nav li li:hover ul, #nav li li li:hover ul, #nav li li li li:hover ul{
+
-
    display:block;
+
-
    }
+
-
 
+
-
/*end of nav*/
+
-
 
+
-
/* Search */
+
-
#header #search_box {
+
-
position: absolute;
+
-
width: 333px;
+
-
height: 53px;
+
-
bottom: 64px;
+
-
right: 15px;
+
-
background: url(./images/USTC_Software_search.png)
+
-
}
+
-
 
+
-
#search_box form {
+
-
width: 280px;
+
-
height: 27px;
+
-
margin: 0;
+
-
padding: 25px 0 0 0;
+
-
}
+
-
 
+
-
#searchfield {
+
-
height: 17px;
+
-
width: 270px;
+
-
padding: 4px 5px 6px 5px;
+
-
color: #fff;
+
-
font-size: 12px;
+
-
font-variant: normal;
+
-
line-height: normal;
+
-
background: none;
+
-
border: none;
+
-
}
+
-
 
+
-
/* end of search */
+
-
 
+
-
/*clock_box*/
+
-
#header #clock_box {
+
-
position: absolute;
+
-
width: 333px;
+
-
height: 42px;
+
-
bottom: 15px;
+
-
right: 14px;
+
-
}
+
-
 
+
-
#clock_box form {
+
-
width: 280px;
+
-
height: 27px;
+
-
margin: 0;
+
-
padding: 25px 0 0 0;
+
-
}
+
-
 
+
-
/* end of clock_box*/
+
-
/* content_wrapper */
+
$(".paging a").removeClass('active'); //Remove all active class
 +
$active.addClass('active'); //Add active class (the $active is declared in the rotateSwitch function)
 +
 +
//Slider Animation
 +
$(".image_reel").animate({
 +
left: -image_reelPosition
 +
}, 500 );
 +
 +
};
-
#content {
+
//Rotation + Timing Event
-
background-color:#FFF;
+
rotateSwitch = function(){
-
float: left;
+
play = setInterval(function(){ //Set timer - this will repeat itself every 3 seconds
-
width: 600px;
+
$active = $('.paging a.active').next();
-
}
+
if ( $active.length === 0) { //If paging reaches the end...
 +
$active = $('.paging a:first'); //go back to first
 +
}
 +
rotate(); //Trigger the paging and slider function
 +
}, 4000); //Timer speed in milliseconds
 +
};
 +
 +
rotateSwitch(); //Run function on launch
 +
 +
//On Hover
 +
$(".image_reel a").hover(function() {
 +
clearInterval(play); //Stop the rotation
 +
}, function() {
 +
rotateSwitch(); //Resume rotation
 +
});
 +
 +
//On Click
 +
$(".paging a").click(function() {
 +
$active = $(this); //Activate the clicked paging
 +
//Reset Timer
 +
clearInterval(play); //Stop the rotation
 +
rotate(); //Trigger rotation immediately
 +
rotateSwitch(); // Resume rotation
 +
return false; //Prevent browser jump to link anchor
 +
});
 +
 +
});
 +
</script>
-
#content p {
 
-
text-align: justify;
 
-
margin-bottom: 10px;
 
