Team:OUC-China/Result/date
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- | <li><a href="/Team:OUC-China/Result/ | + | <li><a href="/Team:OUC-China/Result/Notebook">Notebook - Summary</a></li> |
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<li><a href="/Team:OUC-China/Result/week1">Week 1</a></li> | <li><a href="/Team:OUC-China/Result/week1">Week 1</a></li> | ||
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<li><a href="/Team:OUC-China/Result/date">Data</a></li> | <li><a href="/Team:OUC-China/Result/date">Data</a></li> | ||
+ | <li><a href="/Team:OUC-China/Result/Puf2011d">Previous Biobricks</a></li> | ||
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</div> | </div> | ||
- | + | <div><p>We've also shared this Data document on Google Docs, <a style="color:green;" href="https://docs.google.com/document/d/106boR2c3uczJ1yOioUxMxTKYvC9hDI8_1T_9dwrY0QA/edit" target="_blank">see here.</a></p></div> | |
- | </ | + | <div><p class="c2 c22"><span></span></p></div><h1 class="c4"><a name="h.u9me3k1zft2"></a><span>7.21</span></h1><h3 class="c4"><a name="h.5c3btudrepao"></a><span>I Prepare medium</span></h3><h3 class="c4"><a name="h.5c3btudrepao"></a><span>1.soc medium</span></h3><h3 class="c4"><a name="h.5c3btudrepao"></a><span>2.LB medium</span></h3><h3 class="c4"><a name="h.5c3btudrepao"></a><span>3.LBliquid medium</span></h3><h3 class="c4"><a name="h.5c3btudrepao"></a><span>II transform 2011 parts –OUC Order 1 to 3</span></h3><h3 class="c4"><a name="h.5c3btudrepao"></a><span>III pick up a tested single colony</span></h3><p class="c2"><span></span></p><h1 class="c4"><a name="h.tutvix3ykf10"></a><span>7.22</span></h1><h3 class="c4"><a name="h.g2bioc2tx8l7"></a><span>1.Extract plasmid of the practicing part</span></h3><h3 class="c4"><a name="h.ufnfesh49wep"></a><span>2. Measure density using distilled water as comparison</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c40"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>A260/A280</span></p></td><td class="c13"><p class="c4"><span>A260/A230</span></p></td><td class="c13"><p class="c4"><span>density(ng/ul)</span></p></td></tr><tr class="c40"><td class="c5"><p class="c4"><span>1</span></p></td><td class="c5"><p class="c4"><span>1.892</span></p></td><td class="c13"><p class="c4"><span>2.115</span></p></td><td class="c13"><p class="c4"><span>0.035</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>2</span></p></td><td class="c5"><p class="c4"><span>1.841</span></p></td><td class="c13"><p class="c4"><span>1.227</span></p></td><td class="c13"><p class="c4"><span>0.0405</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>3</span></p></td><td class="c5"><p class="c4"><span>2.299</span></p></td><td class="c13"><p class="c4"><span>4.054</span></p></td><td class="c13"><p class="c4"><span>0.030</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.9fgyukkhs06"></a><span>3. Digestion for 3 hours</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c42"><p class="c2"><span></span></p><p class="c2"><span></span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>2</span></p></td><td class="c32"><p class="c4"><span>3</span></p></td><td class="c32"><p class="c4"><span>4(Single enzyme cut)</span></p><p class="c2"><span></span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>DNA(ul)</span></p></td><td class="c32"><p class="c4"><span>15</span></p></td><td class="c32"><p class="c4"><span>15</span></p></td><td class="c32"><p class="c4"><span>15</span></p></td><td class="c32"><p class="c4"><span>15</span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>Buffer2(ul)</span></p></td><td class="c32"><p class="c4"><span>5</span></p></td><td class="c32"><p class="c4"><span>5</span></p></td><td class="c32"><p class="c4"><span>5</span></p></td><td class="c32"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>Bsa(ul)</span></p></td><td class="c32"><p class="c4"><span>0.5</span></p></td><td class="c32"><p class="c4"><span>0.5</span></p></td><td class="c32"><p class="c4"><span>0.5</span></p></td><td class="c32"><p class="c4"><span>-----</span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>Double-distilled water(ul)</span></p></td><td class="c32"><p class="c4"><span>27.5</span></p></td><td class="c32"><p class="c4"><span>27.5</span></p></td><td class="c32"><p class="c4"><span>27.5</span></p></td><td class="c32"><p class="c4"><span>29</span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>EcoR I(ul)</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>Pst I(ul)</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>1</span></p></td><td class="c32"><p class="c4"><span>-------</span></p></td></tr><tr class="c12"><td class="c42"><p class="c4"><span>Time(h)</span></p></td><td class="c32"><p class="c4"><span>3</span></p></td><td class="c32"><p class="c4"><span>3</span></p></td><td class="c32"><p class="c4"><span>3</span></p></td><td class="c32"><p class="c4"><span>3</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.1ruf9mihj3z2"></a><span>4.check by Electrophoresis</span></h3><p class="c4"><span class="c27">1、2、3:double enzyme,4、5、6:Single enzyme ,7:plasmid</span></p><p class="c4"><span class="c27">5.transform 7new parts(number:4-10)</span></p><p class="c4"><span class="c27">6.culture bacteria on LB medium</span></p><p class="c4"><span class="c27">7.culture 3 new parts in Shaker</span></p><h1 class="c4"><a name="h.90bsowdqfwvf"></a><span>7.24</span></h1><h3 class="c4"><a name="h.fllej6viiwbz"></a><span>1. Presrvation species of parts No. ,4,5,6,7,8,9,10</span></h3><h3 class="c4"><a name="h.fllej6viiwbz"></a><span>2. Extract plasmid of 4,5,6,7,8,9,10</span></h3><h3 class="c4"><a name="h.fllej6viiwbz"></a><span>3.check through double enzyme Digestion</span></h3><h3 class="c4 c29"><a name="h.fllej6viiwbz"></a></h3><h1 class="c4"><a name="h.60w0ipkcfych"></a><span>7.25</span></h1><h3 class="c4"><a name="h.r7rj1zpq27u6"></a><span>1. Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c37"><p class="c4"><span>5</span></p></td><td class="c37"><p class="c4"><span>0.020µg/µl</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>4</span></p></td><td class="c37"><p class="c4"><span>0.012µg/µl</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>6</span></p></td><td class="c37"><p class="c4"><span>0.020µg/µl</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>2</span></p></td><td class="c37"><p class="c4"><span>0.015µg/µl</span></p></td></tr></tbody></table><p class="c2"><span></span></p><p class="c2"><span></span></p><h3 class="c4"><a name="h.kj1r3fgjzq4o"></a><span>2. Digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>DNA</span></p></td><td class="c1"><p class="c4"><span>25</span></p></td><td class="c1"><p class="c4"><span>30</span></p></td><td class="c1"><p class="c4"><span>25</span></p></td><td class="c1"><p class="c4"><span>25</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Buffer2</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>BSA</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>H2O</span></p></td><td class="c1"><p class="c4"><span>17.5</span></p></td><td class="c1"><p class="c4"><span>12.5</span></p></td><td class="c1"><p class="c4"><span>17.5</span></p></td><td class="c1"><p class="c4"><span>17.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>enzyme1</span></p></td><td class="c1"><p class="c4"><span>EcoRⅠ1µl</span></p></td><td class="c1"><p class="c4"><span>EcoRⅠ1µl</span></p></td><td class="c1"><p class="c4"><span>SpeⅠ1µl</span></p></td><td class="c1"><p class="c4"><span>XbaⅠ1µl</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Enzyme2</span></p></td><td class="c1"><p class="c4"><span>SpeⅠ1µl</span></p></td><td class="c1"><p class="c4"><span>XbaⅠ1µl</span></p></td><td class="c1"><p class="c4"><span>PstⅠ1µl</span></p></td><td class="c1"><p class="c4"><span>PstⅠ1µl</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.z9jf6h5q8571"></a><span>3.check by Electrophoresis</span></h3><h3 class="c4"><a name="h.z9jf6h5q8571"></a><span>4.gel extraction</span></h3><h3 class="c4"><a name="h.3xuy6enwwjqe"></a><span>5.measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>OUC-order</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Density ug/µl</span></p></td><td class="c1"><p class="c4"><span>0.016</span></p></td><td class="c1"><p class="c4"><span>0.021</span></p></td><td class="c1"><p class="c4"><span>0.027</span></p></td><td class="c1"><p class="c4"><span>0.028</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.7t6dpq2z3uet"></a><span>6. Ligate overnight</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Parts</span></p></td><td class="c9"><p class="c4"><span>2µl 5+3µl 4</span></p></td><td class="c9"><p class="c4"><span>3µl 2+3µl 6</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer</span></p></td><td class="c9"><p class="c4"><span>2µl</span></p></td><td class="c9"><p