Team:USTC-Software

From 2011.igem.org

(Difference between revisions)
(Sponsorship)
 
(125 intermediate revisions not shown)
Line 1: Line 1:
__NOTOC__
__NOTOC__
-
{{:Team:USTC-Software/temp}}
+
{{:Team:USTC-Software/header}}
-
 
+
<html xmlns="http://www.w3.org/1999/xhtml">
-
<html>
+
<head>
<head>
-
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
 
-
 
-
<meta name="author" content="Ao Xu">
 
-
<meta name="revised" content="2011/07/10"/>
 
-
<meta name="description" content="index"/>
 
-
<meta name="keywords" content="USTC_Software iGEM"/>
 
-
 
-
<title>USTC_Software 2011</title>
 
-
 
-
<style type="text/css">
 
-
 
-
body {
 
-
margin: 0;
 
-
padding: 0;
 
-
line-height: 1.5em;
 
-
font-family: Georgia, "Times New Roman", Times, serif;
 
-
font-size: 12px;
 
-
color: #555a4a;
 
-
    background: #a0c73f;
 
-
}
 
-
 
-
a:link, a:visited { color: #0683ab; text-decoration: none; font-weight: normal; }
 
-
a:active, a:hover { color: #0683ab; text-decoration: underline; }
 
-
 
-
.button_01 a {
 
-
display: block;
 
-
width: 102px;
 
-
height: 23px;
 
-
padding: 7px 0 0 0;
 
-
background: url(https://static.igem.org/mediawiki/2011/0/0e/USTC_Software_button.png)  no-repeat;
 
-
color: #333;
 
-
font-size: 12px;
 
-
font-weight: bold;
 
-
text-align: center;
 
-
text-decoration: none;
 
-
}
 
-
 
-
.button_01 a:hover {
 
-
color: #fff;
 
-
    background:url(https://static.igem.org/mediawiki/2011/c/c1/USTC_Software_button_hover.png) no-repeat;
 
-
}
 
-
 
-
p { margin: 0px; padding: 0px; }
 
-
 
-
img { margin: 0px; padding: 0px; border: none; }
 
-
 
-
.cleaner { clear: both; width: 100%; height: 0px; font-size: 0px;  }
 
-
 
-
.cleaner_h30 { clear: both; width:100%; height: 30px; }
 
-
.cleaner_h40 { clear: both; width:100%; height: 40px; }
 
-
 
-
.margin_r10 { margin-right: 10px; }
 
-
 
-
.float_l { float: left; }
 
-
.float_r { float:  right; }
 
-
 
-
#header_wrapper {
 
-
width: 100%;
 
-
height: 265px;
 
-
background: url(https://static.igem.org/mediawiki/2011/0/04/USTC_Software_header.jpg) no-repeat top center;
 
-
}
 
-
 
-
#header {
 
-
position: relative;
 
-
width: 980px;
 
-
height: 265px;
 
-
padding: 0 10px;
 
-
margin: 0 auto;
 
-
background: url(https://static.igem.org/mediawiki/2011/0/04/USTC_Software_header.jpg) no-repeat top center;
 
-
}
 
-
 
-
/* site title */
 
-
 
-
#header  #site_title {
 
-
float: left;
 
-
width: 220px;
 
-
padding: 50px 0 10px 10px;
 
-
}
 
-
 
-
#site_title h1 {
 
-
margin: 0;
 
-
padding: 0;
 
-
}
 
-
 
-
#site_title h1 a {
 
-
margin: 0px;
 
-
padding: 0px;
 
-
font-size: 30px;
 
-
color: #ffffff;
 
-
font-weight: bold;
 
-
text-decoration: none;
 
-
}
 
-
 
-
#site_title h1 a:hover {
 
-
font-weight: bold;
 
-
text-decoration: none;
 
-
}
 
-
 
-
#site_title h1 a span {
 
-
display: block;
 
-
margin-left: 2px;
 
-
font-size: 14px;
 
-
color: #416902;
 
-
font-weight: bold;
 
-
letter-spacing: 2px;
 
-
}
 
-
 
-
/* end of site title */
 
-
 
-
/* menu */
 
-
 
-
#menu {
 
-
float: right;
 
-
padding-top: 70px;
 
-
height: 43px;
 
-
}
 
-
 
-
#menu ul {
 
-
margin: 0;
 
-
padding: 0;
 
-
list-style: none;
 