-
}
 
-
#content h2 {
+
</head>
-
color: #3a5909;
+
-
font-size: 24px;
+
-
padding: 0 0 60px 20px;
+
-
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
+
-
}
+
-
#content_wrapper {
+
<body>
-
width: 920px;
+
-
margin: 0 auto;
+
-
padding: 30px 40px;
+
-
background: url(https://static.igem.org/mediawiki/2011/b/bc/USTC_Software_content.jpg) repeat-y;
+
-
}
+
-
#content_wrapper h1 {
+
<div id="content_wrapper">
-
color: #3a5909;
+
-
font-size: 24px;
+
-
padding: 0 0 60px 20px;
+
-
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
+
-
}
+
-
#content_wrapper p {
+
<div align="center">
-
font-family: Verdana, Arial;
+
<table id="rotator_news">
-
font-size: 14px;
+
<tr>
-
}
+
<td id="window_images">
 +
<div class="main_view">
 +
    <div class="window">
 +
        <div class="image_reel">
 +
                    <img src="https://static.igem.org/mediawiki/2011/b/bf/USTC_Software_L001.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/d/da/USTC_Software_L002.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/e/e6/USTC_Software_L003.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/9/96/USTC_Software_L004.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/6/60/USTC_Software_L005.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/2/22/USTC_Software_L006.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_L007.png" style=" margin-right:0px; width:640px; height:400px" alt="" />             
 +
        </div>
 +
    </div>
 +
    <div class="paging">
 +
        <a href="#" rel="1">1</a>
 +
        <a href="#" rel="2">2</a>
 +
        <a href="#" rel="3">3</a>
 +
        <a href="#" rel="4">4</a>
 +
        <a href="#" rel="5">5</a>
 +
        <a href="#" rel="6">6</a>
 +
        <a href="#" rel="7">7</a>
 +
 +
    </div>
 +
</div> <!-- close "main_view" div -->
 +
</td>
 +
</tr>
 +
</table>
 +
</div>
 +
<br/><br/>
-
#content_wrapper_bottom {
+
        <h1>Lachesis</h1>
-
width: 1000px;
+
<!-- Content wrap -->
-
height: 15px;
+
  <div>
-
margin: 0 auto;
+
   
-
background: url(https://static.igem.org/mediawiki/2011/a/a5/USTC_Software_content_bottom.jpg) no-repeat;
+
    <div class="content_section">
-
    background-color: #a0c73f;
+
                 
-
}
+
            <div class="intro_box margin_r10">
 +
           
 +
            <h3>Team</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/7/78/USTC_Software_image_02.jpg" alt="product" />
 +
               
 +
              <p class="intro">Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year. <div class="button_01">
 +
<a href="https://2011.igem.org/Team:USTC-Software/team">Details</a> </div> </p> </div>           
 +
            <div class="intro_box margin_r10">
 +
            <h3>Models</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="product" />
 +
              <p class="intro">Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.
-
/* end of content_wrapper */
+
              <div class="button_01">
 +
<a href="https://2011.igem.org/Team:USTC-Software/documents">Details</a> </div> </p> </div>
 +
           
 +
            <div class="intro_box margin_r10">
 +
            <h3>Human practice</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/3/3c/USTC_Software_image_04.jpg" alt="product" />
 +
               
 +
              <p class="intro">We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic
 +
Biology.<div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/human practice">Details</a> </div> </p> </div>
 +
           
 +
            <div class="cleaner"></div>
 +
    </div>
 +
       
 +
        <div class="cleaner_h40"></div>
 +
    <div class="content_section">
 +
       
 +
        <h2>Project</h2>
 +
       
 +
    <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
 +
                   
 +
    <p>
 +
<span lang="EN-US" xml:lang="EN-US">Our project this year is named Lachesis, which consists of the following</span>
 +
<br/>
 +
 +
          <div><span lang="EN-US" xml:lang="EN-US">
 +
1.Automatic generation of biological reaction network simply from biobrick assemblys.<br/>
 +
2.Data exchange,Reaction network visualization.<br/>
 +
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.<br/>
 +
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.<br/>
 +
</p>
 +
</span>
 +
</div>
-
/* content */
+
<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
-
.content_section {
+
       
-
clear: both;
+
    </div>
-
width: 100%;
+
<br/>
-
}
+
     
 +
<h2>Sponsers</h2>
 +
<table width="917" border="0">
 +
  <tr>
 +
    <td width="180"><img src="https://static.igem.org/mediawiki/2011/5/5b/USTC_Software_IF_LOGO_2.jpg"  width="180" /></td>
 +
    <td width="867">
 +
        <table width="724" height="172" border="0">
 +
          <tr>
 +
            <td width="227"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png"  width="238" height="83"/></td>
 +
            <td width="234"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="238" height="83"/></td>
 +
            <td width="249"><img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="238" height="83"/></td>
 +
          </tr>
 +
          <tr>
 +
            <td height="86"><img src="https://static.igem.org/mediawiki/2011/1/18/USTC_Software_information.png"  width="238" height="83"/></td>
 +
            <td><img src="https://static.igem.org/mediawiki/2011/2/25/USTC_Software_chemistry.jpg"  width="238" height="83"/></td>
 +
            <td><img src="https://static.igem.org/mediawiki/2011/c/cf/USTC_Software_math.jpg"  width="238" height="83"/></td>
 +
          </tr>
 +
        </table>
 +
    </td>
 +
  </tr>
 +
</table>
-
.intro_box {
 
