Team:HokkaidoU Japan
From 2011.igem.org
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{{Team:HokkaidoU_Japan/header}} | {{Team:HokkaidoU_Japan/header}} | ||
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<li id="hokkaidou-index-team"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Team">Team | <li id="hokkaidou-index-team"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Team">Team | ||
<span class="hokkaidou-description"> | <span class="hokkaidou-description"> | ||
- | The HokkaidoU_Japan is | + | The HokkaidoU_Japan is formed by 16 students and 3 instructors |
</span> | </span> | ||
</a> | </a> | ||
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<li id="hokkaidou-index-project"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Project">Project | <li id="hokkaidou-index-project"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Project">Project | ||
<span class="hokkaidou-description"> | <span class="hokkaidou-description"> | ||
- | We tried to | + | We tried to further develop E. coli-based protein injection system which we started working on during iGEM 2010 |
</span> | </span> | ||
</a> | </a> | ||
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<li id="hokkaidou-index-notebook"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Notebook">Notebook | <li id="hokkaidou-index-notebook"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Notebook">Notebook | ||
<span class="hokkaidou-description"> | <span class="hokkaidou-description"> | ||
- | The record of our | + | The record of our many failures and a bit of achievement |
</span> | </span> | ||
</a> | </a> | ||
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<li id="hokkaidou-index-safety"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Safety">Safety | <li id="hokkaidou-index-safety"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/Safety">Safety | ||
<span class="hokkaidou-description"> | <span class="hokkaidou-description"> | ||
- | + | Addressing safety concerns | |
</span> | </span> | ||
</a> | </a> | ||
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<li id="hokkaidou-index-humanpractice"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/HumanPractice">Human Practice | <li id="hokkaidou-index-humanpractice"><a href="https://2011.igem.org/Team:HokkaidoU_Japan/HumanPractice">Human Practice | ||
<span class="hokkaidou-description"> | <span class="hokkaidou-description"> | ||
- | + | Science art gallery "BIO ART" | |
</span> | </span> | ||
</a> | </a> | ||
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<div id="hokkaidou-official-team-logo"> | <div id="hokkaidou-official-team-logo"> | ||
<img src="http://igemhokkaidou.files.wordpress.com/2011/04/igem-hokkaidou-logo-transparent.png?w=240&h=240#038;h=240" width="240" height="240" /> | <img src="http://igemhokkaidou.files.wordpress.com/2011/04/igem-hokkaidou-logo-transparent.png?w=240&h=240#038;h=240" width="240" height="240" /> | ||
- | < | + | <span class="hokkaidou-description">iGEM HokkaidoU_Japan Official Team Logo</span> |
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</div> | </div> | ||
<div id="hokkaidou-links"> | <div id="hokkaidou-links"> | ||
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<div style="display: none;" class="preload"><div></div></div> | <div style="display: none;" class="preload"><div></div></div> | ||
<div class="lof-main-outer" style="width:900px; height:340px;"> | <div class="lof-main-outer" style="width:900px; height:340px;"> | ||
- | <ul style="left: - | + | <ul style="left: -4200px; width: 6300px;" class="lof-main-wapper"> |
<li> | <li> | ||