-
}
 
-
 
-
#menu ul li {
 
-
padding: 0;
 
-
margin: 0;
 
-
display: inline;
 
-
}
 
-
 
-
#menu ul li a {
 
-
float: left;
 
-
display: block;
 
-
height: 35px;
 
-
width: 125px;
 
-
margin: 0;
 
-
padding: 8px 0 0 0;
 
-
text-align: center;
 
-
font-size: 12px;
 
-
text-decoration: none;
 
-
color: #333333;
 
-
font-weight: bold;
 
-
outline: none;
 
-
}
 
-
 
-
#menu li a:hover, #menu li .current {
 
-
color: #333333;
 
-
background: url(https://static.igem.org/mediawiki/2011/6/69/USTC_Software_menu_hover.png) no-repeat top;
 
-
}
 
-
 
-
/* end of menu */
 
-
 
-
/* Search */
 
-
 
-
#header #search_box {
 
-
position: absolute;
 
-
width: 333px;
 
-
height: 53px;
 
-
bottom: 64px;
 
-
right: 15px;
 
-
background: url(https://static.igem.org/mediawiki/2011/1/15/USTC_Software_search.png)
 
-
}
 
-
 
-
#search_box form {
 
-
width: 280px;
 
-
height: 27px;
 
-
margin: 0;
 
-
padding: 25px 0 0 0;
 
-
}
 
-
 
-
#searchfield {
 
-
height: 17px;
 
-
width: 270px;
 
-
padding: 4px 5px 6px 5px;
 
-
color: #fff;
 
-
font-size: 12px;
 
-
font-variant: normal;
 
-
line-height: normal;
 
-
background: none;
 
-
border: none;
 
-
}
 
-
 
-
/* end of search */
 
-
 
-
/*clock_box*/
 
-
#header #clock_box {
 
-
position: absolute;
 
-
width: 333px;
 
-
height: 42px;
 
-
bottom: 15px;
 
-
right: 14px;
 
-
}
 
-
 
-
#clock_box form {
 
-
width: 280px;
 
-
height: 27px;
 
-
margin: 0;
 
-
padding: 25px 0 0 0;
 
-
}
 
-
 
-
/* end of clock_box*/
 
-
 
-
/* back to igem.org*/
 
-
#header #to_org_box {
 
-
position:fixed;
 
-
width: 73px;
 
-
height: 75px;
 
-
bottom: 210px;
 
-
right: 18px;
 
-
}
 
-
 
-
 
-
#to_org_box form {
 
-
width: 280px;
 
-
height: 27px;
 
-
margin: 0;
 
-
padding: 25px 0 0 0;
 
-
}
 
-
/* end of back to igem.org*/
 
-
 
-
 
-
/* content */
 
-
 
-
#content {
 
-
 
-
width:auto;
 
-
        background: #a0c73f;
 
-
}
 
-
 
-
#content_wrapper {
 
-
width: 920px;
 
-
margin: 0 auto;
 
-
padding: 30px 40px;
 
-
background: url(https://static.igem.org/mediawiki/2011/b/bc/USTC_Software_content.jpg) repeat-y;
 
-
}
 
-
 
-
#content_wrapper_bottom {
 
-
width: 1000px;
 
-
height: 15px;
 
-
margin: 0 auto;
 
-
background: url(https://static.igem.org/mediawiki/2011/a/a5/USTC_Software_content_bottom.jpg) no-repeat;
 
-
}
 
-
 
-
 
-
 
-
#content p {
 
-
text-align: justify;
 
-
margin-bottom: 10px;
 
-
}
 
-
 
-
.content_section {
 
-
clear: both;
 
-
width: 100%;
 
-
        background: #fff;
 
-
}
 
-
 
-
#content h2 {
 
-
color: #3a5909;
 
-
font-size: 24px;
 
-
padding: 0 0 60px 20px;
 
-
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
 
-
}
 
-
 
-
.view_box {
 
-
float: left;
 
-
width: 200px;
 
-
padding-bottom: 15px;
 
-
border-bottom: 1px dotted #666;
 
-
margin-bottom: 20px;
 
-
}
 
-
 
-
.fl_image {
 
-
float: left;
 
-
margin: 3px 15px 5px 0;
 
-
}
 
-
 
-
#content .view_box p {
 
-
padding: 0;
 
-
margin: 0 0 5px 0;
 
-
}
 
-
 
-
#content .view_box a {
 
-
color: #000000;
 