-
float: left;
 
-
width: 190px;
 
-
padding-bottom: 10px;
 
-
border-bottom: 1px dotted #666;
 
-
margin-bottom: 20px;
 
-
}
 
-
.fl_image {
+
-
float: left;
+
-
margin: 3px 15px 5px 0;
+
-
}
+
-
#content .product_box p {
 
-
padding: 0;
 
-
margin: 0 0 5px 0;
 
-
}
 
-
#content .product_box a {
+
<br/> 
-
color: #000000;
+
     
-
font-weight: bold;
+
<br/>
-
}
+
-
#content .em_text {
+
<h2>Vistor</h2>
-
color: #537c11;
+
-
}
+
-
.inro {
+
  <div id="clustrmaps-widget"></div><script type="text/javascript">var _clustrmaps = {'url' : 'https://2011.igem.org/Team:USTC-Software', 'user' : 930921, 'server' : '4', 'id' : 'clustrmaps-widget', 'version' : 1, 'date' : '2011-10-02', 'lang' : 'zh', 'corners' : 'square' };(function (){ var s = document.createElement('script'); s.type = 'text/javascript'; s.async = true; s.src = 'http://www4.clustrmaps.com/counter/map.js'; var x = document.getElementsByTagName('script')[0]; x.parentNode.insertBefore(s, x);})();</script><noscript><a href="http://www4.clustrmaps.com/user/e30e3469"><img src="http://www4.clustrmaps.com/stats/maps-no_clusters/2011.igem.org-Team-USTC-Software-thumb.jpg" alt="Locations of visitors to this page" /></a></noscript>
-
color: #C30;
+
-
font-size: 14px;
+
-
font-weight: bold;
+
-
}
+
-
.intro_box h3 {
+
</div>
-
background: #63a103;
+
  <!-- end of content -->
-
padding: 3px 10px;
+
   
-
margin: 0 0 10px 0;
+
  <div class="cleaner"></div>
-
color: #ffffff;
+
   
-
font-size: 12px;
+
    <br/> <br/>
-
}
+
   
 +
</div>
 +
   
 +
    <div id="content_wrapper_bottom"></div> <!-- end of content_wrapper -->
-
.intro_box img {
+
<script type="text/javascript">
-
width: 180px;
+
-
height: 100px;
+
-
border: 5px solid #e6e0ce;
+
-
margin-bottom: 10px;
+
-
}
+
-
/* footer */
+
  var _gaq = _gaq || [];
 +
  _gaq.push(['_setAccount', 'UA-25857438-1']);
 +
  _gaq.push(['_trackPageview']);
-
#mfooter {
+
  (function() {
-
width: 980px;
+
    var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
-
margin: 0 auto;
+
    ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
-
padding: 30px 10px;
+
     var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
-
text-align: center;
+
  })();
-
color: #333333;
+
-
     background-color: #a0c73f;
+
-
}
+
-
#mfooter a {
+
</script>
-
color:#000;
+
-
}
+
-
#mfooter .mfooter_menu {
+
<div id="mfooter">
-
margin: 0 0 10px 0;
+
-
padding: 0px;
+
-
list-style: none;
+
-
}
+
-
.mfooter_menu li {
+
  <ul class="mfooter_menu">
-
margin: 0px;
+
                <li><a href="#" target="_parent">Home</a></li>
-
padding: 0 20px;
+
                <li><a href="https://2011.igem.org/Team:USTC-Software/project" target="_parent">Project</a></li>
-
display: inline;
+
                <li><a href="https://2011.igem.org/Team:USTC-Software/notebook" target="_parent">Notebook</a></li>
-
border-right: 1px solid #000000;
+
                <li><a href="https://2011.igem.org/Team:USTC-Software/team" class="current">Team</a></li>
-
}
+
                <li><a href="https://2011.igem.org/Team:USTC-Software/human practice" target="_parent">Human practice</a></li>
 +
                <li  class="last_menu"><a href="https://2011.igem.org/Team:USTC-Software/download" target="_parent">Download</a></li>
 +
               