class="c4"><span>2µl</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>enzyme</span></p></td><td class="c9"><p class="c4"><span>1µl</span></p></td><td class="c9"><p class="c4"><span>1µl</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DdH2O</span></p></td><td class="c9"><p class="c4"><span>2µl</span></p></td><td class="c9"><p class="c4"><span>1µl</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.v8m6lz1ufk1s"></a><span>7.28</span></h1><h3 class="c4"><a name="h.3yqybicztq70"></a><span>Repeat the ligation expriments of 7.25</span></h3><h1 class="c4"><a name="h.iezpb3pvvzxm"></a><span>7.29</span></h1><h3 class="c4"><a name="h.2tk3jc38wcfz"></a><span>Extract plasmids of parts No. 11,12,13,14</span></h3><h1 class="c4"><a name="h.igfocjjyx4ru"></a><span>7.30</span></h1><h3 class="c4"><a name="h.i6nzwpfyvvjl"></a><span>Medium has antibiotic resistance problem, re-transform 11\12\13\14</span></h3><h1 class="c4"><a name="h.ug8l8jxvj3n1"></a><span>7.31</span></h1><h3 class="c4"><a name="h.2qt7wbgkde7s"></a><span>1.cultrue bacteria of 11,12,13,14 in LB liquid medium</span></h3><h3 class="c4"><a name="h.2qt7wbgkde7s"></a><span>2. Extract plasmid of 15,16,17,18,19,20,21,22</span></h3><h3 class="c4"><a name="h.2qt7wbgkde7s"></a><span>3. Optimization the Steps of Extracting plasmid</span></h3><h3 class="c4"><a name="h.2qt7wbgkde7s"></a><span>4.Chloramphericol preparing</span></h3><h3 class="c4"><a name="h.2qt7wbgkde7s"></a><span>5. NaAC’s DNA </span><span><a class="c45" href="http:///t">concentration</a></span></h3><p class="c2"><span><a class="c45" href="http:///t"></a></span></p><h1 class="c4"><a name="h.tfyl7y9pxkmo"></a><span>8.1 </span></h1><h3 class="c4"><a name="h.bx2edw2baey7"></a><span>1. Extract plasmid of 11-14 and Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>ng/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>11</span></p></td><td class="c9"><p class="c4"><span>12.7</span></p></td><td class="c9"><p class="c4"><span>1.917</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>12</span></p></td><td class="c9"><p class="c4"><span>10.3</span></p></td><td class="c9"><p class="c4"><span>1.981</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>13</span></p></td><td class="c9"><p class="c4"><span>35.5</span></p></td><td class="c9"><p class="c4"><span>1.919</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>14</span></p></td><td class="c9"><p class="c4"><span>15.7</span></p></td><td class="c9"><p class="c4"><span>1.975</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.hvilmpnl4guw"></a><span>2. Extract plasmid of No.5,4,6,2,15-20 parts</span></h3><h3 class="c4"><a name="h.hvilmpnl4guw"></a><span>3.culture the colony of GFP on LB medium</span></h3><h1 class="c4"><a name="h.9dt18ihmbdii"></a><span>8.2</span></h1><h3 class="c4"><a name="h.e15sf2yo8hvd"></a><span>Measure density of 15-22,2,4,5,6</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>Parts</span></p></td><td class="c9"><p class="c4"><span>µg/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>0.038</span></p></td><td class="c9"><p class="c4"><span>1.875</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>4</span></p></td><td class="c9"><p class="c4"><span>0.019</span></p></td><td class="c9"><p class="c4"><span>1.298</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>5</span></p></td><td class="c9"><p class="c4"><span>0.022</span></p></td><td class="c9"><p class="c4"><span>1.538</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>6</span></p></td><td class="c9"><p class="c4"><span>0.020</span></p></td><td class="c9"><p class="c4"><span>1.702</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>15</span></p></td><td class="c9"><p class="c4"><span>0.012</span></p></td><td class="c9"><p class="c4"><span>1.237</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>16</span></p></td><td class="c9"><p class="c4"><span>0.024</span></p></td><td class="c9"><p class="c4"><span>1.649</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>17</span></p></td><td class="c9"><p class="c4"><span>0.018</span></p></td><td class="c9"><p class="c4"><span>1.731</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18</span></p></td><td class="c9"><p class="c4"><span>0.015</span></p></td><td class="c9"><p class="c4"><span>1.470</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>21</span></p></td><td class="c9"><p class="c4"><span>0.017</span></p></td><td class="c9"><p class="c4"><span>1.538</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.i1axlh3f3s5k"></a><span>8.3</span></h1><h3 class="c4"><a name="h.q8al8jclaxs9"></a><span>1. Concentrate plasmid using alcohol and NaAC</span></h3><h3 class="c4"><a name="h.q8al8jclaxs9"></a><span>2. Measure density after concentrating</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>ng/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>103</span></p></td><td class="c9"><p class="c4"><span>1.807</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>4</span></p></td><td class="c9"><p class="c4"><span>33</span></p></td><td class="c9"><p class="c4"><span>1.811</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>5</span></p></td><td class="c9"><p class="c4"><span>56</span></p></td><td class="c9"><p class="c4"><span>1.836</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>6</span></p></td><td class="c9"><p class="c4"><span>41</span></p></td><td class="c9"><p class="c4"><span>1.745</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.s9gc90q0jnk2"></a><span>8.4</span></h1><h3 class="c4"><a name="h.w2vf5a97h188"></a><span>Digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>Double enzymes</span></p></td><td class="c1"><p><span></span></p></td><td class="c1"><p class="c4"><span>Single enzyme</span></p></td><td class="c1"><p><span></span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Parts</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>6</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>DNA</span></p></td><td class="c1"><p class="c4"><span>25</span></p></td><td class="c1"><p class="c4"><span>13</span></p></td><td class="c1"><p class="c4"><span>27</span></p></td><td class="c1"><p class="c4"><span>25</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Buffer</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>BSA</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>ddH2O</span></p></td><td class="c1"><p class="c4"><span>16.5</span></p></td><td class="c1"><p class="c4"><span>28.5</span></p></td><td class="c1"><p class="c4"><span>16.5</span></p></td><td class="c1"><p class="c4"><span>18.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>enzyme</span></p></td><td class="c1"><p class="c4"><span>EcoRⅠ 1.5</span></p></td><td class="c1"><p class="c4"><span>XbaⅠ1.5</span></p></td><td class="c1"><p class="c4"><span>XbaⅠ1</span></p></td><td class="c1"><p class="c4"><span>SpeⅠ1</span></p></td></tr><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>SpeⅠ1.5</span></p></td><td class="c1"><p class="c4"><span>PstⅠ1.5</span></p></td><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c2"><span></span></p></td></tr></tbody></table><p class="c2"><span></span></p><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>Parts</span></p></td><td class="c9"><p class="c4"><span>4</span></p></td><td class="c9"><p class="c4"><span>6</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>28.5</span></p></td><td class="c9"><p class="c4"><span>30</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer</span></p></td><td class="c9"><p class="c4"><span>EcoRⅠbuffer 5</span></p></td><td class="c9"><p class="c4"><span>Buffer3 5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>BSA</span></p></td><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>15.5</span></p></td><td class="c9"><p class="c4"><span>13.5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>enzyme</span></p></td><td class="c9"><p class="c4"><span>EcoRⅠ1</span></p></td><td class="c9"><p class="c4"><span>PstⅠ1</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.hhwrahhkoe43"></a><span>8.5</span></h1><h3 class="c4"><a name="h.t0nrpb7qcvp0"></a><span>1. Begin device 2</span></h3><h3 class="c4"><a name="h.t0nrpb7qcvp0"></a><span>2. Design experimental procedures: </span></h3><h3 class="c4"><a name="h.t0nrpb7qcvp0"></a><span>3. First construction with parts of device 2</span></h3><p class="c2"><span class="c44"></span></p><h1 class="c4"><a name="h.tzzxaggc2un4"></a><span>8.6</span></h1><h3 class="c4"><a name="h.yzze9tnt5vuy"></a><span>2+6 successfully ligate</span></h3><h3 class="c4"><a name="h.8c49qiwztmgq"></a><span>Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>Parts</span></p></td><td class="c9"><p class="c4"><span>µg/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>3</span></p></td><td class="c9"><p class="c4"><span>0.085</span></p></td><td class="c9"><p