-
font-weight: bold;
 
-
}
 
-
 
-
#content .em_text {
 
-
color: #537c11;
 
-
}
 
-
 
-
.price {
 
-
color: #C30;
 
-
font-size: 14px;
 
-
font-weight: bold;
 
-
}
 
-
 
-
.view_box h3 {
 
-
background: #63a103;
 
-
padding: 3px 10px;
 
-
margin: 0 0 10px 0;
 
-
color: #ffffff;
 
-
font-size: 12px;
 
-
}
 
-
 
-
.view_box img {
 
-
width: 190px;
 
-
height: 100px;
 
-
border: 5px solid #e6e0ce;
 
-
margin-bottom: 10px;
 
-
}
 
-
 
-
#sidebar {
 
-
float: right;
 
-
width: 280px;
 
-
padding: 0;
 
-
background: url(images/USTC_Software_sidebar.jpg) repeat-y;
 
-
}
 
-
 
-
#sidebar .sidebar_section {
 
-
margin-bottom: 30px;
 
-
}
 
-
 
-
#sidebar .sidebar_section_content {
 
-
margin:0 0 0 35px;
 
-
}
 
-
 
-
#sidebar h2 {
 
-
color: #3a5909;
 
-
font-size: 24px;
 
-
padding: 0 0 60px 20px;
 
-
background: url(https://static.igem.org/mediawiki/2011/4/4d/USTC_Software_header_bg.png) no-repeat bottom left;
 
-
}
 
-
 
-
#sidebar .categories_list {
 
-
margin: 0;
 
-
padding: 0;
 
-
list-style: none;
 
-
}
 
-
 
-
#sidebar .categories_list li {
 
-
padding: 0;
 
-
margin: 0;
 
-
}
 
-
 
-
.categories_list li a {
 
-
display: block;
 
-
color: #201f1c;
 
-
padding: 5px 0 5px 20px;
 
-
background: url(https://static.igem.org/mediawiki/2011/6/6d/USTC_Software_list.png) center left no-repeat;
 
-
}
 
-
.categories_list li a:hover {
 
-
color: #537c11;
 
-
text-decoration: none;
 
-
}
 
-
 
-
.sidebar_section label {
 
-
display: block;
 
-
margin-bottom: 10px;
 
-
}
 
-
 
-
.sidebar_section #input_field {
 
-
height: 20px;
 
-
width: 233px;
 
-
padding: 0 5px;
 
-
margin-bottom: 10px;
 
-
color: #000000;
 
-
font-size: 12px;
 
-
font-variant: normal;
 
-
line-height: normal;
 
-
}
 
-
 
-
.sidebar_section #submit_btn{
 
-
float: right;
 
-
height: 30px;
 
-
width: 80px;
 
-
margin: 0px;
 
-
padding: 3px 0 15px 0;
 
-
cursor: pointer;
 
-
font-size: 12px;
 
-
text-align: center;
 
-
vertical-align: bottom;
 
-
white-space: pre;
 
-
outline: none;
 
-
}
 
-
 
-
/* end of content */
 
-
 
-
/* mfooter */
 
-
 
-
#mfooter {
 
-
width: 980px;
 
-
margin: 0 auto;
 
-
padding: 30px 10px;
 
-
text-align: center;
 
-
color: #333333;
 
-
        background-color: #a0c73f;
 
-
}
 
-
 
-
#mfooter a {
 
-
color: #000000;
 
-
}
 
-
 
-
#mfooter .mfooter_menu {
 
-
margin: 0 0 10px 0;
 
-
padding: 0px;
 
-
list-style: none;
 
-
}
 
-
 
-
.mfooter_menu li {
 
-
margin: 0px;
 
-
padding: 0 20px;
 
-
display: inline;
 
-
border-right: 1px solid #000000;
 
-
}
 
-
 
-
.mfooter_menu .last_menu {
 
-
border: none;
 
-
}
 
-
 
-
#mfooter #to_top_box {
 
-
position:fixed;
 
-
width: 73px;
 
-
height: 75px;
 
-
bottom: 21px;
 
-
right: 18px;
 
-
}
 
-
 
-
 
-
#to_top_box form {
 
-
width: 280px;
 
-
height: 27px;
 
-
margin: 0;
 
-
padding: 25px 0 0 0;
 
-
}
 
-
 
-
 
-
/* end of mfooter */
 
-
 
-
</style>
 
-
 
-
 
-
 
-
<script language="javascript" type="text/javascript">
 
-
function clearText(field)
 
