Team:Bilkent UNAM Turkey/Chlamydomonas reinhardtii
From 2011.igem.org
(Difference between revisions)
(8 intermediate revisions not shown) | |||
Line 1: | Line 1: | ||
<html> | <html> | ||
- | < | + | <script type="text/javascript" src="https://2011.igem.org/Team:Bilkent_UNAM_Turkey/js/dropdowncontent.js?action=raw&ctype=text/css\"></script> |
+ | <link href='https://2011.igem.org/Team:Bilkent_UNAM_Turkey/css/tabbedContent.css?action=raw&ctype=text/css' rel='stylesheet' type='text/css'/> | ||
+ | <script type='text/javascript' src='http://ajax.googleapis.com/ajax/libs/jquery/1.3/jquery.min.js'></script> | ||
+ | <script type="text/javascript" src="https://2011.igem.org/Team:Bilkent_UNAM_Turkey/wordlist.js?action=raw&ctype=text/css\"></script> | ||
+ | |||
+ | <style type="text/css"> | ||
+ | #menubar li a { | ||
+ | color: white; | ||
+ | } | ||
+ | #menubar.right-menu { | ||
+ | margin-top: -15px; | ||
+ | } | ||
+ | #menubar.left-menu { | ||
+ | top:0; | ||
+ | } | ||
+ | .right-menu ul { | ||
+ | border: none; | ||
+ | } | ||
+ | #menubar { | ||
+ | top: 12px; | ||
+ | z-index: 25; | ||
+ | } | ||
+ | .left-menu noprint{ | ||
+ | top:0; | ||
+ | } | ||
+ | #content { | ||
+ | background-color: transparent; | ||
+ | } | ||
+ | .anchor{ | ||
+ | text-decoration: underline | ||
+ | } | ||
+ | .pops{ | ||
+ | position:absolute; | ||
+ | visibility: hidden; | ||
+ | border: 9px solid black; | ||
+ | background: url(https://static.igem.org/mediawiki/2011/5/56/B.jpg) repeat-x left top; | ||
+ | width: 300px; | ||
+ | padding: 8px; | ||
+ | -webkit-border-radius: 8px; | ||
+ | -moz-border-radius: 8px; | ||
+ | border-radius: 8px; | ||
+ | |||
+ | } | ||
+ | body { | ||
+ | width: 100%; | ||
+ | margin: 0 auto; | ||
+ | padding: 0; | ||
+ | font: trebuchet, verdana, arial, times new roman; | ||
+ | } | ||
+ | #home {overflow:auto;} | ||
+ | img[src*="/wiki/skins/common/images/wiki.png"] { | ||
+ | width: 0; | ||
+ | height:0px; | ||
+ | } | ||
+ | |||
+ | .firstHeading { | ||
+ | border: none; | ||
+ | display:none; | ||
+ | } | ||
+ | #catlinks { | ||
+ | display: none; | ||
+ | } | ||
+ | #search-controls { | ||
+ | display: none; | ||
+ | } | ||
+ | #footer-box { | ||
+ | bottom: 3px; | ||
+ | background-color: black; | ||
+ | padding:0px -15px -2px -15px; | ||
+ | z-index:999; | ||
+ | } | ||
+ | html{ | ||
+ | background-color:white; | ||
+ | } | ||
+ | #globalWrapper { | ||
+ | width: 100%; | ||
+ | height: 100%; | ||
+ | padding-right: 0pt; | ||
+ | padding-left: 0pt; | ||
+ | padding-bottom: 10px; | ||
+ | background-color: white; | ||
+ | background: url(https://static.igem.org/mediawiki/2011/5/56/B.jpg) repeat-x left top; | ||
+ | /*-webkit-background-size: cover; | ||
+ | -moz-background-size: cover; | ||
+ | -o-background-size: cover; | ||
+ | background-size: cover; | ||
+ | background-attachment: fixed; | ||
+ | background-position:center top; | ||
+ | background-repeat:no-repeat;*/ | ||
+ | font: 13px Tahoma, Arial, Helvetica, sans-serif; | ||
+ | position: absolute; | ||
+ | overflow: shown; | ||
+ | margin: 0 auto; | ||
+ | color: white; | ||
+ | } | ||
+ | #banner{ | ||
+ | position:fixed; | ||
+ | z-index:24; | ||
+ | } | ||
+ | |||
+ | </style> | ||
+ | |||
+ | <div class='slide_content'> | ||
+ | |||
+ | |||
+ | <!-- all content should be here--> | ||
+ | |||
+ | <img src="https://static.igem.org/mediawiki/2011/1/13/C.Reinhardtii_resmi.PNG" align="center" width="700" height="500"><br><br> | ||
Chlamydomonas reinhardtii is in the Volvocales branch of Chlorophyta phylum. The family name of C. reinhardtii is <br>Chlamydomonadaceae. C. reinhardtii is green algae which has only 10 micrometers. It has two flagella to provide <br>motion. It can sense the light with the eyespot on the main body. This microorganism is commonly used as a model <br>organism in the biology field. Because of its haploidity (it has only 17 chrosomes), any mutations can be observed<br> easily and rapidly without further crosses. The usage area of this alga is focused on the biofuel <br>production.<br> | Chlamydomonas reinhardtii is in the Volvocales branch of Chlorophyta phylum. The family name of C. reinhardtii is <br>Chlamydomonadaceae. C. reinhardtii is green algae which has only 10 micrometers. It has two flagella to provide <br>motion. It can sense the light with the eyespot on the main body. This microorganism is commonly used as a model <br>organism in the biology field. Because of its haploidity (it has only 17 chrosomes), any mutations can be observed<br> easily and rapidly without further crosses. The usage area of this alga is focused on the biofuel <br>production.<br> | ||
