Team:USTC-Software

From 2011.igem.org

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__NOTOC__
__NOTOC__
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{{:Team:USTC-Software/temp}}
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{{:Team:USTC-Software/header}}
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<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<head>
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<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
 
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<title>Team:USTC-Software - 2011.igem.org</title>
 
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<meta name="description" content="home"/>
 
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<meta name="keywords" content="USTC-Software,iGEM,synthetic biology"/>
 
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<meta name="author" content="Ao Xu">
 
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<meta name="copyright" content="Copyright (c) 2011 iGEM USTC Software" />
 
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font-weight: bold;
 
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display: block;
 
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      e.custom(start,val,"");}});return true;});},queue:function(type,fn){if(jQuery.isFunction(type)||(type&&type.constructor==Array)){fn=type;type="fx";}if(!type||(typeof type=="string"&&!fn))return queue(this[0],type);return this.each(function(){if(fn.constructor==Array)queue(this,type,fn);else{queue(this,type).push(fn);if(queue(this,type).length==1)fn.apply(this);}});},stop:function(clearQueue,gotoEnd){var timers=jQuery.timers;if(clearQueue)this.queue([]);this.each(function(){for(var i=timers.length-1;i>=0;i--)if(timers[i].elem==this){if(gotoEnd)timers[i](true);timers.splice(i,1);}});if(!gotoEnd)this.dequeue();return this;}});var queue=function(elem,type,array){if(!elem)return undefined;type=type||"fx";var q=jQuery.data(elem,type+"queue");if(!q||array)q=jQuery.data(elem,type+"queue",array?jQuery.makeArray(array):[]);return q;};jQuery.fn.dequeue=function(type){type=type||"fx";return this.each(function(){var q=queue(this,type);q.shift();if(q.length)q[0].apply(this);});};jQuery.extend({speed:function(speed,easing,fn){var opt=speed&&speed.constructor==Object?speed:{complete:fn||!fn&&easing||jQuery.isFunction(speed)&&speed,duration:speed,easing:fn&&easing||easing&&easing.constructor!=Function&&easing};opt.duration=(opt.duration&&opt.duration.constructor==Number?opt.duration:{slow:600,fast:200}[opt.duration])||400;opt.old=opt.complete;opt.complete=function(){if(opt.queue!==false)jQuery(this).dequeue();if(jQuery.isFunction(opt.old))opt.old.apply(this);};return opt;},easing:{linear:function(p,n,firstNum,diff){return firstNum+diff*p;},swing:function(p,n,firstNum,diff){return((-Math.cos(p*Math.PI)/2)+0.5)*diff+firstNum;}},timers:[],timerId:null,fx:function(elem,options,prop){this.options=options;this.elem=elem;this.prop=prop;if(!options.orig)options.orig={};}});jQuery.fx.prototype={update:function(){if(this.options.step)this.options.step.apply(this.elem,[this.now,this]);(jQuery.fx.step[this.prop]||jQuery.fx.step._default)(this);if(this.prop=="height"||this.prop=="width")this.elem.style.display="block";},cur:function(force){if(this.elem[this.prop]!