 +
  </ul>
 +
  <b> Welcome to &#160;&#160;<a href="http://en.ustc.edu.cn/" target="_blank">University of Science and Technology of China</a>&#160;! </b>
-
.mfooter_menu .last_menu {
+
  <div id="to_org_box"><a href="https://2011.igem.org/Main_Page"><img src="https://static.igem.org/mediawiki/2011/8/88/USTC_Software_back_to_igem.png" width="69" height="70"alt="Go back to igem.org"/></a>
-
border: none;
+
  </div>
-
}
+
-
#totop_box {
+
  <div id="totop_box">
-
position:fixed;
+
      <a href="#top"><img src="https://static.igem.org/mediawiki/2011/e/eb/USTC_Software_top_icon.gif" width="76" height="72"alt="Go back to Top"/></a>
-
width: 77px;
+
  </div>
-
height: 75px;
+
-
bottom: 21px;
+
-
right: 15px;
+
-
}
+
-
#totop_box form {
+
</div> <!-- end of mfooter -->
-
width: 280px;
+
-
height: 27px;
+
-
margin: 0;
+
-
padding: 25px 0 0 0;
+
-
}
+
-
 
+
-
#to_org_box {
+
-
position:fixed;
+
-
width: 77px;
+
-
height: 75px;
+
-
bottom: 21px;
+
-
right: 105px;
+
-
}
+
-
 
+
-
#to_org_box form {
+
-
width: 280px;
+
-
height: 27px;
+
-
margin: 0;
+
-
padding: 25px 0 0 0;
+
-
}
+
-
/* end of footer*/
+
-
 
+
-
.button_01 a {
+
-
display: block;
+
-
width: 102px;
+
-
height: 23px;
+
-
padding: 7px 0 0 0;
+
-
background: url(./images/USTC_Software_button.png)  no-repeat;
+
-
color: #333;
+
-
font-size: 12px;
+
-
font-weight: bold;
+
-
text-align: center;
+
-
text-decoration: none;
+
-
}
+
-
 
+
-
.button_01 a:hover {
+
-
color: #fff;
+
-
    background:url(./images/USTC_Software_button_hover.png) no-repeat;
+
-
}
+
-
 
+
-
#sidebar {
+
-
float: right;
+
-
width: 280px;
+
-
padding: 0;
+
-
background: url(./images/USTC_Software_sidebar.jpg) repeat-y;
+
-
}
+
-
 
+
-
#sidebar .sidebar_section {
+
-
margin-bottom: 30px;
+
-
}
+
-
 
+
-
#sidebar .sidebar_section_content {
+
-
}
+
-
 
+
-
#sidebar h2 {
+
-
color: #3a5909;
+
-
font-size: 24px;
+
-
padding: 0 0 60px 20px;
+
-
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
+
-
}
+
-
 
+
-
#sidebar .categories_list {
+
-
margin: 0;
+
-
padding: 0;
+
-
list-style: none;
+
-
}
+
-
 
+
-
#sidebar .categories_list li {
+
-
padding: 0;
+
-
margin: 0;
+
-
}
+
-
 
+
-
.categories_list li a {
+
-
display: block;
+
-
color: #201f1c;
+
-
padding: 5px 0 5px 20px;
+
-
background: url(./images/USTC_Software_list.png) center left no-repeat;
+
-
}
+
-
.categories_list li a:hover {
+
-
color: #537c11;
+
-
text-decoration: none;
+
-
}
+
-
 
+
-
.sidebar_section label {
+
-
display: block;
+
-
margin-bottom: 10px;
+
-
}
+
-
 
+
-
.sidebar_section #input_field {
+
-
height: 20px;
+
-
width: 233px;
+
-
padding: 0 5px;
+
-
margin-bottom: 10px;
+
-
color: #000000;
+
-
font-size: 12px;
+
-
font-variant: normal;
+
-
line-height: normal;
+
-
}
+
-
 
+
-
.sidebar_section #submit_btn{
+
-
float: right;
+
-
height: 30px;
+
-
width: 80px;
+
-
margin: 0px;
+
-
padding: 3px 0 15px 0;
+
-
cursor: pointer;
+
-
font-size: 12px;
+
-
text-align: center;
+
-
vertical-align: bottom;
+
-
white-space: pre;
+
-
outline: none;
+
-
}
+
-
 
