Team:Cambridge/Experiments/Assembly of Reflectin Constructs

From 2011.igem.org

(Difference between revisions)
(PCR)
(Blanked the page)
 
(160 intermediate revisions not shown)
Line 1: Line 1:
-
{{Template:Team:Cambridge/CAM_2011_TEMPLATE_HEAD}}
 
-
This is a placeholder. We should fill it in.
 
-
 
-
==Construct Design==
 
-
==Primer Design==
 
-
We should mention expected lengths of products here.
 
-
 
-
==Assembly: first attempt==
 
-
===PCR===
 
-
In the first round of PCR, we amplified fragments required for the assembly of GA1, GA2, GA3 and GA4 constructs.
 
-
*We performed PCR using [[Team:Cambridge/Protocols/PCR#Reagents_used_in_PCR_reaction | Phusion Hot Start DNA Polymerase]] in 20 μl reaction volume.
 
-
*The time profile used in the PCR machine was the following:
 
-
{| border="1px" align="center" style="text-align:center;"
 
-
|scope="col" width="100" | '''Hold'''
 
-
|
 
-
|95
 
-
|2min
 
-
|-
 
-
|scope="col" width="100" | '''Cycling'''
 
-
|scope="col" width="100" | ''Denaturing''
 
-
|scope="col" width="50" | 95
 
-
|scope="col" width="50" | 10s
 
-
|-
 
-
|
 
-
|scope="col" width="100" | ''Annealing''
 
-
|scope="col" width="50" | 55
 
-
|scope="col" width="50" | 20s
 
-
|-
 
-
|
 
-
|scope="col" width="100" | ''Elongation''
 
-
|scope="col" width="50" | 72
 
-
|scope="col" width="50" | 150s
 
-
|}
 
-
 
-
*We decided to use 55 degrees annealing temperaure, although the calculated temperature for most primers is 5-10 degrees higher, because of low annealing temperature of the VF2 primer.
 
-
 
-
===Gibson Assembly===
 
-
===Transformation===
 
-
===Results===
 
-
===Diagnostics===
 
-
==Assembly: second attempt==
 
-
===PCR===
 
-
===Gibson Assembly===
 
-
===Transformation===
 
-
===Results===
 
-
==What next?==
 
-
 
-
{{Template:Team:Cambridge/CAM_2011_TEMPLATE_FOOT}}
 

Latest revision as of 14:46, 15 September 2011