class="c4"><span>1.910</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>16</span></p></td><td class="c9"><p class="c4"><span>0.119</span></p></td><td class="c9"><p class="c4"><span>1.867</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18</span></p></td><td class="c9"><p class="c4"><span>0.019</span></p></td><td class="c9"><p class="c4"><span>2.033</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.nzti3vckiivz"></a><span>Measure density after concentrating</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>Parts</span></p></td><td class="c9"><p class="c4"><span>µg/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18</span></p></td><td class="c9"><p class="c4"><span>0.0605</span></p></td><td class="c9"><p class="c4"><span>1.921</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>11</span></p></td><td class="c9"><p class="c4"><span>0.0335</span></p></td><td class="c9"><p class="c4"><span>2.107</span></p></td></tr></tbody></table><h3 class="c29 c4"><a name="h.ewnnzrlm06qu"></a></h3><h3 class="c4"><a name="h.pf64q93rtmr3"></a><span>Digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>Double enzymes</span></p></td><td class="c1"><p><span></span></p></td><td class="c1"><p class="c4"><span>Single enzyme</span></p></td><td class="c1"><p><span></span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Parts</span></p></td><td class="c1"><p class="c4"><span>18</span></p></td><td class="c1"><p class="c4"><span>16</span></p></td><td class="c1"><p class="c4"><span>3</span></p></td><td class="c1"><p class="c4"><span>11</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>DNA</span></p></td><td class="c1"><p class="c4"><span>20</span></p></td><td class="c1"><p class="c4"><span>10</span></p></td><td class="c1"><p class="c4"><span>15</span></p></td><td class="c1"><p class="c4"><span>29</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Buffer</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>BSA</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>ddH2O</span></p></td><td class="c1"><p class="c4"><span>21.5</span></p></td><td class="c1"><p class="c4"><span>31.5</span></p></td><td class="c1"><p class="c4"><span>28</span></p></td><td class="c1"><p class="c4"><span>14.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>enzyme</span></p></td><td class="c1"><p class="c4"><span>EcoRⅠ 1.5</span></p></td><td class="c1"><p class="c4"><span>XbaⅠ1.5</span></p></td><td class="c1"><p class="c4"><span>XbaⅠ1</span></p></td><td class="c1"><p class="c4"><span>SpeⅠ1</span></p></td></tr><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>SpeⅠ1.5</span></p></td><td class="c1"><p class="c4"><span>PstⅠ1.5</span></p></td><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c2"><span></span></p></td></tr></tbody></table><h3 class="c4"><a name="h.id7koc7n89jl"></a><span>After 8hours </span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><h3 class="c4"><a name="h.euom5tw4uac7"></a><span>Parts</span></h3></td><td class="c9"><p class="c4"><span>3</span></p></td><td class="c9"><p class="c4"><span>11</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>20</span></p></td><td class="c9"><p class="c4"><span>20</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer</span></p></td><td class="c9"><p class="c4"><span>EcoRⅠbuffer 5</span></p></td><td class="c9"><p class="c4"><span>Buffer3 5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>BSA</span></p></td><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>23.5</span></p></td><td class="c9"><p class="c4"><span>23</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>enzyme</span></p></td><td class="c9"><p class="c4"><span>EcoRⅠ1</span></p></td><td class="c9"><p class="c4"><span>PstⅠ1</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.ekhxnmiid85t"></a><span>8.7</span></h1><h3 class="c4"><a name="h.zb49mmwonyx9"></a><span>1. Checking 4+5, 2+6 ‘s ligation by Gel electrophoresis</span></h3><h3 class="c4"><a name="h.sts8pafwtw56"></a><span> Digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>μL</span></p></td><td class="c9"><p class="c4"><span>2+6</span></p></td><td class="c9"><p class="c4"><span>4+5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>2(53ng)</span></p></td><td class="c9"><p class="c4"><span>3(28ng)</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer2</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>BSA</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>6.7</span></p></td><td class="c9"><p class="c4"><span>5.9</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>PstⅠ</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td></tr></tbody></table><h3 class="c29 c4"><a name="h.7hb0wq9fet7i"></a></h3><h3 class="c4"><a name="h.pxbfcxpcw2h0"></a><span>check by small gel</span></h3><h1 class="c49 c4"><a name="h.1n6cx51ccc1m"></a></h1><h1 class="c4"><a name="h.hzg362nyf3j"></a><span>8.8</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.ms09fpm4vjum"></a><span>1.transform the parts of 3-18,11-16,14-19</span></h3><h3 class="c4"><a name="h.ms09fpm4vjum"></a><span>2. Active bacteria of 4.5.18.11 and culture in LB liquid medium</span></h3><h3 class="c4"><a name="h.ms09fpm4vjum"></a><span>3. Presrvation species parts of 4-5</span></h3><p class="c2"><span></span></p><h1 class="c4"><a name="h.fel77li0jvq3"></a><span>8.9</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.golezolfnu2v"></a><span>1.check 2+6,4+5 by small gel </span></h3><h3 class="c4"><a name="h.golezolfnu2v"></a><span>2. Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>number</span></p></td><td class="c13"><p class="c4"><span>ng/µl</span></p></td><td class="c13"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>2+6</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>58</span></p></td><td class="c13"><p class="c4"><span>1.902</span></p></td></tr><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>78.5</span></p></td><td class="c13"><p class="c4"><span>1.826</span></p></td></tr><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>3</span></p></td><td class="c13"><p class="c4"><span>62.5</span></p></td><td class="c13"><p class="c4"><span>1.953</span></p></td></tr><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>4</span></p></td><td class="c13"><p class="c4"><span>60.5</span></p></td><td class="c13"><p class="c4"><span>2.017</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>4+5</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>31</span></p></td><td class="c13"><p class="c4"><span>2.081</span></p></td></tr><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>33</span></p></td><td class="c13"><p class="c4"><span>2.089</span></p></td></tr><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>3</span></p></td><td class="c13"><p class="c4"><span>20.5</span></p></td><td class="c13"><p class="c4"><span>2.291</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.95qz8jl117p"></a><span>3. Digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c10"><p class="c4"><span>parts</span></p></td><td class="c10"><p class="c4"><span>2+6</span></p></td><td class="c10"><p><span></span></p></td><td class="c10"><p><span></span></p></td><td class="c10"><p><span></span></p></td><td class="c10"><p class="c4"><span>5+4</span></p></td><td class="c16"><p><span></span></p></td><td class="c16"><p><span></span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>number</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c10"><p class="c4"><span>2</span></p></td><td class="c10"><p class="c4"><span>3</span></p></td><td class="c10"><p class="c4"><span>4</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c16"><p class="c4"><span>2</span></p></td><td class="c16"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>DNA</span></p></td><td class="c10"><p class="c4"><span>2</span></p></td><td class="c10"><p class="c4"><span>2</span></p></td><td class="c10"><p class="c4"><span>2</span></p></td><td class="c10"><p class="c4"><span>2</span></p></td><td class="c10"><p class="c4"><span>3</span></p></td><td class="c16"><p class="c4"><span>3</span></p></td><td class="c16"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>Buffer3</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c10"><p class="c4"><span>1</span></p></td><td class="c16"><p class="c4"><span>1</span></p></td><td class="c16"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>BSA</span></p></td><td class="c10"><p class="c4"><span>0.1</span></p></td><td class="c10"><p class="c4"><span>0.1</span></p></td><td class="c10"><p class="c4"><span>0.1</span></p></td><td class="c10"><p class="c4"><span>0.1</span></p></td><td class="c10"><p class="c4"><span>0.1</span></p></td><td class="c16"><p class="c4"><span>0.1</span></p></td><td class="c16"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>ddH2O</span></p></td><td class="c10"><p class="c4"><span>6.5</span></p></td><td class="c10"><p