Team:Potsdam Bioware/Team

From 2011.igem.org

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__NOTOC__
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== Team ==
== Team ==
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[[File:UP_team_roof.jpg|center|500px]]
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[[File:UP_team_amsterdam.jpg|center|500px]]
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[[File:UP_iGEM_team_roof.jpg|center|500px]]
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<table><tr>
<table><tr>
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<td>[[File:UP_Katja.jpg|left|200px]]
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<td width="25%">[[File:UP_Katja.jpg|left|200px]]
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'''Katja Arndt'''<br>
'''Katja Arndt'''<br>
-
Head of group Molecular Biotechnology<br>
 
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Head of group Molecular<br>
 +
Biotechnology<br>
</td>
</td>
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<td>[[File:UP_Kristian.jpg|left|200px]]
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<td width="25%">[[File:UP_Kristian.jpg|left|200px]]
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'''Kristian Müller'''<br>
'''Kristian Müller'''<br>
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Head of group Synthetic Biosystems<br>
 
 +
Head of group Synthetic<br>
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Biosystems<br>
</td>  
</td>  
</tr>
</tr>
</table>
</table>
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<br>
=== Students ===
=== Students ===
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<td>
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'''Nicole Albrecht'''<br>
'''Nicole Albrecht'''<br>
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Major: Biotechnology, Molecularbiology, Biochemistry <br>
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Major: Biotechnology,<br>
 +
Molecularbiology, Biochemistry <br>
Semester: 8th <br>
Semester: 8th <br>
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</td>
</td>
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<td>
<td>
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'''Katharina Berger'''<br>
'''Katharina Berger'''<br>
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Major: Biological Science, Molecularbiology, Biochemistry <br>
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Major: Biological Science,<br>
 +
Molecularbiology, Biochemistry <br>
Semester: 8th<br>
Semester: 8th<br>
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</td>  
</td>  
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<td>
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'''Nadja Bjelopoljak'''<br>
'''Nadja Bjelopoljak'''<br>
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Major: Molecularbiology, Biochemistry
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Major: Biological Science,<br>
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Biochemistry, Molecularbiology <br>
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Semester: 7th <br>
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 +
Semester: 8th <br>
</td>
</td>
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<td>
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'''Nadine Boehmer'''<br>
'''Nadine Boehmer'''<br>
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Major: Biological Science, Biochemistry, Molecularbiology <br>
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Major: Biological Science,<br>
 +
Biochemistry, Molecularbiology <br>
Semester: 8th <br>
Semester: 8th <br>
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</td>
</td>
</tr>
</tr>
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<td>
<td>
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'''Vanessa Boehmer'''<br>
'''Vanessa Boehmer'''<br>
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Major: Biological Science, Molecularbiology <br>
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Major: Biological Science,<br>
 +
Molecularbiology <br>
Semester: 4th<br>
Semester: 4th<br>
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</td>
</td>
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<td>
<td>
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'''Jessica Eger'''<br>
'''Jessica Eger'''<br>
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Major: Biological Science, Molecularbiology, Biochemistry<br>
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Major: Biological Science,<br>
 +
Molecularbiology, Biochemistry<br>
Semester: 8th<br>
Semester: 8th<br>
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</td>
</td>
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<td>
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'''Steffi Sempert'''<br>
'''Steffi Sempert'''<br>
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Major: Molecularbiotechnology, Molecularbiology, Biochemistry <br>
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Major: Molecularbiotechnology,<br>
 +
Molecularbiology, Biochemistry <br>
Semester: 10th<br>
Semester: 10th<br>
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</td>
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<td>
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'''Niels Weisbach'''<br>
'''Niels Weisbach'''<br>
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Major: Biology, Molecularbiology, Biochemistry<br>
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Major: Biology,<br>
 +
Molecularbiology, Biochemistry<br>
Semester: 9th<br>
Semester: 9th<br>
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</td>
</td>
</tr></table>
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=== In vivo Selection ===
=== In vivo Selection ===
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<td>[[File:UP_Sebastian.jpg|left|200px]]
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  <td>
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  [[File:UP_Sebastian.jpg|left|200px]]
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  </td>
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<td>
<td>
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'''Sebastian Hanke'''<br>
'''Sebastian Hanke'''<br>
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Major: Biological Science,
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Major: Biological Science, <br>
Molecularbiology, Biochemistry <br>
Molecularbiology, Biochemistry <br>
Semester: 8th<br>
Semester: 8th<br>
-
 