=null&&this.elem.style[this.prop]==null)return this.elem[this.prop];var r=parseFloat(jQuery.css(this.elem,this.prop,force));return r&&r>-10000?r:parseFloat(jQuery.curCSS(this.elem,this.prop))||0;},custom:function(from,to,unit){this.startTime=(new Date()).getTime();this.start=from;this.end=to;this.unit=unit||this.unit||"px";this.now=this.start;this.pos=this.state=0;this.update();var self=this;function t(gotoEnd){return self.step(gotoEnd);}t.elem=this.elem;jQuery.timers.push(t);if(jQuery.timerId==null){jQuery.timerId=setInterval(function(){var timers=jQuery.timers;for(var i=0;i<timers.length;i++)if(!timers[i]())timers.splice(i--,1);if(!timers.length){clearInterval(jQuery.timerId);jQuery.timerId=null;}},13);}},show:function(){this.options.orig[this.prop]=jQuery.attr(this.elem.style,this.prop);this.options.show=true;this.custom(0,this.cur());if(this.prop=="width"||this.prop=="height")this.elem.style[this.prop]="1px";jQuery(this.elem).show();},hide:function(){this.options.orig[this.prop]=jQuery.attr(this.elem.style,this.prop);this.options.hide=true;this.custom(this.cur(),0);},step:function(gotoEnd){var t=(new Date()).getTime();if(gotoEnd||t>this.options.duration+this.startTime){this.now=this.end;this.pos=this.state=1;this.update();this.options.curAnim[this.prop]=true;var done=true;for(var i in this.options.curAnim)if(this.options.curAnim[i]!==true)done=false;if(done){if(this.options.display!=null){this.elem.style.overflow=this.options.overflow;this.elem.style.display=this.options.display;if(jQuery.css(this.elem,"display")=="none")this.elem.style.display="block";}if(this.options.hide)this.elem.style.display="none";if(this.options.hide||this.options.show)for(var p in this.options.curAnim)jQuery.attr(this.elem.style,p,this.options.orig[p]);}if(done&&jQuery.isFunction(this.options.complete))this.options.complete.apply(this.elem);return false;}else{var n=t-this.startTime;this.state=n/this.options.duration;this.pos=jQuery.easing[this.options.easing||(jQuery.easing.swing?"swing":"linear")](this.state,n,0,1,this.options.duration);this.now=this.start+((this.end-this.start)*this.pos);this.update();}return true;}};jQuery.fx.step={scrollLeft:function(fx){fx.elem.scrollLeft=fx.now;},scrollTop:function(fx){fx.elem.scrollTop=fx.now;},opacity:function(fx){jQuery.attr(fx.elem.style,"opacity",fx.now);},_default:function(fx){fx.elem.style[fx.prop]=fx.now+fx.unit;}};jQuery.fn.offset=function(){var left=0,top=0,elem=this[0],results;if(elem)with(jQuery.browser){var parent=elem.parentNode,offsetChild=elem,offsetParent=elem.offsetParent,doc=elem.ownerDocument,safari2=safari&&parseInt(version)<522&&!/adobeair/i.test(userAgent),fixed=jQuery.css(elem,"position")=="fixed";if(elem.getBoundingClientRect){var box=elem.getBoundingClientRect();add(box.left+Math.max(doc.documentElement.scrollLeft,doc.body.scrollLeft),box.top+Math.max(doc.documentElement.scrollTop,doc.body.scrollTop));add(-doc.documentElement.clientLeft,-doc.documentElement.clientTop);}else{add(elem.offsetLeft,elem.offsetTop);while(offsetParent){add(offsetParent.offsetLeft,offsetParent.offsetTop);if(mozilla&&!/^t(able|d|h)$/i.test(offsetParent.tagName)||safari&&!safari2)border(offsetParent);if(!fixed&&jQuery.css(offsetParent,"position")=="fixed")fixed=true;offsetChild=/^body$/i.test(offsetParent.tagName)?offsetChild:offsetParent;offsetParent=offsetParent.offsetParent;}while(parent&&parent.tagName&&!/^body|html$/i.test(parent.tagName)){if(!/^inline|table.*$/i.test(jQuery.css(parent,"display")))add(-parent.scrollLeft,-parent.scrollTop);if(mozilla&&jQuery.css(parent,"overflow")!="visible")border(parent);parent=parent.parentNode;}if((safari2&&(fixed||jQuery.css(offsetChild,"position")=="absolute"))||(mozilla&&jQuery.css(offsetChild,"position")!="absolute"))add(-doc.body.offsetLeft,-doc.body.offsetTop);if(fixed)add(Math.max(doc.documentElement.scrollLeft,doc.body.scrollLeft),Math.max(doc.documentElement.scrollTop,doc.body.scrollTop));}results={top:top,left:left};}function border(elem){add(jQuery.curCSS(elem,"borderLeftWidth",true),jQuery.curCSS(elem,"borderTopWidth",true));}function add(l,t){left+=parseInt(l)||0;top+=parseInt(t)||0;}return results;};})();
 