class="c4"><span>6.5</span></p></td><td class="c10"><p class="c4"><span>6.5</span></p></td><td class="c10"><p class="c4"><span>6.5</span></p></td><td class="c10"><p class="c4"><span>5.5</span></p></td><td class="c16"><p class="c4"><span>5.5</span></p></td><td class="c16"><p class="c4"><span>5.5</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c16"><p class="c4"><span>0.2</span></p></td><td class="c16"><p class="c4"><span>0.2</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>PstⅠ</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c10"><p class="c4"><span>0.2</span></p></td><td class="c16"><p class="c4"><span>0.2</span></p></td><td class="c16"><p class="c4"><span>0.2</span></p></td></tr></tbody></table><h3 class="c29 c4"><a name="h.ew5rjvlhlbes"></a></h3><h3 class="c4"><a name="h.ew5rjvlhlbes"></a><span>4. Extract plasmid of 4,5,18,11</span></h3><h3 class="c4"><a name="h.fbuct55jz3p2"></a><span>Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><h3 class="c4"><a name="h.hqsj9u31i72y"></a><span>number</span></h3></td><td class="c9"><p class="c4"><span>ng/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>5</span></p></td><td class="c9"><p class="c4"><span>73</span></p></td><td class="c9"><p class="c4"><span>2.000</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>4</span></p></td><td class="c9"><p class="c4"><span>71.5</span></p></td><td class="c9"><p class="c4"><span>2.072</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18</span></p></td><td class="c9"><p class="c4"><span>32.5</span></p></td><td class="c9"><p class="c4"><span>2.305</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>3</span></p></td><td class="c9"><p class="c4"><span>85</span></p></td><td class="c9"><p class="c4"><span>1.910</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>11</span></p></td><td class="c9"><p class="c4"><span>95.5</span></p></td><td class="c9"><p class="c4"><span>1.950</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>16</span></p></td><td class="c9"><p class="c4"><span>119</span></p></td><td class="c9"><p class="c4"><span>1.867</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.3z29ux1deqzo"></a><span>Digestion 50µl</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c17"><p class="c2"><span></span></p></td><td class="c17"><p class="c4"><span>5</span></p></td><td class="c21"><p class="c4"><span>4</span></p></td><td class="c17"><p class="c4"><span>18</span></p></td><td class="c21"><p class="c4"><span>3</span></p></td><td class="c21"><p class="c4"><span>11</span></p></td><td class="c21"><p class="c4"><span>16</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>DNA</span></p></td><td class="c17"><p class="c4"><span>13</span></p></td><td class="c21"><p class="c4"><span>13</span></p></td><td class="c17"><p class="c4"><span>30</span></p></td><td class="c21"><p class="c4"><span>11</span></p></td><td class="c21"><p class="c4"><span>10</span></p></td><td class="c21"><p class="c4"><span>8</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>Buffer3</span></p></td><td class="c17"><p class="c4"><span>5</span></p></td><td class="c21"><p class="c4"><span>5</span></p></td><td class="c17"><p class="c4"><span>5</span></p></td><td class="c21"><p class="c4"><span>5</span></p></td><td class="c21"><p class="c4"><span>5</span></p></td><td class="c21"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>BSA</span></p></td><td class="c17"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td><td class="c17"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>ddH2O</span></p></td><td class="c17"><p class="c4"><span>29.5</span></p></td><td class="c21"><p class="c4"><span>29.5</span></p></td><td class="c17"><p class="c4"><span>19.5</span></p></td><td class="c21"><p class="c4"><span>31.5</span></p></td><td class="c21"><p class="c4"><span>30.5</span></p></td><td class="c21"><p class="c4"><span>34.5</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>enzyme</span></p></td><td class="c17"><p class="c4"><span>EcoRⅠ 1</span></p></td><td class="c21"><p class="c4"><span>XbaⅠ1</span></p></td><td class="c17"><p class="c4"><span>EcoRⅠ 1</span></p></td><td class="c21"><p class="c4"><span>XbaⅠ1</span></p></td><td class="c21"><p class="c4"><span>EcoRⅠ 1</span></p></td><td class="c21"><p class="c4"><span>XbaⅠ1</span></p></td></tr><tr class="c12"><td class="c17"><p class="c2"><span></span></p></td><td class="c17"><p class="c4"><span>SpeⅠ1</span></p></td><td class="c21"><p class="c4"><span>PstⅠ1</span></p></td><td class="c17"><p class="c4"><span>SpeⅠ1</span></p></td><td class="c21"><p class="c4"><span>PstⅠ1</span></p></td><td class="c21"><p class="c4"><span>SpeⅠ1</span></p></td><td class="c21"><p class="c4"><span>PstⅠ1</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.jmqfpq9xkm9z"></a><span>8.11</span></h1><h4 class="c4"><a name="h.m6rgdwzdsd3p"></a><span>1. Checking ligation correctness of 14&19 using small gel----fails</span></h4><h4 class="c4"><a name="h.m6rgdwzdsd3p"></a><span>2.try to ligate using 3A</span></h4><h1 class="c4"><a name="h.z0x6hx6e7ltc"></a><span>8.12</span></h1><h3 class="c4"><a name="h.dm8f9683o5dr"></a><span>1. Extract plasmid of 5+4 and Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>number</span></p></td><td class="c9"><p class="c4"><span>ng/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>55</span></p></td><td class="c9"><p class="c4"><span>1.964</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>39</span></p></td><td class="c9"><p class="c4"><span>2.324</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>3</span></p></td><td class="c9"><p class="c4"><span>41</span></p></td><td class="c9"><p class="c4"><span>2.412</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>4</span></p></td><td class="c9"><p class="c4"><span>81</span></p></td><td class="c9"><p class="c4"><span>2.051</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>5</span></p></td><td class="c9"><p class="c4"><span>42</span></p></td><td class="c9"><p class="c4"><span>2.154</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>6</span></p></td><td class="c9"><p class="c4"><span>58</span></p></td><td class="c9"><p class="c4"><span>1.966</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.77mylrq8vnt2"></a><span>2.check by single enzyme digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c17"><p class="c4"><span>number</span></p></td><td class="c17"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>2</span></p></td><td class="c17"><p class="c4"><span>3</span></p></td><td class="c21"><p class="c4"><span>4</span></p></td><td class="c21"><p class="c4"><span>5</span></p></td><td class="c21"><p class="c4"><span>6</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>DNA</span></p></td><td class="c17"><p class="c4"><span>3</span></p></td><td class="c21"><p class="c4"><span>4</span></p></td><td class="c17"><p class="c4"><span>4</span></p></td><td class="c21"><p class="c4"><span>2</span></p></td><td class="c21"><p class="c4"><span>4</span></p></td><td class="c21"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>Buffer EcoR I</span></p></td><td class="c17"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c17"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>ddH2O</span></p></td><td class="c17"><p class="c4"><span>5.5</span></p></td><td class="c21"><p class="c4"><span>4.5</span></p></td><td class="c17"><p class="c4"><span>4.5</span></p></td><td class="c21"><p class="c4"><span>6.5</span></p></td><td class="c21"><p class="c4"><span>4.5</span></p></td><td class="c21"><p class="c4"><span>5.5</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c17"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td><td class="c17"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td></tr></tbody></table><h3 class="c29 c4"><a name="h.sp1o9aob8jry"></a></h3><h3 class="c4"><a name="h.f568ba30zhy7"></a><span>Check using small gel</span></h3><h3 class="c4"><a name="h.f568ba30zhy7"></a><span>3.cultrue bacteria of part 13</span></h3><h3 class="c4"><a name="h.f568ba30zhy7"></a><span>4. ligate 2+6+3,11+16,18+13</span></h3><p class="c2"><span></span></p><h1 class="c4"><a name="h.alf83syip56z"></a><span>8.13</span></h1><h3 class="c4"><a name="h.ke3ebgbum5n"></a><span>1.Extract plasmid </span></h3><h3 class="c4"><a name="h.ke3ebgbum5n"></a><span>2.pick colony of 2+6+3,18+3,16+3 and culture in shaker</span></h3><p class="c2"><span></span></p><h1 class="c4"><a name="h.e0ipvrwodbd7"></a><span>8.14 </span></h1><h4 class="c4"><a name="h.qq0p6vx7yo2i"></a><span>Checking whether colony of different size contain different plasmids, or whether could be used to pick colony raising transformation possibility. But it made no difference</span></h4><h1 class="c4"><a name="h.5k95r8qmtjok"></a><span>8.15</span></h1><h3 class="c4"><a name="h.wy8969l7pop"></a><span>1.measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>number</span></p></td><td