- | < | + | <h2>When was the discovery of C. reinhardtii?</h2><br> |
It has isolated in USA, Massachusetts in 1945 by Smith. After its discovery, C. reinhardtii cells enlighten many <br>questions about the motion mechanisms, sensing mechanisms of light, recognition mechanisms of the outer environment, <br>responses to nutritional changes, photosynthesis, etc. The complete nuclear genome sequence of <br>this organism was published in 2007.<br> | It has isolated in USA, Massachusetts in 1945 by Smith. After its discovery, C. reinhardtii cells enlighten many <br>questions about the motion mechanisms, sensing mechanisms of light, recognition mechanisms of the outer environment, <br>responses to nutritional changes, photosynthesis, etc. The complete nuclear genome sequence of <br>this organism was published in 2007.<br> | ||
- | < | + | <h2> How can I reach the genetic structure of this organism?</h2><br> |
The ~15.8 Kb mitochondrial genome is available online at the NCBI database with the database accession number of NC_ 001638. <br>The complete >200 Kb chloroplast genome is available online. Seven cDNA libraries can be found in the web.<br> There are also two databases of >50 000 and >160 000 ESTs available online.*<br> | The ~15.8 Kb mitochondrial genome is available online at the NCBI database with the database accession number of NC_ 001638. <br>The complete >200 Kb chloroplast genome is available online. Seven cDNA libraries can be found in the web.<br> There are also two databases of >50 000 and >160 000 ESTs available online.*<br> | ||
- | < | + | <h2>References:</h2> |
<br>1. Aoyama, H., Kuroiwa, T. and Nakamura, S. 2009. The dynamic behaviour of mitochondria in living zygotes during maturation and meiosis in Chlamydomonas reinhardtii. Eur. J. Phycol. 44: 497 - 507.<br> | <br>1. Aoyama, H., Kuroiwa, T. and Nakamura, S. 2009. The dynamic behaviour of mitochondria in living zygotes during maturation and meiosis in Chlamydomonas reinhardtii. Eur. J. Phycol. 44: 497 - 507.<br> | ||
2. Jamers, A., Lenjou, M., Deraedt, P., van Bockstaele, D., Blust, R. and de Coen, W. 2009. Flow cytometric analysis of the cadmium-exposed green algae Chlamydomonas reinhadtii (Chlorophyceae). Eur. J. Phcol. 44: 54 - 550.<br> | 2. Jamers, A., Lenjou, M., Deraedt, P., van Bockstaele, D., Blust, R. and de Coen, W. 2009. Flow cytometric analysis of the cadmium-exposed green algae Chlamydomonas reinhadtii (Chlorophyceae). Eur. J. Phcol. 44: 54 - 550.<br> | ||
Line 13: | Line 120: | ||
5. Laurent Cournac, Florence Musa, Laetitia Bernarda, Geneviève Guedeneya, Paulette Vignaisb and Gilles Peltie (2002).<br> "Limiting steps of hydrogen production in Chlamydomonas reinhardtii and Synechocystis PCC 6803 as analysed by light-induced<br> gas exchange transients". International Journal of Hydrogen Energy 27 (11/12): 1229–1237. <br> | 5. Laurent Cournac, Florence Musa, Laetitia Bernarda, Geneviève Guedeneya, Paulette Vignaisb and Gilles Peltie (2002).<br> "Limiting steps of hydrogen production in Chlamydomonas reinhardtii and Synechocystis PCC 6803 as analysed by light-induced<br> gas exchange transients". International Journal of Hydrogen Energy 27 (11/12): 1229–1237. <br> | ||
*Taken directly by the wikipedia. | *Taken directly by the wikipedia. | ||
+ | |||
+ | <!-- up to here --> | ||
+ | |||
+ | |||
+ | |||
+ | </div> | ||
+ | <div class='popingProblem' id='popingProblem' >There is a problem with poping up if you see this note.</div> <!-- dont delete this line, it is mandatory for poping up --> | ||