-
      </script>
 
-
    <!--end of jquery-1.2.3.min.js-->
 
-
 
-
    <!--jquery.innerfade.js-->
 
-
    <script type="text/javascript">
 
-
       
 
-
        (function($) {
 
-
   
 
-
        $.fn.innerfade = function(options) {
 
-
            return this.each(function() { 
 
-
                $.innerfade(this, options);
 
-
            });
 
-
        };
 
-
   
 
-
        $.innerfade = function(container, options) {
 
-
            var settings = {
 
-
                    'animationtype':    'fade',
 
-
                'speed':            'normal',
 
-
                'type':            'sequence',
 
-
                'timeout':          2000,
 
-
                'containerheight':  'auto',
 
-
                'runningclass':    'innerfade',
 
-
                'children':        null
 
-
            };
 
-
            if (options)
 
-
                $.extend(settings, options);
 
-
            if (settings.children === null)
 
-
                var elements = $(container).children();
 
-
            else
 
-
                var elements = $(container).children(settings.children);
 
-
            if (elements.length > 1) {
 
-
                $(container).css('position', 'relative').css('height', settings.containerheight).addClass(settings.runningclass);
 
-
                for (var i = 0; i < elements.length; i++) {
 
-
                    $(elements[i]).css('z-index', String(elements.length-i)).css('position', 'absolute').hide();
 
-
                };
 
-
                if (settings.type == "sequence") {
 
-
                    setTimeout(function() {
 
-
                        $.innerfade.next(elements, settings, 1, 0);
 
-
                    }, settings.timeout);
 
-
                    $(elements[0]).show();
 
-
                } else if (settings.type == "random") {
 
-
                        var last = Math.floor ( Math.random () * ( elements.length ) );
 
-
                    setTimeout(function() {
 
-
                        do {
 
-
                                                    current = Math.floor ( Math.random ( ) * ( elements.length ) );
 
-
                                            } while (last == current );           
 
-
                                            $.innerfade.next(elements, settings, current, last);
 
-
                    }, settings.timeout);
 
-
                    $(elements[last]).show();
 
-
                            } else if ( settings.type == 'random_start' ) {
 
-
                                    settings.type = 'sequence';
 
-
                                    var current = Math.floor ( Math.random () * ( elements.length ) );
 
-
                                    setTimeout(function(){
 
-
                                        $.innerfade.next(elements, settings, (current + 1) %  elements.length, current);
 
-
                                    }, settings.timeout);
 
-
                                    $(elements[current]).show();
 
-
                            } else {
 
-
                                alert('Innerfade-Type must either be \'sequence\', \'random\' or \'random_start\'');
 
-
                            }
 
-
                    }
 
-
        };
 
-
   
 
-
        $.innerfade.next = function(elements, settings, current, last) {
 
-
            if (settings.animationtype == 'slide') {
 
-
                $(elements[last]).slideUp(settings.speed);
 
-
                $(elements[current]).slideDown(settings.speed);
 
-
            } else if (settings.animationtype == 'fade') {
 
-
                $(elements[last]).fadeOut(settings.speed);
 
-
                $(elements[current]).fadeIn(settings.speed, function() {
 
-
                                removeFilter($(this)[0]);
 
-
                            });
 
-
            } else
 
-
                alert('Innerfade-animationtype must either be \'slide\' or \'fade\'');
 
-
            if (settings.type == "sequence") {
 
-
                if ((current + 1) < elements.length) {
 
-
                    current = current + 1;
 
-
                    last = current - 1;
 
-
                } else {
 
-
                    current = 0;
 
-
                    last = elements.length - 1;
 
-
                }
 
-
            } else if (settings.type == "random") {
 
-
                last = current;
 
-
                while (current == last)
 
-
                    current = Math.floor(Math.random() * elements.length);
 
-
            } else
 
-
                alert('Innerfade-Type must either be \'sequence\', \'random\' or \'random_start\'');
 
-
            setTimeout((function() {
 
-
                $.innerfade.next(elements, settings, current, last);
 
-
            }), settings.timeout);
 
-
        };
 
-
   
 
-
    })(jQuery);
 
-
   
 
-
    // **** remove Opacity-Filter in ie ****
 
-
    function removeFilter(element) {
 
-
        if(element.style.removeAttribute){
 
-
            element.style.removeAttribute('filter');
 