+
-
</style>
+
-
 
+
-
<!-- Javascript-->
+
-
    <!--jquery-1.2.3.min.js-->
+
</body>
-
<script type='text/javascript'>
+
</html>
-
      (function(){if(window.jQuery)var _jQuery=window.jQuery;var jQuery=window.jQuery=function(selector,context){return new jQuery.prototype.init(selector,context);};if(window.$)var _$=window.$;window.$=jQuery;var quickExpr=/^[^<]*(<(.|\s)+>)[^>]*$|^#(\w+)$/;var isSimple=/^.[^:#\[\.]*$/;jQuery.fn=jQuery.prototype={init:function(selector,context){selector=selector||document;if(selector.nodeType){this[0]=selector;this.length=1;return this;}else if(typeof selector=="string"){var match=quickExpr.exec(selector);if(match&&(match[1]||!context)){if(match[1])selector=jQuery.clean([match[1]],context);else{var elem=document.getElementById(match[3]);if(elem)if(elem.id!=match[3])return jQuery().find(selector);else{this[0]=elem;this.length=1;return this;}else
+
-
      selector=[];}}else
+
-
      return new jQuery(context).find(selector);}else if(jQuery.isFunction(selector))return new jQuery(document)[jQuery.fn.ready?"ready":"load"](selector);return this.setArray(selector.constructor==Array&&selector||(selector.jquery||selector.length&&selector!=window&&!selector.nodeType&&selector[0]!=undefined&&selector[0].nodeType)&&jQuery.makeArray(selector)||[selector]);},jquery:"1.2.3",size:function(){return this.length;},length:0,get:function(num){return num==undefined?jQuery.makeArray(this):this[num];},pushStack:function(elems){var ret=jQuery(elems);ret.prevObject=this;return ret;},setArray:function(elems){this.length=0;Array.prototype.push.apply(this,elems);return this;},each:function(callback,args){return jQuery.each(this,callback,args);},index:function(elem){var ret=-1;this.each(function(i){if(this==elem)ret=i;});return ret;},attr:function(name,value,type){var options=name;if(name.constructor==String)if(value==undefined)return this.length&&jQuery[type||"attr"](this[0],name)||undefined;else{options={};options[name]=value;}return this.each(function(i){for(name in options)jQuery.attr(type?this.style:this,name,jQuery.prop(this,options[name],type,i,name));});},css:function(key,value){if((key=='width'||key=='height')&&parseFloat(value)<0)value=undefined;return this.attr(key,value,"curCSS");},text:function(text){if(typeof text!="object"&&text!=null)return this.empty().append((this[0]&&this[0].ownerDocument||document).createTextNode(text));var ret="";jQuery.each(text||this,function(){jQuery.each(this.childNodes,function(){if(this.nodeType!=8)ret+=this.nodeType!=1?this.nodeValue:jQuery.fn.text([this]);});});return ret;},wrapAll:function(html){if(this[0])jQuery(html,this[0].ownerDocument).clone().insertBefore(this[0]).map(function(){var elem=this;while(elem.firstChild)elem=elem.firstChild;return elem;}).append(this);return this;},wrapInner:function(html){return this.each(function(){jQuery(this).contents().wrapAll(html);});},wrap:function(html){return this.each(function(){jQuery(this).wrapAll(html);});},append:function(){return this.domManip(arguments,true,false,function(elem){if(this.nodeType==1)this.appendChild(elem);});},prepend:function(){return this.domManip(arguments,true,true,function(elem){if(this.nodeType==1)this.insertBefore(elem,this.firstChild);});},before:function(){return this.domManip(arguments,false,false,function(elem){this.parentNode.insertBefore(elem,this);});},after:function(){return this.domManip(arguments,false,true,function(elem){this.parentNode.insertBefore(elem,this.nextSibling);});},end:function(){return this.prevObject||jQuery([]);},find:function(selector){var elems=jQuery.map(this,function(elem){return jQuery.find(selector,elem);});return this.pushStack(/[^+>] [^+>]/.test(selector)||selector.indexOf("..")>-1?jQuery.unique(elems):elems);},clone:function(events){var ret=this.map(function(){if(jQuery.browser.msie&&!jQuery.isXMLDoc(this)){var clone=this.cloneNode(true),container=document.createElement("div");container.appendChild(clone);return jQuery.clean([container.innerHTML])[0];}else
+
-