class="c9"><p class="c4"><span>µg/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>2+6+3-1</span></p></td><td class="c9"><p class="c4"><span>0.032</span></p></td><td class="c9"><p class="c4"><span>3.439</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>2+6+3-2</span></p></td><td class="c9"><p class="c4"><span>0.064</span></p></td><td class="c9"><p class="c4"><span>2.370</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>11+16</span></p></td><td class="c9"><p class="c4"><span>0.056</span></p></td><td class="c9"><p class="c4"><span>2.306</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>11+16</span></p></td><td class="c9"><p class="c4"><span>0.102</span></p></td><td class="c9"><p class="c4"><span>2.010</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18+3</span></p></td><td class="c9"><p class="c4"><span>0.037</span></p></td><td class="c9"><p class="c4"><span>2.434</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18+3</span></p></td><td class="c9"><p class="c4"><span>0.033</span></p></td><td class="c9"><p class="c4"><span>2.332</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.3m4xfb4u4qv8"></a><span>2. Digestion</span></h3><p class="c2"><span></span></p><h3 class="c4"><a name="h.c1ekew4tc9t5"></a><span>Single enzyme 10µl</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c17"><p class="c4"><span>number</span></p></td><td class="c17"><p class="c4"><span>2+6+3-1</span></p></td><td class="c21"><p class="c4"><span>2+6+3-2</span></p></td><td class="c17"><p class="c4"><span>3+18-1</span></p></td><td class="c21"><p class="c4"><span>3+18-2</span></p></td><td class="c21"><p class="c4"><span>11+16</span></p></td><td class="c21"><p class="c4"><span>11+16</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>DNA</span></p></td><td class="c17"><p class="c4"><span>4</span></p></td><td class="c21"><p class="c4"><span>2</span></p></td><td class="c17"><p class="c4"><span>4</span></p></td><td class="c21"><p class="c4"><span>6</span></p></td><td class="c21"><p class="c4"><span>2.5</span></p></td><td class="c21"><p class="c4"><span>1.5</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>Buffer EcoR I</span></p></td><td class="c17"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c17"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>ddH2O</span></p></td><td class="c17"><p class="c4"><span>4.7</span></p></td><td class="c21"><p class="c4"><span>6.7</span></p></td><td class="c17"><p class="c4"><span>4.7</span></p></td><td class="c21"><p class="c4"><span>2.7</span></p></td><td class="c21"><p class="c4"><span>6.2</span></p></td><td class="c21"><p class="c4"><span>7.2</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c17"><p class="c4"><span>0.3</span></p></td><td class="c21"><p class="c4"><span>0.3</span></p></td><td class="c17"><p class="c4"><span>0.3</span></p></td><td class="c21"><p class="c4"><span>0.3</span></p></td><td class="c21"><p class="c4"><span>0.3</span></p></td><td class="c21"><p class="c4"><span>0.3</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.apo7y8k82owr"></a><span>Double enzyme 10µl</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c11"><p class="c4"><span>number</span></p></td><td class="c20"><p class="c4"><span>18+3-1</span></p></td><td class="c11"><p class="c4"><span>18+3-2</span></p></td><td class="c11"><p class="c4"><span>18</span></p></td><td class="c11"><p class="c4"><span>2+6+3-1</span></p></td><td class="c20"><p class="c4"><span>2+6+3-2</span></p></td><td class="c20"><p class="c4"><span>2+6</span></p></td><td class="c20"><p class="c4"><span>11+16</span></p></td><td class="c20"><p class="c4"><span>11+16</span></p></td></tr><tr class="c12"><td class="c11"><p class="c4"><span>DNA</span></p></td><td class="c20"><p class="c4"><span>4</span></p></td><td class="c11"><p class="c4"><span>6</span></p></td><td class="c11"><p class="c4"><span>6</span></p></td><td class="c11"><p class="c4"><span>4</span></p></td><td class="c20"><p class="c4"><span>2</span></p></td><td class="c20"><p class="c4"><span>3</span></p></td><td class="c20"><p class="c4"><span>2.5</span></p></td><td class="c20"><p class="c4"><span>1.5</span></p></td></tr><tr class="c12"><td class="c11"><p class="c4"><span>Buffer3</span></p></td><td class="c20"><p class="c4"><span>1</span></p></td><td class="c11"><p class="c4"><span>1</span></p></td><td class="c11"><p class="c4"><span>1</span></p></td><td class="c11"><p class="c4"><span>1</span></p></td><td class="c20"><p class="c4"><span>1</span></p></td><td class="c20"><p class="c4"><span>1</span></p></td><td class="c20"><p class="c4"><span>1</span></p></td><td class="c20"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c11"><p class="c4"><span>BSA</span></p></td><td class="c20"><p class="c4"><span>0.1</span></p></td><td class="c11"><p class="c4"><span>0.1</span></p></td><td class="c11"><p class="c4"><span>0.1</span></p></td><td class="c11"><p class="c4"><span>0.1</span></p></td><td class="c20"><p class="c4"><span>0.1</span></p></td><td class="c20"><p class="c4"><span>0.1</span></p></td><td class="c20"><p class="c4"><span>0.1</span></p></td><td class="c20"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c11"><p class="c4"><span>ddH2O</span></p></td><td class="c20"><p class="c4"><span>4.3</span></p></td><td class="c11"><p class="c4"><span>2.3</span></p></td><td class="c11"><p class="c4"><span>2.4</span></p></td><td class="c11"><p class="c4"><span>4.3</span></p></td><td class="c20"><p class="c4"><span>6.3</span></p></td><td class="c20"><p class="c4"><span>5.3</span></p></td><td class="c20"><p class="c4"><span>5.8</span></p></td><td class="c20"><p class="c4"><span>6.8</span></p></td></tr><tr class="c12"><td class="c11"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c11"><p class="c4"><span>0.3</span></p></td><td class="c11"><p class="c4"><span>0.3</span></p></td><td class="c11"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td></tr><tr class="c12"><td class="c11"><p class="c4"><span>PstⅠ</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c11"><p class="c4"><span>0.3</span></p></td><td class="c11"><p class="c4"><span>0.3</span></p></td><td class="c11"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td><td class="c20"><p class="c4"><span>0.3</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.l40msbsdoxxo"></a><span>8.16</span></h1><h3 class="c4"><a name="h.9a0lm2k3wig9"></a><span>Check yesterdays’ digestion by gel electrophoresis</span></h3><p class="c4"><img height="573" src="images/image00.jpg" width="573"></p><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c47"><p class="c4 c22"><span>Ladder</span></p></td><td class="c48"><p class="c4 c22"><span>18-3</span></p></td><td class="c47"><p><span></span></p></td><td class="c47"><p class="c4 c22"><span>18-3</span></p></td><td class="c47"><p><span></span></p></td><td class="c48"><p class="c4 c22"><span>18</span></p></td><td class="c48"><p class="c4 c22"><span>6-2-3</span></p></td><td class="c48"><p class="c4 c22"><span>6-2-3</span></p></td><td class="c48"><p class="c4 c22"><span>6-2</span></p></td></tr><tr class="c12"><td class="c47"><p class="c4 c22"><span>100bp plus</span></p></td><td class="c48"><p class="c4 c22"><span>single</span></p></td><td class="c47"><p class="c4 c22"><span>double</span></p></td><td class="c47"><p class="c4 c22"><span>single</span></p></td><td class="c47"><p class="c4 c22"><span>double</span></p></td><td class="c48"><p class="c4 c22"><span>double</span></p></td><td class="c48"><p class="c4 c22"><span>double</span></p></td><td class="c48"><p class="c4 c22"><span>double</span></p></td><td class="c48"><p class="c4 c22"><span>double</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.6vm4ek23k6ec"></a><span>8.17</span></h1><h3 class="c4"><a name="h.t0sbfske940j"></a><span>1. Presrvation species of pSB1AC3_BBa13017</span></h3><h3 class="c4"><a name="h.n83ej944zlf8"></a><span>2. Extract plasmid of 18,pSB1AC3_BBa13017,measure density </span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>number</span></p></td><td class="c9"><p class="c4"><span>µg/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-1</span></p></td><td class="c9"><p class="c4"><span>0.199</span></p></td><td class="c9"><p class="c4"><span>2.036</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-2</span></p></td><td class="c9"><p class="c4"><span>0.168</span></p></td><td class="c9"><p class="c4"><span>2.036</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-3</span></p></td><td class="c9"><p class="c4"><span>0.113</span></p></td><td class="c9"><p class="c4"><span>2.083</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-4</span></p></td><td class="c9"><p class="c4"><span>0.103</span></p></td><td class="c9"><p class="c4"><span>2.102</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-5</span></p></td><td