+ | |||
+ | |||
+ | |||
+ | <script type="text/javascript"> | ||
+ | for(var i =0;i<list.length;i++){ | ||
+ | var temp=list[i]; | ||
+ | $("div.slide_content").html($("div.slide_content").html().replace( temp, "<a class=\"anchor\" href=\"https://2011.igem.org/Team:Bilkent_UNAM_Turkey/"+temp+"\" id=\"searchlink"+i+"\" rel=\"subcontent"+i+"\" rev=\"https://2011.igem.org/Team:Bilkent_UNAM_Turkey/pops/"+temp+"?action=raw&ctype=text/css\">"+temp+"</a>" )); | ||
+ | |||
+ | } | ||
+ | |||
+ | |||
+ | //this is for banner | ||
+ | |||
+ | |||
+ | var tr1 = document.createElement('tr'); | ||
+ | var table1 = document.createElement('table'); | ||
+ | table1.setAttribute('id','banner'); | ||
+ | |||
+ | |||
+ | var image1 = document.createElement('img'); | ||
+ | image1.setAttribute('src', 'https://static.igem.org/mediawiki/2011/a/a1/Unam.gif'); | ||
+ | image1.setAttribute('style','border:0;'); | ||
+ | |||
+ | var image2 = document.createElement('img'); | ||
+ | image2.setAttribute('src', 'https://static.igem.org/mediawiki/2011/0/05/Igem.gif'); | ||
+ | image2.setAttribute('style','border:0;'); | ||
+ | |||
+ | var image3 = document.createElement('img'); | ||
+ | image3.setAttribute('src', 'https://static.igem.org/mediawiki/2011/0/06/But.gif'); | ||
+ | image3.setAttribute('style','border:0;'); | ||
+ | |||
+ | var image4 = document.createElement('img'); | ||
+ | image4.setAttribute('src', 'https://static.igem.org/mediawiki/2011/3/32/Bilkent.gif'); | ||
+ | image4.setAttribute('style','border:0;'); | ||
+ | |||
+ | var href1 = document.createElement('a'); | ||
+ | href1.setAttribute('href','http://www.nano.org.tr/index1.html'); | ||
+ | |||
+ | var href2 = document.createElement('a'); | ||
+ | href2.setAttribute('href','https://2011.igem.org/Main_Page'); | ||
+ | |||
+ | var href3 = document.createElement('a'); | ||
+ | href3.setAttribute('href','https://2011.igem.org/Team:Bilkent_UNAM_Turkey'); | ||
+ | |||
+ | var href4 = document.createElement('a'); | ||
+ | href4.setAttribute('href','http://www.bilkent.edu.tr'); | ||
+ | |||
+ | var td1 = document.createElement('td'); | ||
+ | var td2 = document.createElement('td'); | ||
+ | var td3 = document.createElement('td'); | ||
+ | var td4 = document.createElement('td'); | ||
+ | var td5 = document.createElement('td'); | ||
+ | td5.setAttribute('width','110'); | ||
+ | td5.appendChild(document.createElement('g:plusone')); | ||
+ | |||
+ | |||
+ | href1.appendChild(image1); | ||
+ | href2.appendChild(image2); | ||
+ | href3.appendChild(image3); | ||
+ | href4.appendChild(image4); | ||
+ | |||
+ | td1.appendChild(href1); | ||
+ | td2.appendChild(href2); | ||
+ | td3.appendChild(href3); | ||
+ | td4.appendChild(href4); | ||
+ | |||
+ | |||
+ | tr1.appendChild(td1); | ||
+ | tr1.appendChild(td5); | ||
+ | tr1.appendChild(td2); | ||
+ | tr1.appendChild(td3); | ||
+ | tr1.appendChild(td4); | ||
+ | |||
+ | table1.appendChild(tr1); | ||
+ | |||
+ | |||
+ | document.getElementById('top-section').appendChild(table1); | ||
+ | |||
+ | |||
+ | //banner up to here | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | var popdiv=" "; | ||
+ | for(var i =0;i<list.length;i++){ | ||
+ | popdiv +="<DIV id=\"subcontent"+i+"\" class=\"pops\"></DIV>"; | ||
+ | } | ||
+ | $('.popingProblem').after(popdiv) | ||
+ | for(var i=0 ;i<list.length;i++) | ||
+ | dropdowncontent.init(("searchlink"+i), "right-bottom", 500, "mouseover"); | ||
+ | //Call dropdowncontent.init("anchorID", "positionString", glideduration, "revealBehavior") at the end of the page: | ||
+ | $('div').remove('.popingProblem',function(){ | ||
+ | for(var i=0 ;i<list.length;i++) | ||
+ | dropdowncontent.init(("searchlink"+i), "right-bottom", 500, "mouseover"); | ||
+ | //Call dropdowncontent.init("anchorID", "positionString", glideduration, "revealBehavior") at the end of the page: | ||
+ | }); | ||
+ | |||
+ | </script> | ||
+ | |||
+ | </html> |
Latest revision as of 02:36, 22 September 2011
There is a problem with poping up if you see this note.