-
        }
 
-
    }
 
-
    </script>
 
-
  <!--end of jquery.innerfade.js-->
 
-
   
 
-
<script type="text/javascript">
 
-
  $(document).ready(
 
-
function(){
 
-
 
-
$('#left_content').innerfade({
 
-
animationtype: 'slide',
 
-
speed: 'slow',
 
-
timeout: 7000,
 
-
type: 'random',
 
-
containerheight: '150px'
 
-
});
 
-
 
-
});
 
-
</script>
 
-
 
-
<!--clock.js-->
 
-
<script language="javascript" type="text/javascript">
 
-
function clearText(field)
 
-
{
 
-
    if (field.defaultValue == field.value) field.value = '';
 
-
    else if (field.value == '') field.value = field.defaultValue;
 
-
}
 
-
 
-
 
-
function  Clock()
 
-
 
-
{  var today = new Date();
 
-
    var day;
 
-
    if(today.getDay()==0)  day="Sunday"
 
-
    if(today.getDay()==1)  day="Monday"
 
-
    if(today.getDay()==2)  day="Tuesday"
 
-
    if(today.getDay()==3)  day="Wednesday"
 
-
    if(today.getDay()==4)  day="Thursday"
 
-
    if(today.getDay()==5)  day="Friday"
 
-
    if(today.getDay()==6)  day="Saturday"
 
-
var sec = today.getSeconds()+1;
 
-
var date =day +", "
 
-
+ today.getFullYear() + "-" + (today.getMonth()+1) + "-" + today.getDate()+
 
-
" " + today.getHours()+":"+today.getMinutes()+":"+sec;
 
-
document.getElementById("clock").innerHTML  = date; 
 
-
}
 
-
</script>
 
-
 
-
<!-- Javascript-->
 
</head>
</head>
<body>
<body>
-
<div id="header_wrapper">
 
-
    <div id="header">
+
<div id="content_wrapper">
-
   
+
 
-
  <div id="site_title">
+
<div align="center">
-
            <h1><img src="https://static.igem.org/mediawiki/2011/b/b8/USTC_Software_iGEM_logo.jpg" alt="iGEM" width="173" height="150" /> </br> </br> USTC-Software </h1>
+
<table id="rotator_news">
 +
<tr>
 +
<td id="window_images">
 +
<div class="main_view">
 +
    <div class="window">
 +
        <div class="image_reel">
 +
                    <img src="https://static.igem.org/mediawiki/2011/b/bf/USTC_Software_L001.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/d/da/USTC_Software_L002.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/e/e6/USTC_Software_L003.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/9/96/USTC_Software_L004.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/6/60/USTC_Software_L005.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/2/22/USTC_Software_L006.png" style=" margin-right:0px; width:650px; height:400px" alt="" />
 +
                    <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_L007.png" style=" margin-right:0px; width:640px; height:400px" alt="" />            
         </div>
         </div>
-
<!-- navigation -->
+
    </div>
-
<ul id="nav">
+
    <div class="paging">
-
<li><a class="on" href="https://2011.igem.org/Team:USTC-Software">Home</a></li>
+
        <a href="#" rel="1">1</a>
-
 
+
        <a href="#" rel="2">2</a>
-
   
+
        <a href="#" rel="3">3</a>
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/project">Project</a>
+
        <a href="#" rel="4">4</a>
-
<ul>
+
        <a href="#" rel="5">5</a>
-
<li><a href="https://2011.igem.org/Team:USTC-Software/documents">Documents</a></li>
+
        <a href="#" rel="6">6</a>
-
<li><a href="https://2011.igem.org/Team:USTC-Software/models">Models</a></li>
+
        <a href="#" rel="7">7</a>
-
<li><a href="https://2011.igem.org/Team:USTC-Software/views">Views</a></li>
+
-
                                <li><a href="https://2011.igem.org/Team:USTC-Software/tech&algo">Technology & Algorithm</a></li>
+
-
                                <li><a href="https://2011.igem.org/Team:USTC-Software/tutorial">Tutorial</a></li>
+
-
</ul>
+
-
</li>
+
-
 