-
{
 
-
    if (field.defaultValue == field.value) field.value = '';
 
-
    else if (field.value == '') field.value = field.defaultValue;
 
-
}
 
-
function  Clock()
+
<!-- Javascript-->
-
{  var today = new Date();
+
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.3/jquery.min.js"></script>
-
    var day;
+
<script type="text/javascript">
-
    if(today.getDay()==0)  day="Sunday"  
+
$(document).ready(function() {
-
    if(today.getDay()==1)  day="Monday"  
+
//Set Default State of each portfolio piece
-
    if(today.getDay()==2)  day="Tuesday"
+
$(".paging").show();
-
    if(today.getDay()==3)  day="Wednesday"
+
$(".paging a:first").addClass("active");
-
    if(today.getDay()==4)  day="Thursday"  
+
-
    if(today.getDay()==5)  day="Friday"  
+
//Get size of images, how many there are, then determin the size of the image reel.
-
    if(today.getDay()==6)  day="Saturday"
+
var imageWidth = $(".window").width();
-
var sec = today.getSeconds()+1;
+
var imageSum = $(".image_reel img").size();
-
var date =day +", "
+
var imageReelWidth = imageWidth * imageSum;
-
+ today.getFullYear() + "-" + (today.getMonth()+1) + "-" + today.getDate()+
+
-
" " + today.getHours()+":"+today.getMinutes()+":"+sec;
+
//Adjust the image reel to its new size
-
document.getElementById("clock").innerHTML  = date;
+
$(".image_reel").css({'width' : imageReelWidth});
-
}
+
-
</SCRIPT>
+
//Paging + Slider Function
 +
rotate = function(){
 +
var triggerID = $active.attr("rel") - 1; //Get number of times to slide
 +
var image_reelPosition = triggerID * imageWidth; //Determines the distance the image reel needs to slide
 +
$(".paging a").removeClass('active'); //Remove all active class
 +
$active.addClass('active'); //Add active class (the $active is declared in the rotateSwitch function)
 +
 +
//Slider Animation
 +
$(".image_reel").animate({
 +
left: -image_reelPosition
 +
}, 500 );
 +
 +
};
 +
 +
//Rotation + Timing Event
 +
rotateSwitch = function(){
 +
play = setInterval(function(){ //Set timer - this will repeat itself every 3 seconds
 +
$active = $('.paging a.active').next();
 +
if ( $active.length === 0) { //If paging reaches the end...
 +
$active = $('.paging a:first'); //go back to first
 +
}
 +
rotate(); //Trigger the paging and slider function
 +
}, 4000); //Timer speed in milliseconds
 +
};
 +
 +
rotateSwitch(); //Run function on launch
 +
 +
//On Hover
 +
$(".image_reel a").hover(function() {
 +
clearInterval(play); //Stop the rotation
 +
}, function() {
 +
rotateSwitch(); //Resume rotation
 +
});
 +
 +
//On Click
 +
$(".paging a").click(function() {
 +
$active = $(this); //Activate the clicked paging
 +
//Reset Timer
 +
clearInterval(play); //Stop the rotation
 +
rotate(); //Trigger rotation immediately
 +
rotateSwitch(); // Resume rotation
 +
return false; //Prevent browser jump to link anchor
 +
});
 +
 +
});
 +
</script>
</head>
</head>
 +
<body>
 +
<div id="content_wrapper">
-
 
+
<div align="center">
-
<body>
+
<table id="rotator_news">
-
<div id="header_wrapper">
+
<tr>
-
 
+
<td id="window_images">
-
<div id="header">
+
<div class="main_view">
-
   
+
    <div class="window">
-
  <div id="site_title">
+
        <div class="image_reel">
-
            <h1><img src="https://static.igem.org/mediawiki/2011/b/b8/USTC_Software_iGEM_logo.jpg" alt="iGEM" width="128" height="92" />
+
                    <img src="https://static.igem.org/mediawiki/2011/b/bf/USTC_Software_L001.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
-
            </br></br></br>
+
                    <img src="https://static.igem.org/mediawiki/2011/d/da/USTC_Software_L002.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
-
            <span>USTC_Software</span>
+
                    <img src="https://static.igem.org/mediawiki/2011/e/e6/USTC_Software_L003.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
-
            </h1>
+
                    <img src="https://static.igem.org/mediawiki/2011/9/96/USTC_Software_L004.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/6/60/USTC_Software_L005.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/2/22/USTC_Software_L006.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_L007.png" style=" margin-right:0px; width:640px; height:400px" alt="" />            
         </div>
         </div>
-
       