</td>
</td>
-
 
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  <td>
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<td>[[File:UP_Paul.jpg|left|200px]]
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  [[File:UP_Paul.jpg|left|200px]]
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  </td>
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</td>
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  <td>
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<td>
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'''Paul Kaufmann'''<br>
'''Paul Kaufmann'''<br>
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Major: Biological Science,
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Major: Biological Science,<br>
Molecularbiology, Biochemistry <br>
Molecularbiology, Biochemistry <br>
Semester: 8th<br>
Semester: 8th<br>
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</td>
</td>
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<td>
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'''Sascha Ramm'''<br>
'''Sascha Ramm'''<br>
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Major: Biological Science,
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Major: Biological Science,<br>
Molecularbiology, Biochemistry <br>  
Molecularbiology, Biochemistry <br>  
-
Semester: 8th<br>
 
 +
Semester: 8th<br>
</td>
</td>
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<td>[[File:UP_Stefan.jpg|left|200px]]
<td>[[File:UP_Stefan.jpg|left|200px]]
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</td>
</td>
<td>
<td>
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'''Stefan Wahlefeld'''<br>
'''Stefan Wahlefeld'''<br>
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Major: Biotechnology,
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Major: Biotechnology,<br>
Molecularbiology, Biochemistry <br>
Molecularbiology, Biochemistry <br>
Semester: 8th<br>
Semester: 8th<br>
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</td>
</td>
</tr></table>
</tr></table>
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<br>
 
<br>
<br>
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<td>
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'''Sandrina Heyde'''<br>
'''Sandrina Heyde'''<br>
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Major: Biological Science,
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Major: Biological Science,<br>
Molecularbiology, Biochemistry <br>
Molecularbiology, Biochemistry <br>
Semester: 8th<br>
Semester: 8th<br>
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</td>
</td>
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<td>
<td>
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'''Sabine Meyer'''<br>
'''Sabine Meyer'''<br>
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Major: Biological Science,
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Major: Biological Science,<br>
Molecularbiology, Biochemistry <br>
Molecularbiology, Biochemistry <br>
Semester: 8th<br>
Semester: 8th<br>
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</td>
</td>
</tr></table>
</tr></table>
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 +
<br>
=== Modelling and Software ===
=== Modelling and Software ===
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<td>
<td>
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'''Niklas Laasch'''<br>
'''Niklas Laasch'''<br>
Major: Biological Science,<br>
Major: Biological Science,<br>
-
 
Biochemistry <br>
Biochemistry <br>
Semester: 4th<br>
Semester: 4th<br>
 +
</td>
</td>
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<td>[[File:UP_Oliver.jpg|left|200px]]
<td>[[File:UP_Oliver.jpg|left|200px]]
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</td>
</td>
<td>
<td>
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'''Oliver Zimmer'''<br>
'''Oliver Zimmer'''<br>
Major: Telematics<br>
Major: Telematics<br>
 +
Semester: 4th<br>
 +
<br>
 +
<br>
<br>
<br>
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Semester: 4th<br>
 
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</td>
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</tr></table>
</tr></table>
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== Photo Gallery ==
 
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<!-- Test gallery
 
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<embed type="application/x-shockwave-flash" src="https://picasaweb.google.com/s/c/bin/slideshow.swf" width="400" height="267" flashvars="host=picasaweb.google.com&hl=de&feat=flashalbum&RGB=0x000000&feed=https%3A%2F%2Fpicasaweb.google.com%2Fdata%2Ffeed%2Fapi%2Fuser%2F115227131979594247478%2Falbumid%2F5654206265294232689%3Falt%3Drss%26kind%3Dphoto%26authkey%3DGv1sRgCOabsJmfjOG_MA%26hl%3Dde" pluginspage="http://www.macromedia.com/go/getflashplayer"></embed>
 