+
-
 
+
-
                <li><a href="https://2011.igem.org/Team:USTC-Software/notebook">Notebook</a>
+
-
                        <ul>
+
-
                                <li><a href="https://2011.igem.org/Team:USTC-Software/judging">Judging Criteria</a></li>  
+
-
                        </ul>
+
-
                </li>
+
-
 
+
-
<li><a href="https://2011.igem.org/Team:USTC-Software/team">Team</a>
+
-
                          <ul>
+
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/members">members</a></li>
+
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/collaboration">collaboration</a></li>
+
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/attribution">attribution & contributions</a></li>
+
-
                            <li><a href="https://2011.igem.org/Team:USTC-Software/acknowledgements">acknowledgements</a></li>
+
-
                          </ul>
+
-
                </li>
+
-
 
+
-
  <li><a href="https://2011.igem.org/Team:USTC-Software/human practice">Human practice</a>            
+
-
  <ul>
+
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/safety">safety</a></li>
+
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/meetup">meetup</a></li>
+
-
  </ul>
+
-
</li> 
+
-
 
+
-
<li><a class="last" href="https://2011.igem.org/Team:USTC-Software/download">Download</a></li>
+
-
           
+
-
</ul>
+
-
<!-- // end of navigation -->
+
-
           
+
-
         
+
-
  <div id="search_box">
+
-
 
+
-
  <form action="http://www.google.com.hk/cse" id="cse-search-box" method="get" target="_blank" >
+
-
    <input type="text" value="SEARCH..." name="q" size="10" id="searchfield" title="searchfield" onFocus="clearText(this)" onBlur="clearText(this)" />
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<div align="center">  <img src="https://static.igem.org/mediawiki/2011/3/31/USTC_Software_001.png" alt="big_img_1" width="555"/> </div>
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        <h3>What is iGEM?</h3>
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<p>The International Genetically Engineered Machine competition (iGEM) is the premiere undergraduate Synthetic Biology competition. Student teams are given a kit of biological parts at the beginning of the summer from the Registry of Standard Biological Parts. Working at their own schools over the summer, they use these parts and new parts of their own design to build biological systems and operate them in living cells. This project design and competition format is an exceptionally motivating and effective teaching method.</p>
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                  <a href="https://igem.org/About">Read more...</a> 
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                <h3>What is Project Lachesis?</h3>
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<p>The project Lachesis aims at providing and integrated, easy-using and extensible CAD environment for the general purpose of Synthetic Biology, it adopts an plug-in based structure.We provide three categories of plug-ins:Document parsers that handles various types of files, such as SBML andMoDeL. Models that each represents a specific kind of synthetic biological
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model. Views that present graphical user interface for users to work with biological models.</p>
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                  <a href="https://2011.igem.org/Team:USTC-Software/project">Read more...</a> 
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                <h3>Where are we from?</h3>
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<p>The University of Science and Technology of China (USTC) is under the jurisdiction of the Chinese Academy of Sciences (CAS).
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                As a key university of the nation, it is noted for its advanced science and high technology programs, unique management studies and well-tailored disciplines in the humanities.
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                On May 11, the Nature Publishing Group released Nature Publishing Index 2010 China, remarking "a dramatic rise in the quality of research being published by China". University of Science and Technology of China is ranked 3rd of TOP 10 Institutions in Index 2010 China.
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         <h1>Lachesis</h1>
         <h1>Lachesis</h1>
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               <p class="intro">Nothing gets done by itself so we formed a group of tireless and diligent students came from different faculties (all parts of USTC) and joined our forces at School of Life Sciences. <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/team">Details</a> </div> </p> </div>
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               <p class="intro">Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year. <div class="button_01">  
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<a href="https://2011.igem.org/Team:USTC-Software/team">Details</a> </div> </p> </div>          
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            <h3>MoDeL</h3>
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            <h3>Models</h3>
                 <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="product" />
                 <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="product" />
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               <p class="intro">Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.
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               <p class="intro">Sorry... <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/model">Details</a> </div> </p> </div>
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<a href="https://2011.igem.org/Team:USTC-Software/documents">Details</a> </div> </p> </div>
              