- | <img src="https://static.igem.org/mediawiki/2011/ | + | <img src="https://static.igem.org/mediawiki/2011/6/64/IGEM_HokkaidoU_Index_Slideshow_7.jpg"> |
<div class="lof-main-item-desc"> | <div class="lof-main-item-desc"> | ||
- | <h2> | + | <h2>HokkaidoU_Japan 2011</h2> |
</div> | </div> | ||
</li> | </li> | ||
<li> | <li> | ||
- | <img src="https://static.igem.org/mediawiki/2011/ | + | <img src="https://static.igem.org/mediawiki/2011/8/8a/IGEM_HokkaidoU_Index_Slideshow_1.jpg"> |
+ | <div class="lof-main-item-desc"> | ||
+ | <h2>Welcome to the BIOxART Gallery!!</h2> | ||
+ | </div> | ||
+ | </li> | ||
+ | <li> | ||
+ | <img src="https://static.igem.org/mediawiki/2011/b/b5/IGEM_HokkaidoU_Index_Slideshow_2.jpg"> | ||
<div class="lof-main-item-desc"> | <div class="lof-main-item-desc"> | ||
<h2>Be careful not to contaminate...</h2> | <h2>Be careful not to contaminate...</h2> | ||
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</li> | </li> | ||
<li> | <li> | ||
- | <img src="https://static.igem.org/mediawiki/2011/0/01/IGEM_HokkaidoU_Index_Slideshow_3.jpg | + | <img src="https://static.igem.org/mediawiki/2011/0/01/IGEM_HokkaidoU_Index_Slideshow_3.jpg"> |
<div class="lof-main-item-desc"> | <div class="lof-main-item-desc"> | ||
<h2>Meeting, meeting and MEETING!</h2> | <h2>Meeting, meeting and MEETING!</h2> | ||
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</li> | </li> | ||
<li> | <li> | ||
- | <img src="https://static.igem.org/mediawiki/2011/d/d1/IGEM_HokkaidoU_Index_Slideshow_4.jpg | + | <img src="https://static.igem.org/mediawiki/2011/d/d1/IGEM_HokkaidoU_Index_Slideshow_4.jpg"> |
<div class="lof-main-item-desc"> | <div class="lof-main-item-desc"> | ||
<h2>Dr. <i>E. coli</i> get ready for the job</h2> | <h2>Dr. <i>E. coli</i> get ready for the job</h2> | ||
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</li> | </li> | ||
<li> | <li> | ||
- | <img src="https://static.igem.org/mediawiki/2011/0/06/IGEM_HokkaidoU_Index_Slideshow_5.jpg | + | <img src="https://static.igem.org/mediawiki/2011/0/06/IGEM_HokkaidoU_Index_Slideshow_5.jpg"> |
<div class="lof-main-item-desc"> | <div class="lof-main-item-desc"> | ||
- | <h2> | + | <h2>BIOxART, please feel free to look around</h2> |
</div> | </div> | ||
</li> | </li> | ||
<li> | <li> | ||
- | <img src="https://static.igem.org/mediawiki/2011/7/74/IGEM_HokkaidoU_Index_Slideshow_6.jpg | + | <img src="https://static.igem.org/mediawiki/2011/7/74/IGEM_HokkaidoU_Index_Slideshow_6.jpg"> |
<div class="lof-main-item-desc"> | <div class="lof-main-item-desc"> | ||
<h2>Experiment, experiment and EXPERIMENT!</h2> | <h2>Experiment, experiment and EXPERIMENT!</h2> | ||
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</div> | </div> | ||
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<div style="width: 320px; height: 32px;" class="lof-navigator-outer"> | <div style="width: 320px; height: 32px;" class="lof-navigator-outer"> | ||
- | <ul style="width: | + | <ul style="width: 54px; left: -160px;" class="lof-navigator"> |
+ | <li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/8/81/IGEM_HokkaidoU_Index_Slideshow_Thumb_7.jpg"></li> | ||
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<li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/a/aa/IGEM_HokkaidoU_Index_Slideshow_Thumb_2.jpg"></li> | <li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/a/aa/IGEM_HokkaidoU_Index_Slideshow_Thumb_2.jpg"></li> | ||
<li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/f/fb/IGEM_HokkaidoU_Index_Slideshow_Thumb_3.jpg"></li> | <li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/f/fb/IGEM_HokkaidoU_Index_Slideshow_Thumb_3.jpg"></li> | ||