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<br>
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== Contribution ==
== Contribution ==
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We are very grateful to Katja and Kristian giving us the opportunity to take part in this competition. Looking back at the last couple of months we have learnt so many different things.<br>  
+
The chance to be part of this competition, of this incredible project incorporating organization and communication skills, teamwork, scientific know-how, time management, budget management, independent working, enthusiasm for synthetic biology would never have been come true without the endorsement on time and valuable advice of our supervisors Prof. Katja Arndt and Dr. Kristian Müller. We cordially owe our deepest gratitude to them.
-
We also would like to thank Prof. Elke Dittmann and her group for providing the Microviridin cluster and for their support and help throughout the whole project.<br>
+
<br><br>We are also extremely thankful to Prof. Elke Dittmann and her team providing us the microviridin gene cluster and their precious advices and support throughout the journey right from the beginning.<!-- Tolkien lässt grüßen-->
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For provision of the TEV protease we thank Gunter Stier, for MS analysis we thank the group of Prof. Steup and Dr. Fettke and for providing the fluorescence microscopy we thank Prof. Walz.<br>
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<br><br>We would like to thank Gunter Stier for the TEV protease.
-
For letting us use the autoclave that many times we thank the groups of Prof. Dittmann, Prof. Ignatova and Prof. Seckler.<br> 
+
<br><br>Among the crews at the University of Potsdam we want to express our gratitude to the group of Prof. Steup and Dr. Fettke for the support with MS analysis and last but not least the team of Prof. Walz giving us the opportunity to use their fluorescence microscope. Additionally, are we very thankful to the groups of Prof. Dittmann, Prof. Ignatova and Prof. Seckler for their greatness to afford us to use their autoclaves. We would also like to thank Prof. Huisinga for the interesting feedback to our model as well as the financial support.
-
Last but not least we would like to thank Tim, Tobi and Sven. We know, it wasn't always easy with us but for your patience and your diffidence we also say a big thank you!<br>
+
 +
Ultimately, we are greatly thankful to Tim, Tobi, Sven, and Vijay, PhD. students of Katja and Kristian, for their encouragement. We know, it wasn't always easy with us, and hereby we formally apologize. For your patience with us throughout the summer, we also want to say a huge Thank you!
 +
<br><br>
 +
The contribution of our team is listed in detail in the lab journal provided.
 +
<br>
-
<!-- *** What falls between these lines is the Alert Box!  You can remove it from your pages once you have read and understood the alert *** -->
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== Contact ==
-
 
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Primary contact for the Potsdam_Bioware iGEM team is Kristian Müller, Synthetic Biosystems Group, University of Potsdam, kristian@syntbio.net, http://www.syntbio.net/km .
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<html>
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<div id="box" style="width: 700px; margin-left: 137px; padding: 5px; border: 3px solid #000; background-color: #fe2b33;">
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<div id="template" style="text-align: center; font-weight: bold; font-size: large; color: #f6f6f6; padding: 5px;">
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This is a template page. READ THESE INSTRUCTIONS.
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<div id="instructions" style="text-align: center; font-weight: normal; font-size: small; color: #f6f6f6; padding: 5px;">
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You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2008.igem.org/Help:Template/Examples">HERE</a>.
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<div id="warning" style="text-align: center; font-weight: bold; font-size: small; color: #f6f6f6; padding: 5px;">
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You <strong>MUST</strong> have a team description page, a project abstract, a complete project description, a lab notebook, and a safety page.  PLEASE keep all of your pages within your teams namespace. 
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<!-- *** End of the alert box *** -->
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{|align="justify"
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|You can write a background of your team here.  Give us a background of your team, the members, etc. Or tell us more about something of your choosing.
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|[[Image:Potsdam_Bioware_logo.png|200px|right|frame]]
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|-
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''Tell us more about your project.  Give us background.  Use this is the abstract of your project.  Be descriptive but concise (1-2 paragraphs)''
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|[[Image:Potsdam_Bioware_team.png|right|frame|Your team picture]]
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|align="center"|[[Team:Potsdam_Bioware | Team Example]]
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|}
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<!--- The Mission, Experiments --->
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{| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center"
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!align="center"|[[Team:Potsdam_Bioware|Home]]
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!align="center"|[[Team:Potsdam_Bioware/Team|Team]]
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!align="center"|[https://igem.org/Team.cgi?year=2010&team_name=Potsdam_Bioware Official Team Profile]
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!align="center"|[[Team:Potsdam_Bioware/Project|Project]]
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!align="center"|[[Team:Potsdam_Bioware/Parts|Parts Submitted to the Registry]]
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!align="center"|[[Team:Potsdam_Bioware/Modeling|Modeling]]
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!align="center"|[[Team:Potsdam_Bioware/Notebook|Notebook]]
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!align="center"|[[Team:Potsdam_Bioware/Safety|Safety]]
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!align="center"|[[Team:Potsdam_Bioware/Attributions|Attributions]]
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|}
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== '''Who we are''' ==
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{|border = "0"
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|-
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|rowspan="3"|
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'''Advisors:'''
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*''' Advisor 1''':    Mentor for all
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*'''Advisor 2''':      Our favorite
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*'''Grad Student 1''':    Our leader 
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'''Undergrads:'''
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*'''Student 1''':    Sleepyhead
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*'''Student 2''':    Math nerd
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*'''Student 3''':  Michael, Is going to save the world
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*'''Student 4''':    Loves iGEM
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*'''Student 5''':  A normal student... or(r) am I?
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*'''Student 6''':  Table football fan
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*'''Student 7''':
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|
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<gallery>
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Image:Potsdam_Bioware_Team_member_1.png|Team member 1
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Image:Potsdam_Bioware_Team_member_2.png|Team member 2
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Image:Potsdam_Bioware_Team_member_3.png|Team member 3
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Image:Potsdam_Bioware_Team_member_4.png|Team member 4
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Image:Potsdam_Bioware_Team_member_5.png|Team member 5
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Image:Potsdam_Bioware_Team_member_6.png|Team member 6
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Image:Potsdam_Bioware_Team_member_7.png|Team member 7
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</gallery>
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|}
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== '''What we did''' ==
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(Provide proper attribution for all work)
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== '''Where we're from''' ==
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Latest revision as of 13:24, 16 November 2011