+
    </div>
-
        <div id="menu">
+
    <div class="paging">
-
            <ul>
+
        <a href="#" rel="1">1</a>
-
                <li><a href="#" class="current">Home</a></li>
+
        <a href="#" rel="2">2</a>
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/project" target="_parent">Project</a></li>
+
        <a href="#" rel="3">3</a>
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/model" target="_parent">MoDeL</a></li>
+
        <a href="#" rel="4">4</a>
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/notebook" target="_parent">Notebook</a></li>
+
        <a href="#" rel="5">5</a>
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/human_practice" target="_parent">Human Practice</a></li>
+
        <a href="#" rel="6">6</a>
-
                <li class="last_menu"><a href="https://2011.igem.org/Team:USTC-Software/team" target="_parent">Team</a></li>
+
         <a href="#" rel="7">7</a>
-
            </ul>   
+
-
         </div> <!-- end of menu -->
+
    </div>
-
       
+
</div> <!-- close "main_view" div -->
-
        <div id="search_box">
+
</td>
-
                <form action="#" method="get">
+
</tr>
-
                    <input type="text" value="SEARCH..." name="q" size="10" id="searchfield" title="searchfield" onfocus="clearText(this)" onblur="clearText(this)" />
+
</table>
-
                </form>
+
</div>
-
          </div>    
+
<br/><br/>
-
      <div id="clock_box">      
+
-
        <SCRIPT type=text/javascript>
+
-
              document.write('<FONT  id="clock" color="#FFFFFF> </FONT>');setInterval('Clock()',1000);</SCRIPT>
+
-
      </div>
+
-
   
+
-
    <div class="cleaner"></div>
+
-
    </div> <!-- end of header -->
+
-
</div>  
+
        <h1>Lachesis</h1>
-
<!-- end of header_wrapper -->
+
<!-- Content wrap -->
-
 
+
  <div>
-
<div id="content_wrapper">
+
-
 
+
-
<div id="content">
+
      
      
-
        <div class="content_section">
+
    <div class="content_section">
-
       
+
                 
-
             <h2>Lachesis</h2>
+
             <div class="intro_box margin_r10">
              
              
-
             <div class="view_box margin_r10">
+
            <h3>Team</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/7/78/USTC_Software_image_02.jpg" alt="product" />
 +
               
 +
              <p class="intro">Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year. <div class="button_01">
 +
<a href="https://2011.igem.org/Team:USTC-Software/team">Details</a> </div> </p> </div>           
 +
             <div class="intro_box margin_r10">
 +
            <h3>Models</h3>
 +
                <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="product" />
 +
              <p class="intro">Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.
 +
 
 +
              <div class="button_01">
 +
<a href="https://2011.igem.org/Team:USTC-Software/documents">Details</a> </div> </p> </div>
              
              
-
            <h3>&nbsp;</h3>
+
             <div class="intro_box margin_r10">
-
                <img src="https://static.igem.org/mediawiki/2011/7/78/USTC_Software_image_02.jpg" alt="view" />
+
            <h3>Human practice</h3>
-
              <p class="price">Assembly View</p>
+
                 <img src="https://static.igem.org/mediawiki/2011/3/3c/USTC_Software_image_04.jpg" alt="product" />
-
            </div>
+
-
           
+
-
             <div class="view_box margin_r10">
+
-
            <h3>&nbsp;</h3>
+
-
                <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="view" />
+
-
                   
+
-
                  <p class="price">Network View<a href="#"></a>
+
-
            </p></div>
+
-
           
+
-
           
+
-
            <div class="view_box ">
+
-
            <h3>&nbsp;</h3>
+
-
                 <img src="https://static.igem.org/mediawiki/2011/3/3c/USTC_Software_image_04.jpg" alt="view" />
+
                  
                  
-
               <p class="price">Behavior View<a href="#"></a>
+
               <p class="intro">We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic
-
          </p></div>
+
Biology.<div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/human practice">Details</a> </div> </p> </div>
              
              
             <div class="cleaner"></div>
             <div class="cleaner"></div>
-
           
+
    </div>  
-
            <div class="button_01"><a href="https://2011.igem.org/Team:USTC-Software/project">View All</a></div>
+
-
       