class="c9"><p class="c4"><span>0.174</span></p></td><td class="c9"><p class="c4"><span>2.129</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-6</span></p></td><td class="c9"><p class="c4"><span>0.147</span></p></td><td class="c9"><p class="c4"><span>2.115</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-7</span></p></td><td class="c9"><p class="c4"><span>0.064</span></p></td><td class="c9"><p class="c4"><span>2.345</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-8</span></p></td><td class="c9"><p class="c4"><span>0.106</span></p></td><td class="c9"><p class="c4"><span>2.186</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-9</span></p></td><td class="c9"><p class="c4"><span>0.163</span></p></td><td class="c9"><p class="c4"><span>2.138</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1AC3_BBa13017-10</span></p></td><td class="c9"><p class="c4"><span>0.170</span></p></td><td class="c9"><p class="c4"><span>2.092</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18-1</span></p></td><td class="c9"><p class="c4"><span>0.110</span></p></td><td class="c9"><p class="c4"><span>2.095</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18-2</span></p></td><td class="c9"><p class="c4"><span>0.124</span></p></td><td class="c9"><p class="c4"><span>2.102</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>18-3</span></p></td><td class="c9"><p class="c4"><span>0.140</span></p></td><td class="c9"><p class="c4"><span>2.121</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.h74qm3ioftn6"></a><span>3. Prepare medium of TY(culturing rhizobium),CM(supplemented medium)</span></h3><h3 class="c4"><a name="h.h74qm3ioftn6"></a><span>4. Digest pSB1AC3_BBa13017 as Carrier</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c37"><p class="c4"><span>DNA</span></p></td><td class="c37"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>Buffer2</span></p></td><td class="c37"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>BSA</span></p></td><td class="c37"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>ddH2O</span></p></td><td class="c37"><p class="c4"><span>37.5</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c37"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>PstⅠ</span></p></td><td class="c37"><p class="c4"><span>1</span></p></td></tr></tbody></table><p class="c4"><img height="610" src="images/image01.jpg" width="610"></p><h6 class="c4"><a name="h.jnl1gq2qm9xp"></a><span>Extract 3055bp strip</span></h6><h1 class="c4"><a name="h.bgliaogofoy0"></a><span>8.18</span></h1><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>1.Ligate 5,4</span></h3><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>2.transform pSB1C3</span></h3><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>8.19</span></h3><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>1.culture rhizobium on TY medium</span></h3><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>2.prepare CM,M9 medium</span></h3><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>3.LeuB PCR</span></h3><h3 class="c4"><a name="h.8u5x2xe0ixdw"></a><span>4. Presrvation species of Bean strain</span></h3><h3 class="c4"><a name="h.wuw8mhckhe1z"></a><span>5. Extract plasmid and Digest</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c10"><p class="c4"><span>number</span></p></td><td class="c10"><p class="c4"><span>18</span></p></td><td class="c10"><p class="c4"><span>3</span></p></td><td class="c10"><p class="c4"><span>2+6</span></p></td><td class="c10"><p class="c4"><span>16</span></p></td><td class="c10"><p class="c4"><span>11</span></p></td><td class="c16"><p class="c4"><span>14+19</span></p></td><td class="c16"><p class="c4"><span>13</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>DNA</span></p></td><td class="c10"><p class="c4"><span>12</span></p></td><td class="c10"><p class="c4"><span>10</span></p></td><td class="c10"><p class="c4"><span>18</span></p></td><td class="c10"><p class="c4"><span>9</span></p></td><td class="c10"><p class="c4"><span>7</span></p></td><td class="c16"><p class="c4"><span>7</span></p></td><td class="c16"><p class="c4"><span>6</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>Buffer2</span></p></td><td class="c10"><p class="c4"><span>5</span></p></td><td class="c10"><p class="c4"><span>5</span></p></td><td class="c10"><p class="c4"><span>5</span></p></td><td class="c10"><p class="c4"><span>5</span></p></td><td class="c10"><p class="c4"><span>5</span></p></td><td class="c16"><p class="c4"><span>5</span></p></td><td class="c16"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>BSA</span></p></td><td class="c10"><p class="c4"><span>0.5</span></p></td><td class="c10"><p class="c4"><span>0.5</span></p></td><td class="c10"><p class="c4"><span>0.5</span></p></td><td class="c10"><p class="c4"><span>0.5</span></p></td><td class="c10"><p class="c4"><span>0.5</span></p></td><td class="c16"><p class="c4"><span>0.5</span></p></td><td class="c16"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>ddH2O</span></p></td><td class="c10"><p class="c4"><span>30.1</span></p></td><td class="c10"><p class="c4"><span>31.5</span></p></td><td class="c10"><p class="c4"><span>24.1</span></p></td><td class="c10"><p class="c4"><span>33.1</span></p></td><td class="c10"><p class="c4"><span>35.1</span></p></td><td class="c16"><p class="c4"><span>35.1</span></p></td><td class="c16"><p class="c4"><span>36.1</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>enzyme</span></p></td><td class="c10"><p class="c4"><span>EcoRI1.2</span></p></td><td class="c10"><p class="c4"><span>XbaⅠ1.2</span></p></td><td class="c10"><p class="c4"><span>EcoRI1.2</span></p></td><td class="c10"><p class="c4"><span>XbaⅠ1.2</span></p></td><td class="c10"><p class="c4"><span>EcoRI1.2</span></p></td><td class="c16"><p class="c4"><span>EcoRI1.2</span></p></td><td class="c16"><p class="c4"><span>XbaⅠ1.2</span></p></td></tr><tr class="c12"><td class="c10"><p class="c2"><span></span></p></td><td class="c10"><p class="c4"><span>SpeⅠ1.2</span></p></td><td class="c10"><p class="c4"><span>PstⅠ1.2</span></p></td><td class="c10"><p class="c4"><span>SpeⅠ1.2</span></p></td><td class="c10"><p class="c4"><span>PstⅠ1.2</span></p></td><td class="c10"><p class="c4"><span>SpeⅠ1.2</span></p></td><td class="c16"><p class="c4"><span>SpeⅠ1.2</span></p></td><td class="c16"><p class="c4"><span>PstⅠ1.2</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.79kmvmm53rae"></a><span>8.20</span></h1><h3 class="c4"><a name="h.rb7ae2jhzsxo"></a><span>1. Presrvation species of 5+4 and extract plasmid,measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>number</span></p></td><td class="c9"><p class="c4"><span>ng/µl</span></p></td><td class="c9"><p class="c4"><span>A260∕A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>99.5</span></p></td><td class="c9"><p class="c4"><span>2.098</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>140.5</span></p></td><td class="c9"><p class="c4"><span>2.162</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>3</span></p></td><td class="c9"><p class="c4"><span>99</span></p></td><td class="c9"><p class="c4"><span>2.152</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>4</span></p></td><td class="c9"><p class="c4"><span>123.5</span></p></td><td class="c9"><p class="c4"><span>2.093</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>5</span></p></td><td class="c9"><p class="c4"><span>137.5</span></p></td><td class="c9"><p class="c4"><span>2.083</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.cd31d7gjoaj9"></a><span>2. Digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>number</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>2</span></p></td><td class="c0"><p class="c4"><span>3</span></p></td><td class="c6"><p class="c4"><span>4</span></p></td><td class="c6"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>DNA</span></p></td><td class="c0"><p class="c4"><span>1.3</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>1.3</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>Buffer3</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>BSA</span></p></td><td class="c0"><p class="c4"><span>0.1</span></p></td><td class="c0"><p class="c4"><span>0.1</span></p></td><td class="c0"><p class="c4"><span>0.1</span></p></td><td class="c6"><p class="c4"><span>0.1</span></p></td><td class="c6"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>ddH2O</span></p></td><td class="c0"><p class="c4"><span>7.1</span></p></td><td class="c0"><p class="c4"><span>7.4</span></p></td><td class="c0"><p class="c4"><span>7.1</span></p></td><td class="c6"><p class="c4"><span>7.4</span></p></td><td class="c6"><p class="c4"><span>7.4</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>EcoRⅠ</span></p></td><td class="c0"><p class="c4"><span>0.25</span></p></td><td class="c0"><p