Team:BU Wellesley Software

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<title>BU-Wellesley iGEM Team: Welcome</title>
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You are provided with this team page template with which to start the iGEM season. You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2009.igem.org/Help:Template/Examples">HERE</a>.
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You <strong>MUST</strong> have a team description page, a project abstract, a complete project description, a lab notebook, and a safety page.  PLEASE keep all of your pages within your teams namespace. 
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The Boston University/Wellesley College software team is focused on the creation of novel software tools and human-computer interfaces for synthetic biology. Our specific design driver is the exploration of transcription factor interaction in tuberculosis via the creation of custom "plasmid architectures" leveraging the transformative effects of recombinases. The computational foundation of this work is twofold (1) The development of new Clotho Apps for plasmid design, automated assembly, and laboratory management and (2) specific collaborative and interactive software experiences including electronic laboratory notebooks and touch surface design environments.
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<link rel="stylesheet" type="text/css" href="http://cs.wellesley.edu/~hcilab/iGEM_wiki/css/Team.css">
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!align="center"|[[Team:BU_Wellesley_Software|Home]]
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!align="center"|[[Team:BU_Wellesley_Software/Team|Team]]
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!align="center"|[https://igem.org/Team.cgi?year=2011&team_name=BU_Wellesley_Software Official Team Profile]
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!align="center"|[[Team:BU_Wellesley_Software/Project|Project]]
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!align="center"|[[Team:BU_Wellesley_Software/Parts|Parts Submitted to the Registry]]
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!align="center"|[[Team:BU_Wellesley_Software/Modeling|Modeling]]
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!align="center"|[[Team:BU_Wellesley_Software/Notebook|Notebook]]
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!align="center"|[[Team:BU_Wellesley_Software/Safety|Safety]]
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<p  style="text-align:center;"><a href="https://2011.igem.org/Team:BU_Wellesley_Software"><img src="http://cs.wellesley.edu/~hcilab/iGEM_wiki/images/banner.png" width="800px"></a></p>
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!align="center"|[[Team:BU_Wellesley_Software/Attributions|Attributions]]
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Team">Team</a></li>
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<li><a href="#">Project</a>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Project_Overview">Overview</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Clotho">Clotho</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/G-nomeSurferPro">G-nome Surfer Pro</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/OptimusPrimer">Optimus Primer</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Trumpet">Trumpet</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Puppetshow">Puppetshow</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/eLabNotebook">eLabNotebook</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Wet_Lab">Wet Lab</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Downloads_and_Tutorials">Downloads and Tutorials</a></li>
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<li><a href="#">Process</a>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Methodology">Methodology</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Safety">Safety</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Notebook">Notebook</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Outreach">Outreach</a></li>
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<li><a href="#">Additional Info</a>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Acknowledgement">Acknowledgement</a></li>
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<li><a href="https://2011.igem.org/Team:BU_Wellesley_Software/Social">Fun</a></li>
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<h6>Welcome!</h6>
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<div class="intro_greeting">Hi! We are a joint software team between Boston University and Wellesley College. We have created a suite of software tools that run on a desktop interface for individual research and on a tabletop multi-touch interface for collaborative brainstorming and hypothesis forming.
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Check out what we have so far on the site. More content will be coming soon!~<br></div>-->
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<a href="https://2011.igem.org/Team:BU_Wellesley_Software/Notebook">Notebook</a>
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<a href="https://2011.igem.org/Team:BU_Wellesley_Software/Safety">Safety</a>
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<a href="https://2011.igem.org/Team:BU_Wellesley_Software/Acknowledgement">Acknowledgments</a>
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<h3><div class="intro_greeting">Synthetic biology will require a <a href="https://2011.igem.org/Team:BU_Wellesley_Software/Project_Overview"> multidisciplinary, collaborative design environment </a> in order to engineer the complex biological systems of the future. Our team has created a collection of software tools which address specific technical synthetic biology challenges while simultaneously advancing the way in which users interact with computing environments. Our software workflow comprises <a href="https://2011.igem.org/Team:BU_Wellesley_Software/G-nomeSurferPro"> "G-Nome Surfer Pro" </a> for research, <a href="https://2011.igem.org/Team:BU_Wellesley_Software/Trumpet"> "Trumpet" </a> and <a href="https://2011.igem.org/Team:BU_Wellesley_Software/OptimusPrimer"> "Optimus Primer" </a>  for design, and <a href="https://2011.igem.org/Team:BU_Wellesley_Software/Puppetshow"> "Puppetshow" </a>  and <a href="https://2011.igem.org/Team:BU_Wellesley_Software/eLabNotebook"> "eLabNotebook" </a> for the construction of those designs. In addition, we incorporated <a href="https://2011.igem.org/Team:BU_Wellesley_Software/Wet_Lab"> wetlab experimentation </a> into our project to apply these tools to create novel biological systems to investigate Tuberculosis. The combination of human computer interaction, bio-design automation, and experimental design makes our effort unique in the iGEM experience and closes the loop on the design-build-test methodology.
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Latest revision as of 17:19, 27 October 2011

BU-Wellesley iGEM Team: Welcome


Welcome!



Synthetic biology will require a multidisciplinary, collaborative design environment in order to engineer the complex biological systems of the future. Our team has created a collection of software tools which address specific technical synthetic biology challenges while simultaneously advancing the way in which users interact with computing environments. Our software workflow comprises "G-Nome Surfer Pro" for research, "Trumpet" and "Optimus Primer" for design, and "Puppetshow" and "eLabNotebook" for the construction of those designs. In addition, we incorporated wetlab experimentation into our project to apply these tools to create novel biological systems to investigate Tuberculosis. The combination of human computer interaction, bio-design automation, and experimental design makes our effort unique in the iGEM experience and closes the loop on the design-build-test methodology.

Videos







Retrieved from "http://2011.igem.org/Team:BU_Wellesley_Software"