      return this.cloneNode(true);});var clone=ret.find("*").andSelf().each(function(){if(this[expando]!=undefined)this[expando]=null;});if(events===true)this.find("*").andSelf().each(function(i){if(this.nodeType==3)return;var events=jQuery.data(this,"events");for(var type in events)for(var handler in events[type])jQuery.event.add(clone[i],type,events[type][handler],events[type][handler].data);});return ret;},filter:function(selector){return this.pushStack(jQuery.isFunction(selector)&&jQuery.grep(this,function(elem,i){return selector.call(elem,i);})||jQuery.multiFilter(selector,this));},not:function(selector){if(selector.constructor==String)if(isSimple.test(selector))return this.pushStack(jQuery.multiFilter(selector,this,true));else
+
-
      selector=jQuery.multiFilter(selector,this);var isArrayLike=selector.length&&selector[selector.length-1]!==undefined&&!selector.nodeType;return this.filter(function(){return isArrayLike?jQuery.inArray(this,selector)<0:this!=selector;});},add:function(selector){return!selector?this:this.pushStack(jQuery.merge(this.get(),selector.constructor==String?jQuery(selector).get():selector.length!=undefined&&(!selector.nodeName||jQuery.nodeName(selector,"form"))?selector:[selector]));},is:function(selector){return selector?jQuery.multiFilter(selector,this).length>0:false;},hasClass:function(selector){return this.is("."+selector);},val:function(value){if(value==undefined){if(this.length){var elem=this[0];if(jQuery.nodeName(elem,"select")){var index=elem.selectedIndex,values=[],options=elem.options,one=elem.type=="select-one";if(index<0)return null;for(var i=one?index:0,max=one?index+1:options.length;i<max;i++){var option=options[i];if(option.selected){value=jQuery.browser.msie&&!option.attributes.value.specified?option.text:option.value;if(one)return value;values.push(value);}}return values;}else
+
-
      return(this[0].value||"").replace(/\r/g,"");}return undefined;}return this.each(function(){if(this.nodeType!=1)return;if(value.constructor==Array&&/radio|checkbox/.test(this.type))this.checked=(jQuery.inArray(this.value,value)>=0||jQuery.inArray(this.name,value)>=0);else if(jQuery.nodeName(this,"select")){var values=value.constructor==Array?value:[value];jQuery("option",this).each(function(){this.selected=(jQuery.inArray(this.value,values)>=0||jQuery.inArray(this.text,values)>=0);});if(!values.length)this.selectedIndex=-1;}else
+
-
      this.value=value;});},html:function(value){return value==undefined?(this.length?this[0].innerHTML:null):this.empty().append(value);},replaceWith:function(value){return this.after(value).remove();},eq:function(i){return this.slice(i,i+1);},slice:function(){return this.pushStack(Array.prototype.slice.apply(this,arguments));},map:function(callback){return this.pushStack(jQuery.map(this,function(elem,i){return callback.call(elem,i,elem);}));},andSelf:function(){return this.add(this.prevObject);},data:function(key,value){var parts=key.split(".");parts[1]=parts[1]?"."+parts[1]:"";if(value==null){var data=this.triggerHandler("getData"+parts[1]+"!",[parts[0]]);if(data==undefined&&this.length)data=jQuery.data(this[0],key);return data==null&&parts[1]?this.data(parts[0]):data;}else
+
-
      return this.trigger("setData"+parts[1]+"!",[parts[0],value]).each(function(){jQuery.data(this,key,value);});},removeData:function(key){return this.each(function(){jQuery.removeData(this,key);});},domManip:function(args,table,reverse,callback){var clone=this.length>1,elems;return this.each(function(){if(!elems){elems=jQuery.clean(args,this.ownerDocument);if
+

Latest revision as of 12:42, 27 October 2011


Team:USTC-Software - 2011.igem.org

1 2 3 4 5 6 7


Lachesis

Team

product

Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year.

Details

Models

product

Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.

Details

Human practice

product

We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic Biology.

Details

Project

image

Our project this year is named Lachesis, which consists of the following

1.Automatic generation of biological reaction network simply from biobrick assemblys.
2.Data exchange,Reaction network visualization.
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.

Details


Sponsers


Vistor



Retrieved from "http://2011.igem.org/Team:USTC-Software"