class="c4"><span>0.25</span></p></td><td class="c0"><p class="c4"><span>0.25</span></p></td><td class="c6"><p class="c4"><span>0.25</span></p></td><td class="c6"><p class="c4"><span>0.25</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>PstⅠ</span></p></td><td class="c0"><p class="c4"><span>0.25</span></p></td><td class="c0"><p class="c4"><span>0.25</span></p></td><td class="c0"><p class="c4"><span>0.25</span></p></td><td class="c6"><p class="c4"><span>0.25</span></p></td><td class="c6"><p class="c4"><span>0.25</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c49 c4"><a name="h.wlf6j8rjal3t"></a></h1><h1 class="c4"><a name="h.urk4as897tek"></a><span>8.22</span></h1><h3 class="c4"><a name="h.dwwnj6olsp9f"></a><span>1、Presrvation species of 5+4 and extract plasmid,measure density, digest</span></h3><h3 class="c4"><a name="h.4k6v2rq1fzij"></a><span>2、pick single colonies of 19-14&13;2-6&3 , 11&16 and culture in shaker</span></h3><h3 class="c4"><a name="h.k3thznec7nhf"></a><span>3、PCR Leu(50ul),recover and check</span></h3><p class="c2"><span></span></p><p class="c4"><img height="197" src="images/image04.jpg" width="187"></p><p class="c4"><span>1</span><span class="c3">0×</span><span>Taq Buffer(with MgSO4) 5μL</span></p><p class="c4"><span>MgCl2 4μL</span></p><p class="c4"><span>Primer-F 1.5μL</span></p><p class="c4"><span>Primer-R 1.5μL</span></p><p class="c4"><span>H2O 33.5μL</span></p><p class="c4"><span>dNTP 2μL</span></p><p class="c4"><span>DNA 2μL</span></p><p class="c4"><span>Taq 0.25μL</span></p><p class="c4"><span>Pfu 0.25μL </span></p><p class="c4 c22"><span>Recommended By Advicer Tan</span></p><p class="c4 c22"><span>Result: success</span></p><p class="c2"><span></span></p><p class="c2"><span></span></p><p class="c2"><span></span></p><p class="c2"><span></span></p><h1 class="c49 c4"><a name="h.2yfk6buo0k2e"></a></h1><h1 class="c4"><a name="h.2yfk6buo0k2e"></a><span>8.23</span></h1><h3 class="c4"><a name="h.g493ims3jbp8"></a><span>1、Presrvation species of 2 6&3,11&16,14 19&13 and extract plasmid, measure density,digest</span></h3><h3 class="c4"><a name="h.tknykw38j7c4"></a><span>density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c15"><p class="c4"><span>number</span></p></td><td class="c30"><p class="c4"><span>2 6&3</span></p></td><td class="c54"><p class="c4"><span>11&16</span></p></td><td class="c51"><p class="c4"><span>1419&13</span><span class="c3"></span></p></td><td class="c41"><p class="c4"><span class="c3"></span></p></td><td class="c30"><p class="c4"><span class="c3"></span></p></td><td class="c39"><p class="c4"><span class="c3"></span></p></td><td class="c39"><p class="c4"><span class="c3"></span></p></td></tr><tr class="c12"><td class="c15"><p class="c4"><span>density</span></p><p class="c4"><span>(ng/ul)</span></p></td><td class="c30"><p class="c4"><span>30</span></p></td><td class="c54"><p class="c4"><span>49</span></p></td><td class="c51"><p class="c4"><span>45</span></p></td><td class="c41"><p class="c4"><span>132</span></p></td><td class="c30"><p class="c4"><span>62</span></p></td><td class="c39"><p class="c4"><span>42</span></p></td><td class="c39"><p class="c4"><span>64</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.r1xl2xgbvvgi"></a><span>Digestion</span></h3><h3 class="c4"><a name="h.qvlzmnr7s30"></a><span>Single enzyme</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c30"><p class="c2"><span></span></p></td><td class="c31"><p class="c4"><span>2 6&3</span></p></td><td class="c30"><p class="c4"><span>11&16</span></p></td><td class="c35"><p class="c4"><span>1419&13</span><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td></tr><tr class="c12"><td class="c30"><p class="c4"><span>DNA</span></p></td><td class="c31"><p class="c4"><span>3.3</span></p></td><td class="c30"><p class="c4"><span>2</span></p></td><td class="c35"><p class="c4"><span>2.2</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1.5</span></p></td><td class="c8"><p class="c4"><span>2.3</span></p></td><td class="c8"><p class="c4"><span>1.5</span></p></td></tr><tr class="c12"><td class="c30"><p class="c4"><span>Buffer4</span></p></td><td class="c31"><p class="c4"><span>1</span></p></td><td class="c30"><p class="c4"><span>1</span></p></td><td class="c35"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c30"><p class="c4"><span>DdH2O</span></p></td><td class="c31"><p class="c4"><span>5.4</span></p></td><td class="c30"><p class="c4"><span>6.6</span></p></td><td class="c35"><p class="c4"><span>6.4</span></p></td><td class="c8"><p class="c4"><span>7.6</span></p></td><td class="c8"><p class="c4"><span>7.1</span></p></td><td class="c8"><p class="c4"><span>6.3</span></p></td><td class="c8"><p class="c4"><span>7.1</span></p></td></tr><tr class="c12"><td class="c30"><p class="c4"><span>XbaI</span></p></td><td class="c31"><p class="c4"><span>0.3</span></p></td><td class="c30"><p class="c4"><span>0.3</span></p></td><td class="c35"><p class="c4"><span>0.3</span></p></td><td class="c8"><p class="c4"><span>0.3</span></p></td><td class="c8"><p class="c4"><span>0.3</span></p></td><td class="c8"><p class="c4"><span>0.3</span></p></td><td class="c8"><p class="c4"><span>0.3</span></p></td></tr><tr class="c12"><td class="c30"><p class="c4"><span>BSA</span></p></td><td class="c31"><p class="c4"><span>0.1</span></p></td><td class="c30"><p class="c4"><span>0.1</span></p></td><td class="c35"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.78jdujd9b23x"></a><span>Double enzymes</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c33"><p class="c2"><span></span></p></td><td class="c8"><p class="c4"><span>2 6&3</span></p></td><td class="c25"><p class="c4"><span>11&16</span></p></td><td class="c35"><p class="c4"><span>1419&13</span><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td><td class="c8"><p class="c4"><span class="c3"></span></p></td></tr><tr class="c12"><td class="c33"><p class="c4"><span>DNA</span></p></td><td class="c8"><p class="c4"><span>3.3</span></p></td><td class="c25"><p class="c4"><span>2</span></p></td><td class="c35"><p class="c4"><span>2.2</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1.5</span></p></td><td class="c8"><p class="c4"><span>2.3</span></p></td><td class="c8"><p class="c4"><span>1.5</span></p></td></tr><tr class="c12"><td class="c33"><p class="c4"><span>Buffer4</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c25"><p class="c4"><span>1</span></p></td><td class="c35"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td><td class="c8"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c33"><p class="c4"><span>BSA</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c25"><p class="c4"><span>0.1</span></p></td><td class="c35"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td><td class="c8"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c33"><p class="c4"><span>H2O</span></p></td><td class="c8"><p class="c4"><span>5.1</span></p></td><td class="c25"><p class="c4"><span>6.4</span></p></td><td class="c35"><p class="c4"><span>6.2</span></p></td><td class="c8"><p class="c4"><span>7.4</span></p></td><td class="c8"><p class="c4"><span>6.9</span></p></td><td class="c8"><p class="c4"><span>6.1</span></p></td><td class="c8"><p class="c4"><span>6.9</span></p></td></tr><tr class="c12"><td class="c33"><p class="c4"><span>EcoRI-HF</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c25"><p class="c4"><span>0.25</span></p></td><td class="c35"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td></tr><tr class="c12"><td class="c33"><p class="c4"><span>SpeI</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c25"><p class="c4"><span>0.25</span></p></td><td class="c35"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td><td class="c8"><p class="c4"><span>0.25</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.uosio89ahtai"></a><span>result:success</span></h3><h3 class="c4"><a name="h.oapjx65rnz4x"></a><span>2、</span><span class="c36">Preservation</span><span> species of CFN42 WT and BL21</span></h3><h3 class="c4"><a name="h.oapjx65rnz4x"></a><span>3、check 18&3 be small gel ——succeed</span></h3><h3 class="c4"><a name="h.oapjx65rnz4x"></a><span>4、Prepare medium:LB liquid medium 300ml,</span></h3><h3 class="c4"><a name="h.oapjx65rnz4x"></a><span>LB medium 150ml </span></h3><h3 class="c4"><a name="h.oapjx65rnz4x"></a><span> TY medium 150ml</span></h3><h3 class="c4"><a name="h.oapjx65rnz4x"></a><span>5、Prepare SMM medium,+ pro+ Vb1</span></h3><h1 class="c4"><a name="h.r6ryyomviv4b"></a><span>8.24</span></h1><h3 class="c4"><a name="h.ciewiyq5t66a"></a><span>1、Prepare SMM medium :MM+pro+Vb1 MM+pro+Vb1+leu</span></h3><h3 class="c4"><a name="h.ciewiyq5t66a"></a><span>2、check by small gel</span></h3><h1 class="c4"><a name="h.he4e0lgvyqrw"></a><span>8.25</span></h1><h3 class="c4"><a name="h.8kqf064rpjw5"></a><a href="#" name="id.b6b2514dfea5"></a><span>1、ligate 