+
-
        </div>  
+
          
          
         <div class="cleaner_h40"></div>
         <div class="cleaner_h40"></div>
-
        <div class="content_section">
+
    <div class="content_section">
          
          
-
         <h2>Project Description</h2>
+
         <h2>Project</h2>
          
          
-
        <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" class="fl_image" />
+
    <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
-
<p><span lang="EN-US" xml:lang="EN-US">USTC 2011 DRY TEAM as a one has worked diligently on designing and implementing a user friendly and interacting-prone software which will get nearer to biology reality and free synthetic biologist from considering unnecessary minutia as well as help both layman and expert draw deep understanding of the mechanism on how the gene circuit run.</span></p>
+
                   
-
<div><span lang="EN-US" xml:lang="EN-US">We offer a visualizing tool which give insight into the dynamics of a biology network. User dominated parameter adjustment process is also provided to assist in getting the required behavior. In order to assess the network&rsquo;s immunology to parameter perturbation, a PCA analysis approach is exploited to depict the structure of a &ldquo;good&rdquo; behaved region.   </span>
+
    <p>
-
      </div>
+
<span lang="EN-US" xml:lang="EN-US">Our project this year is named Lachesis, which consists of the following</span>
-
         </div>
+
<br/>
-
      
+
 +
          <div><span lang="EN-US" xml:lang="EN-US">
 +
1.Automatic generation of biological reaction network simply from biobrick assemblys.<br/>
 +
2.Data exchange,Reaction network visualization.<br/>
 +
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.<br/>
 +
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.<br/>
 +
</p>
 +
</span>
 +
</div>
 +
 
 +
<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
 +
          
 +
    </div>
 +
<br/>
 +
     
 +
<h2>Sponsers</h2>
 +
<table width="917" border="0">
 +
  <tr>
 +
     <td width="180"><img src="https://static.igem.org/mediawiki/2011/5/5b/USTC_Software_IF_LOGO_2.jpg"  width="180" /></td>
 +
    <td width="867">
 +
        <table width="724" height="172" border="0">
 +
          <tr>
 +
            <td width="227"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png"  width="238" height="83"/></td>
 +
            <td width="234"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="238" height="83"/></td>
 +
            <td width="249"><img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="238" height="83"/></td>
 +
          </tr>
 +
          <tr>
 +
            <td height="86"><img src="https://static.igem.org/mediawiki/2011/1/18/USTC_Software_information.png"  width="238" height="83"/></td>
 +
            <td><img src="https://static.igem.org/mediawiki/2011/2/25/USTC_Software_chemistry.jpg"  width="238" height="83"/></td>
 +
            <td><img src="https://static.igem.org/mediawiki/2011/c/cf/USTC_Software_math.jpg"  width="238" height="83"/></td>
 +
          </tr>
 +
        </table>
 +
    </td>
 +
  </tr>
 +
</table>
 +
 
 +
 
 +
 +
 +
-
    </div> <!-- end of content --><!-- end of sidebar -->
+
 
 +
<br/
 +
     
 +
<br/>
 +
 
 +
<h2>Vistor</h2>
 +
 
 +
  <div id="clustrmaps-widget"></div><script type="text/javascript">var _clustrmaps = {'url' : 'https://2011.igem.org/Team:USTC-Software', 'user' : 930921, 'server' : '4', 'id' : 'clustrmaps-widget', 'version' : 1, 'date' : '2011-10-02', 'lang' : 'zh', 'corners' : 'square' };(function (){ var s = document.createElement('script'); s.type = 'text/javascript'; s.async = true; s.src = 'http://www4.clustrmaps.com/counter/map.js'; var x = document.getElementsByTagName('script')[0]; x.parentNode.insertBefore(s, x);})();</script><noscript><a href="http://www4.clustrmaps.com/user/e30e3469"><img src="http://www4.clustrmaps.com/stats/maps-no_clusters/2011.igem.org-Team-USTC-Software-thumb.jpg" alt="Locations of visitors to this page" /></a></noscript>
 +
 