Team


UP team amsterdam.jpg


UP iGEM team roof.jpg

Members

Instructors

UP Katja.jpg

Katja Arndt

Head of group Molecular
Biotechnology
UP Kristian.jpg

Kristian Müller

Head of group Synthetic
Biosystems


Students

Microviridin

UP Nicole.jpg

Nicole Albrecht

Major: Biotechnology,
Molecularbiology, Biochemistry

Semester: 8th

UP Katharina.jpg

Katharina Berger

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th
UP Nadja.jpg

Nadja Bjelopoljak

Major: Biological Science,
Biochemistry, Molecularbiology

Semester: 8th

UP Nadine.jpg

Nadine Boehmer

Major: Biological Science,
Biochemistry, Molecularbiology

Semester: 8th

UP VanessaB.jpg

Vanessa Boehmer

Major: Biological Science,
Molecularbiology

Semester: 4th
UP Jessica.jpg

Jessica Eger

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th
UP Steffi.jpg

Steffi Sempert

Major: Molecularbiotechnology,
Molecularbiology, Biochemistry

Semester: 10th
UP Niels.jpg

Niels Weisbach

Major: Biology,
Molecularbiology, Biochemistry

Semester: 9th


In vivo Selection

UP Sebastian.jpg

Sebastian Hanke

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th
UP Paul.jpg

Paul Kaufmann

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th
UP SaschaR.jpg

Sascha Ramm

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th
UP Stefan.jpg

Stefan Wahlefeld

Major: Biotechnology,
Molecularbiology, Biochemistry

Semester: 8th


Phage Display

UP Sandrina.jpg

Sandrina Heyde

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th
UP Sabine.jpg

Sabine Meyer

Major: Biological Science,
Molecularbiology, Biochemistry

Semester: 8th


Modelling and Software

UP Niklas.jpg

Niklas Laasch

Major: Biological Science,
Biochemistry

Semester: 4th
UP Oliver.jpg

Oliver Zimmer

Major: Telematics

Semester: 4th
UP TobiasW.jpg

Tobias Wenzel

Major: Physics

Semester: 6th


Contribution

The chance to be part of this competition, of this incredible project incorporating organization and communication skills, teamwork, scientific know-how, time management, budget management, independent working, enthusiasm for synthetic biology would never have been come true without the endorsement on time and valuable advice of our supervisors Prof. Katja Arndt and Dr. Kristian Müller. We cordially owe our deepest gratitude to them.

We are also extremely thankful to Prof. Elke Dittmann and her team providing us the microviridin gene cluster and their precious advices and support throughout the journey right from the beginning.

We would like to thank Gunter Stier for the TEV protease.

Among the crews at the University of Potsdam we want to express our gratitude to the group of Prof. Steup and Dr. Fettke for the support with MS analysis and last but not least the team of Prof. Walz giving us the opportunity to use their fluorescence microscope. Additionally, are we very thankful to the groups of Prof. Dittmann, Prof. Ignatova and Prof. Seckler for their greatness to afford us to use their autoclaves. We would also like to thank Prof. Huisinga for the interesting feedback to our model as well as the financial support.

Ultimately, we are greatly thankful to Tim, Tobi, Sven, and Vijay, PhD. students of Katja and Kristian, for their encouragement. We know, it wasn't always easy with us, and hereby we formally apologize. For your patience with us throughout the summer, we also want to say a huge Thank you!

The contribution of our team is listed in detail in the lab journal provided.


Contact

Primary contact for the Potsdam_Bioware iGEM team is Kristian Müller, Synthetic Biosystems Group, University of Potsdam, kristian@syntbio.net, http://www.syntbio.net/km .

Retrieved from "http://2011.igem.org/Team:Potsdam_Bioware/Team"