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Team:Cornell/Week 8
From 2011.igem.org
(Difference between revisions)
(→Tuesday, July 26) |
(→Tuesday, July 26) |
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Lab work done by: Charlie Chung, Nicholas Kramer & Jim Mathew | Lab work done by: Charlie Chung, Nicholas Kramer & Jim Mathew | ||
| - | '''Objective''': | + | :'''Objective''': |
::To anneal primers containing the Avi-Tag and use as inserts in ligation reactions | ::To anneal primers containing the Avi-Tag and use as inserts in ligation reactions | ||
::To set up various ligation constructs | ::To set up various ligation constructs | ||
| Line 26: | Line 26: | ||
:::50μL Total | :::50μL Total | ||
::*Incubate at 37°C for 30 minutes | ::*Incubate at 37°C for 30 minutes | ||
| - | '''Heat Inactivation of Polynucleotide Kinase''' | + | :'''Heat Inactivation of Polynucleotide Kinase''' |
::*Incubate at 65°C for 20 minutes | ::*Incubate at 65°C for 20 minutes | ||
| - | '''Primer Annealing''' | + | :'''Primer Annealing''' |
::*Incubate forward and reverse primer in a 1:1 ratio at 95°C for 3 minutes | ::*Incubate forward and reverse primer in a 1:1 ratio at 95°C for 3 minutes | ||
::*Let cool to room temperature for ~10 minutes | ::*Let cool to room temperature for ~10 minutes | ||
:::Can also use "Anneal" program on thermocycler | :::Can also use "Anneal" program on thermocycler | ||
| - | '''Ligation''' | + | :'''Ligation''' |
== Wednesday, July 27 == | == Wednesday, July 27 == | ||
Revision as of 07:39, 28 July 2011
Week 1 | Week 2 - 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 | Week 12 | Week 13 | Week 14 | Week 15 | Week 16 | Week 17 | Week 18 | Week 19 | Week 20 | Week 21 |
July 24th - July 30th
Sunday
Monday
Tuesday, July 26
Lab work done by: Claire Paduano & ?
Lab work done by: Charlie Chung, Nicholas Kramer & Jim Mathew
- Objective:
- To anneal primers containing the Avi-Tag and use as inserts in ligation reactions
- To set up various ligation constructs
Phosphorylation of Primers
- 5μL 10x T4 DNA Ligase Buffer
- 3μL Primer
- 1μL T4 Polynucleotide Kinase
- 41μL H2O
- 50μL Total
- Incubate at 37°C for 30 minutes
- Heat Inactivation of Polynucleotide Kinase
- Incubate at 65°C for 20 minutes
- Primer Annealing
- Incubate forward and reverse primer in a 1:1 ratio at 95°C for 3 minutes
- Let cool to room temperature for ~10 minutes
- Can also use "Anneal" program on thermocycler
- Ligation
Wednesday, July 27
Lab work done by: Youjin Cho, Charlie Chung
- De-salted the ligation samples that were set overnight and transformed them into DH5-alpha electrocompetent cells with ampicillin resistance.