 +
</div>
 +
  <!-- end of content -->
 +
   
 +
  <div class="cleaner"></div>  
      
      
-
  <div class="cleaner"></div>
+
    <br/> <br/>
-
<br/><br/><br/><br/>
+
   
 +
</div>
 +
   
 +
    <div id="content_wrapper_bottom"></div> <!-- end of content_wrapper -->
-
  <h2>Sponsorship</h2>
+
<script type="text/javascript">
 +
  var _gaq = _gaq || [];
 +
  _gaq.push(['_setAccount', 'UA-25857438-1']);
 +
  _gaq.push(['_trackPageview']);
-
   <p align="left"> <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_IF_LOGO.jpg" width="146" height="142"><strong><em>The University of Science and Technology of China Initiative Foundation</em></strong></p>
+
   (function() {
-
  <p align="left"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png" width="364" height="71"><strong><em>Teaching Affair Office, USTC</em></strong></p>
+
    var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
-
  <p align="left"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="365" height="63"><strong><em>
+
    ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
-
School of Life Sciences, USTC</em></strong></p>
+
    var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
-
  <p align="left"> <img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="367" height="68"><strong><em>Graduate School, USTC</em></strong></p>
+
  })();
-
    </div>
+
 
-
  <div id="content_wrapper_bottom"></div> <!-- end of content_wrapper -->
+
</script>
 +
   
<div id="mfooter">
<div id="mfooter">
-
  <ul class="mfooter_menu">
+
  <ul class="mfooter_menu">
-
                 <li><a href="#">Home</a></li>
+
                 <li><a href="#" target="_parent">Home</a></li>
                 <li><a href="https://2011.igem.org/Team:USTC-Software/project" target="_parent">Project</a></li>
                 <li><a href="https://2011.igem.org/Team:USTC-Software/project" target="_parent">Project</a></li>
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/model" target="_parent">MoDeL</a></li>
 
                 <li><a href="https://2011.igem.org/Team:USTC-Software/notebook" target="_parent">Notebook</a></li>
                 <li><a href="https://2011.igem.org/Team:USTC-Software/notebook" target="_parent">Notebook</a></li>
-
                 <li><a href="https://2011.igem.org/Team:USTC-Software/human_practice" target="_parent">Human Practice</a></li>
+
                 <li><a href="https://2011.igem.org/Team:USTC-Software/team" class="current">Team</a></li>
-
                 <li class="last_menu"><a href="https://2011.igem.org/Team:USTC-Software/team" target="_parent">Team</a></li>
+
                <li><a href="https://2011.igem.org/Team:USTC-Software/human practice" target="_parent">Human practice</a></li>
-
            </ul>
+
                 <li class="last_menu"><a href="https://2011.igem.org/Team:USTC-Software/download" target="_parent">Download</a></li>
-
   Welcome to &#160;&#160;<a href="http://en.ustc.edu.cn/" target="_blank">University of Science and Technology of China</a>&#160;!
+
               
-
  <div id="to_org_box"><a href="https://2011.igem.org/Main_Page"><img class="logo" src="https://static.igem.org/mediawiki/2011/8/88/USTC_Software_back_to_igem.png" width="87" height="73"alt="to igem.org"  style="right:auto"/></a></div>
+
  </ul>
-
  <div id="to_top_box"><a href="#top"><img class="logo" src="https://static.igem.org/mediawiki/2011/e/eb/USTC_Software_top_icon.gif" width="73" height="75"alt="go back to top"  style="right:auto"/></a></div>
+
   <b> Welcome to &#160;&#160;<a href="http://en.ustc.edu.cn/" target="_blank">University of Science and Technology of China</a>&#160;! </b>
-
</div>  
+
  <div id="to_org_box"><a href="https://2011.igem.org/Main_Page"><img src="https://static.igem.org/mediawiki/2011/8/88/USTC_Software_back_to_igem.png" width="69" height="70"alt="Go back to igem.org"/></a>
-
    
+
  </div>
-
    
+
 
 +
   <div id="totop_box">
 +
      <a href="#top"><img src="https://static.igem.org/mediawiki/2011/e/eb/USTC_Software_top_icon.gif" width="76" height="72"alt="Go back to Top"/></a>
 +
   </div>
-
<!-- end of mfooter -->
+
</div> <!-- end of mfooter -->
</body>
</body>
</html>
</html>

Latest revision as of 12:42, 27 October 2011


Team:USTC-Software - 2011.igem.org

1 2 3 4 5 6 7


Lachesis

Team

product

Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year.

Models

product

Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.

Human practice

product

We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic Biology.

Project

image

Our project this year is named Lachesis, which consists of the following

1.Automatic generation of biological reaction network simply from biobrick assemblys.
2.Data exchange,Reaction network visualization.
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.


Sponsers



Vistor