<li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/e/e2/IGEM_HokkaidoU_Index_Slideshow_Thumb_4.jpg"></li> | <li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/e/e2/IGEM_HokkaidoU_Index_Slideshow_Thumb_4.jpg"></li> | ||
- | <li class=" | + | <li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/9/93/IGEM_HokkaidoU_Index_Slideshow_Thumb_5.jpg"></li> |
<li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/2/21/IGEM_HokkaidoU_Index_Slideshow_Thumb_6.jpg"></li> | <li class="" style="height: 32px; width: 80px;"><img src="https://static.igem.org/mediawiki/2011/2/21/IGEM_HokkaidoU_Index_Slideshow_Thumb_6.jpg"></li> | ||
</ul> | </ul> | ||
</div> | </div> | ||
- | |||
</div> | </div> | ||
</div> | </div> | ||
<h2>Abstract</h2> | <h2>Abstract</h2> | ||
- | <p>We further developed "Dr. E. coli": our project of iGEM 2010. Last year, we showed that Type 3 Secretion System (T3SS) works in E. coli by injecting GFP into RK13 cells. | + | <p>We further developed "Dr. E. coli": our project of iGEM 2010. Last year, we showed that Type 3 Secretion System (T3SS) works in E. coli by injecting GFP into RK13 cells. T3SS is a syringe like organelle found in bacterium such as Salmonella which uses it to inject virulence effector proteins into a target eukaryotic cell. We think this system can be applied to direct reprogramming of somatic cells among many other things.</p> |
- | <p>We tested T3SS performance and tried to make it more convenient. For this purpose we designed a plasmid backbone which can instantly produce ready-to-inject fusion proteins from ordinary biobrick part. Using it, | + | <p>We tested T3SS performance and tried to make it more convenient. For this purpose we designed a plasmid backbone which can instantly produce ready-to-inject fusion proteins from ordinary biobrick part. Using it, we tried to further characterize this system by injecting a library of protein domains.</p> |
<p>In Science Gallery we exhibited awesome photographs related with biotechnology in public. We tried to catch the pedestrians’ interest in current synthetic biology and explore their thoughts.</p> | <p>In Science Gallery we exhibited awesome photographs related with biotechnology in public. We tried to catch the pedestrians’ interest in current synthetic biology and explore their thoughts.</p> | ||
<h2>BioArt</h2> | <h2>BioArt</h2> | ||
- | <iframe id="hokkaidou-bioart-youtube" width="680" height="360" src="http://www.youtube.com/embed/nOP0YIUSj-s" frameborder="0" allowfullscreen | + | <iframe id="hokkaidou-bioart-youtube" width="680" height="360" src="http://www.youtube.com/embed/nOP0YIUSj-s" frameborder="0" allowfullscreen></iframe> |
<style type="text/css"> | <style type="text/css"> | ||
iframe#hokkaidou-bioart-youtube{ margin-bottom: 30px; } | iframe#hokkaidou-bioart-youtube{ margin-bottom: 30px; } | ||
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<p>This gallery is not only for our team.You can also enjoy Bio Art on this Web page. | <p>This gallery is not only for our team.You can also enjoy Bio Art on this Web page. | ||
You can watch more detail in <a href="https://2011.igem.org/Team:HokkaidoU_Japan/HumanPractice">Human Practice</a> page.</p> | You can watch more detail in <a href="https://2011.igem.org/Team:HokkaidoU_Japan/HumanPractice">Human Practice</a> page.</p> | ||
- | + | ||
</html> | </html> | ||
+ | ==Acknowledgements== | ||
+ | ===Laboratory and Personnel=== | ||
+ | * Environmental Molecular Biology, Graduate School of Environmental Earth Science, Hokkaido University | ||
+ | :: Ken-ichi Yamazaki and Members of Yamazaki Lab | ||
+ | * Molecular Biology, Institute for Genetic Medicine, Hokkaido University | ||
+ | :: Hisatoshi Shida | ||
+ | * Nikon Imaging Center | ||