              
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               <p class="intro">A survey was conducted during the national science week in the school campus of USTC, where students were asked a few basic questions to discover their opinions on synthetic biology.<div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/human practice">Details</a> </div> </p> </div>
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               <p class="intro">We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic
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Biology.<div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/human practice">Details</a> </div> </p> </div>
              
              
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         <h2>Project</h2>
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        <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
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     <p><span lang="EN-US" xml:lang="EN-US">USTC 2011 Dry Team has worked on a software named Lanchesis.</span></p>
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            <div><span lang="EN-US" xml:lang="EN-US">
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<span lang="EN-US" xml:lang="EN-US">Our project this year is named Lachesis, which consists of the following</span>
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<p>It is a software mainly worked on:</p>
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<p>1、Geting the parameter space of a Biology Network which make the Network have the predict behaviour.</p>
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<p>2、Evaluating the sensitivity of a Biology Network using PCA analysis.</p>
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          <div><span lang="EN-US" xml:lang="EN-US">
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<p>3、Making Biology Network easy to see by visualing the network in three windows.Network Window,Reaction Window and Big Window.</p>   </span></div>
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1.Automatic generation of biological reaction network simply from biobrick assemblys.<br/>
 +
2.Data exchange,Reaction network visualization.<br/>
 +
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.<br/>
 +
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.<br/>
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</p>
 +
</span>
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<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
          
          
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            <td width="227"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png"  width="238" height="83"/></td>
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            <td width="234"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="238" height="83"/></td>
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            <td width="249"><img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="238" height="83"/></td>
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            <td height="86"><img src="https://static.igem.org/mediawiki/2011/1/18/USTC_Software_information.png"  width="238" height="83"/></td>
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            <td><img src="https://static.igem.org/mediawiki/2011/2/25/USTC_Software_chemistry.jpg"  width="238" height="83"/></td>
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            <td><img src="https://static.igem.org/mediawiki/2011/c/cf/USTC_Software_math.jpg"  width="238" height="83"/></td>
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  <a href="http://www.ustcif.org"> <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_IF_LOGO.jpg" width="363" height="90"/></a> </td>
 
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  <td width="358"><p align="center"><a href="http://www.ustcif.org"><strong>Initiative Foundation, USTC</strong></a></p></td>
 
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  <td height="102"><img src="https://static.igem.org/mediawiki/2011/2/25/USTC_Software_chemistry.jpg" width="363" height="85" /></td>
 
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  <td><p align="center"><strong>School of Chemistry and Materials Science, USTC</strong></p></td>
 
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      <th width="424" height="56" scope="col"><h2>Vistor</h2></th>
 
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<h2>Vistor</h2>
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   <div id="clustrmaps-widget"></div><script type="text/javascript">var _clustrmaps = {'url' : 'https://2011.igem.org/Team:USTC-Software', 'user' : 930921, 'server' : '4', 'id' : 'clustrmaps-widget', 'version' : 1, 'date' : '2011-10-02', 'lang' : 'zh', 'corners' : 'square' };(function (){ var s = document.createElement('script'); s.type = 'text/javascript'; s.async = true; s.src = 'http://www4.clustrmaps.com/counter/map.js'; var x = document.getElementsByTagName('script')[0]; x.parentNode.insertBefore(s, x);})();</script><noscript><a href="http://www4.clustrmaps.com/user/e30e3469"><img src="http://www4.clustrmaps.com/stats/maps-no_clusters/2011.igem.org-Team-USTC-Software-thumb.jpg" alt="Locations of visitors to this page" /></a></noscript>
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Latest revision as of 12:42, 27 October 2011


Team:USTC-Software - 2011.igem.org

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Lachesis

Team

product

Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year.

Details

Models

product

Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.

Details

Human practice

product

We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic Biology.

Details

Project

image

Our project this year is named Lachesis, which consists of the following

1.Automatic generation of biological reaction network simply from biobrick assemblys.
2.Data exchange,Reaction network visualization.
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.

Details


Sponsers


Vistor



Retrieved from "http://2011.igem.org/Team:USTC-Software"