+ | :: Takeharu Nagai, Kenta Saito, Masahiro Nakano, Kentarou Kobayashi, Hiroshi Nishino | ||
+ | * Laboratory of Molecular and Cellular Biophysics, Hokkaido University | ||
+ | :: Tomomi Nemoto, Terumasa Hibi, Ryosuke Kawakami | ||
+ | * Muroran Marine Station Field Science Center for Northern Biosphere, Hokkaido University | ||
+ | :: Taizo Motomura | ||
+ | * Laboratory of X-ray structural biology, Department of Advanced Transdisciplinary Science, faculty of Advanced Life Science | ||
+ | ::Isao Tanaka | ||
+ | * Research Institute for Electronic Science, Hokkaido University | ||
+ | |||
+ | ===Academic Institutions=== | ||
+ | * Salmonella Genetic Stock Center/University of Calgary | ||
+ | * Graduate School of Environmental Earth Science | ||
+ | * Department of biological science/School of Sciense | ||
+ | * Institute for Genetic Medicine | ||
+ | |||
+ | ===Companies=== | ||
+ | * Primary Cell Co., Ltd. | ||
+ | * ECONiXE Co., Ltd. | ||
+ | * Hokuto Kohki Engineering Co,. Ltd. | ||
+ | * COSMO BIO Co., Ltd. | ||
+ | * AMINO UP CHEMICAL Co., Ltd. | ||
+ | * Mendel Workshop Co., Ltd. | ||
+ | |||
+ | </div> | ||
{{Team:HokkaidoU_Japan/footer}} | {{Team:HokkaidoU_Japan/footer}} |
Latest revision as of 09:59, 15 December 2011
HokkaidoU Japan
iGEM 2011 Team of Hokkaido University
Contents |
Abstract
We further developed "Dr. E. coli": our project of iGEM 2010. Last year, we showed that Type 3 Secretion System (T3SS) works in E. coli by injecting GFP into RK13 cells. T3SS is a syringe like organelle found in bacterium such as Salmonella which uses it to inject virulence effector proteins into a target eukaryotic cell. We think this system can be applied to direct reprogramming of somatic cells among many other things.
We tested T3SS performance and tried to make it more convenient. For this purpose we designed a plasmid backbone which can instantly produce ready-to-inject fusion proteins from ordinary biobrick part. Using it, we tried to further characterize this system by injecting a library of protein domains.
In Science Gallery we exhibited awesome photographs related with biotechnology in public. We tried to catch the pedestrians’ interest in current synthetic biology and explore their thoughts.
BioArt
We held the new type science art gallery "Bio Art" at the center of Sapporo city.
This gallery is not only for our team.You can also enjoy Bio Art on this Web page. You can watch more detail in Human Practice page.
Acknowledgements
Laboratory and Personnel
- Environmental Molecular Biology, Graduate School of Environmental Earth Science, Hokkaido University
- Ken-ichi Yamazaki and Members of Yamazaki Lab
- Molecular Biology, Institute for Genetic Medicine, Hokkaido University
- Hisatoshi Shida
- Nikon Imaging Center
- Takeharu Nagai, Kenta Saito, Masahiro Nakano, Kentarou Kobayashi, Hiroshi Nishino
- Laboratory of Molecular and Cellular Biophysics, Hokkaido University
- Tomomi Nemoto, Terumasa Hibi, Ryosuke Kawakami
- Muroran Marine Station Field Science Center for Northern Biosphere, Hokkaido University
- Taizo Motomura
- Laboratory of X-ray structural biology, Department of Advanced Transdisciplinary Science, faculty of Advanced Life Science
- Isao Tanaka
- Research Institute for Electronic Science, Hokkaido University
Academic Institutions
- Salmonella Genetic Stock Center/University of Calgary
- Graduate School of Environmental Earth Science
- Department of biological science/School of Sciense
- Institute for Genetic Medicine
Companies
- Primary Cell Co., Ltd.
- ECONiXE Co., Ltd.
- Hokuto Kohki Engineering Co,. Ltd.
- COSMO BIO Co., Ltd.
- AMINO UP CHEMICAL Co., Ltd.
- Mendel Workshop Co., Ltd.