11-16&18-13 and 5&4 using 3A</span></h3><h3 class="c4"><a name="h.tkxpq18ksh8e"></a><span>Measure density:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>11-16</span></p></td><td class="c1"><p class="c4"><span>18-13</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>density(ng/ul)</span></p></td><td class="c1"><p class="c4"><span>46.5</span></p></td><td class="c1"><p class="c4"><span>136.5</span></p></td><td class="c1"><p class="c4"><span>85.5</span></p></td><td class="c1"><p class="c4"><span>71</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.f8muhyhuv6l2"></a><span>Double enzymes</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>18-3</span></p></td><td class="c1"><p class="c4"><span>11-16</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>DNA</span></p></td><td class="c1"><p class="c4"><span>12</span></p></td><td class="c1"><p class="c4"><span>10</span></p></td><td class="c1"><p class="c4"><span>10</span></p></td><td class="c1"><p class="c4"><span>25</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Buffer4</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>BSA</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td><td class="c1"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>H2O</span></p></td><td class="c1"><p class="c4"><span>29.5</span></p></td><td class="c1"><p class="c4"><span>32.5</span></p></td><td class="c1"><p class="c4"><span>31.5</span></p></td><td class="c1"><p class="c4"><span>16.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>enzyme1</span></p></td><td class="c1"><p class="c4"><span>EcoRI-HF 1.5</span></p></td><td class="c1"><p class="c4"><span>XbaI 1</span></p></td><td class="c1"><p class="c4"><span>EcoRI-HF 1.5</span></p></td><td class="c1"><p class="c4"><span>XbaI 1.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>enzyme 2</span></p></td><td class="c1"><p class="c4"><span>SpeI 1.5</span></p></td><td class="c1"><a href="#" name="id.5ffd2b59663f"></a><p class="c4"><span>PstI 1</span></p></td><td class="c1"><p class="c4"><span>SpeI 1.5</span></p></td><td class="c1"><p class="c4"><span>PstI 1.5</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.ynposbrw4sji"></a><span>Check by gel</span></h3><h3 class="c4"><a name="h.sundqa7jgp4t"></a><span>Ligation of 5&4</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>5</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c0"><p class="c4"><span>AC</span></p></td><td class="c0"><p class="c4"><span>T4</span></p></td><td class="c6"><p class="c4"><span>Buffer</span></p></td><td class="c6"><p class="c4"><span>H2O</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>6</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>2</span></p></td><td class="c6"><p class="c4"><span>3</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.ezohoz16dnao"></a><span>Ligation of 11-16&18-13:(ul)</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>K381001</span></p></td><td class="c0"><p class="c4"><span>18-3</span></p></td><td class="c0"><p class="c4"><span>11-16</span></p></td><td class="c0"><p class="c4"><span>Buffer</span></p></td><td class="c6"><p class="c4"><span>T4</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>5</span></p></td><td class="c0"><p class="c4"><span>6</span></p></td><td class="c0"><p class="c4"><span>6</span></p></td><td class="c0"><p class="c4"><span>2</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.8ylqa0m2w31v"></a><span>2、inoculate HB101 and BL21 into the solid medium (MM+VB1+Pro and MM+VB1+Pro+Leu),culture the Rhizobium etli CFN42 and Sinorhizobium meliloti 1021 on TY solid medium at 30℃</span></h3><h3 class="c29 c4"><a name="h.94y273j4x26h"></a></h3><h1 class="c4"><a name="h.b25s7bsf4qft"></a><span>8.27</span></h1><h3 class="c4"><a name="h.94y273j4x26h"></a><span>1、transform 18-3&11</span></h3><h3 class="c4"><a name="h.94y273j4x26h"></a><span>2、pick 3 colonies of 5&4 and culture in l LB liquid medium</span></h3><h3 class="c4"><a name="h.94y273j4x26h"></a><span>3、culture LeuB and K115001 in LB liquid medium</span></h3><h3 class="c4"><a name="h.94y273j4x26h"></a><span>4、recover 22,21,3 and ligate 21&3,22&3</span></h3><h3 class="c4"><a name="h.k3ru3lgh65ye"></a><a href="#" name="id.887d11515b76"></a><span>Ligation of 21&3:(ul)</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>22</span></p></td><td class="c1"><p class="c4"><span>3</span></p></td><td class="c1"><p class="c4"><span>T4</span></p></td><td class="c1"><p class="c4"><span>Buffer</span></p></td><td class="c1"><p class="c4"><span>ddH2O</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>7</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>6</span></p></td></tr></tbody></table><h3 class="c29 c4"><a name="h.6pt8yxfqhwg6"></a></h3><h3 class="c4"><a name="h.6pt8yxfqhwg6"></a><span>Ligation of 22&3:(ul)</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>21</span></p></td><td class="c1"><p class="c4"><span>3</span></p></td><td class="c1"><p class="c4"><span>T4</span></p></td><td class="c1"><p class="c4"><span>Buffer</span></p></td><td class="c1"><p class="c4"><span>ddH2O</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>8.5</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>4.5</span></p></td></tr></tbody></table><p class="c2"><span></span></p><p class="c2"><span></span></p><h1 class="c4"><a name="h.5bliw8b6jufq"></a><span>8.28</span></h1><h3 class="c4"><a name="h.ee824wmlivl1"></a><span>1、Prepare medium:LB liquid medium 500ml</span></h3><h3 class="c4"><a name="h.ee824wmlivl1"></a><span>2、transform 5&4 and 18-3&11-16 again,and transform leu 21&3 and 22&3</span></h3><h3 class="c4"><a name="h.ee824wmlivl1"></a><span>3、 culture deficient cells</span></h3><h3 class="c4"><a name="h.ee824wmlivl1"></a><span>4、culture 18-3&11 in LB liquid medium </span></h3><h3 class="c4"><a name="h.ee824wmlivl1"></a><span>8.29</span></h3><h3 class="c4"><a name="h.ee824wmlivl1"></a><span>1、PCR :5&4 and leu</span></h3><h3 class="c4"><a name="h.awlrj81666pu"></a><span>PCR(ul)</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c17"><p class="c4"><span>ddH2O</span></p></td><td class="c17"><p class="c4"><span>dNTP</span></p></td><td class="c21"><p class="c4"><span>Buffer</span></p></td><td class="c17"><a href="#" name="id.bd219e189f6f"></a><p class="c4"><span>Primer-F</span></p></td><td class="c21"><p class="c4"><span>Primer-R</span></p></td><td class="c21"><p class="c4"><span>dna</span></p></td><td class="c21"><p class="c4"><span>Taq</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>39.5</span></p></td><td class="c17"><p class="c4"><span>2</span></p></td><td class="c21"><p class="c4"><span>5</span></p></td><td class="c17"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>1</span></p></td><td class="c21"><p class="c4"><span>0.5</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.cbhr3fgm4nrj"></a><span>2、Presrvation species of 18-3&11 and extract plasmid,measure density, digest</span></h3><h3 class="c4"><a name="h.cbhr3fgm4nrj"></a><span>density(1)19.5(2)130.5</span></h3><h3 class="c4"><a name="h.cbhr3fgm4nrj"></a><span>digestion</span></h3><h3 class="c4"><a name="h.p91mu85t6yz4"></a><span>single enzyme</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>(1)</span></p></td><td class="c9"><p class="c4"><span>(2)</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>6</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>BSA</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>2.65</span></p></td><td class="c9"><p class="c4"><span>7.65</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>XbaI</span></p></td><td class="c9"><p class="c4"><span>0.35</span></p></td><td class="c9"><p class="c4"><span>0.35</span></p></td></tr></tbody></table><p class="c4"><span>Double enzymes:</span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>(1)</span></p></td><td class="c9"><p class="c4"><span>(2)</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>6</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>BSA</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td><td class="c9"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>2.4</span></p></td><td class="c9"><p class="c4"><span>7.4</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>EcoRI</span></p></td><td class="c9"><p class="c4"><span>0.25</span></p></td><td class="c9"><p class="c4"><span>0.25</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>PstI</span></p></td><td class="c9"><p class="c4"><span>0.25</span></p></td><td class="c9"><p class="c4"><span>0.25</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.71fxa3curofb"></a><span>Check by small gel</span></h3><h3 class="c4"><a name="h.71fxa3curofb"></a><span>3、pick single colony of 5&4,leu,21&3,22&3,18-3&11-16 and culture in LB liquid medium。</span></h3><h3 class="c4"><a name="h.71fxa3curofb"></a><span>4、prepare TY medium 100ml</span></h3><h3 class="c4"><a name="h.71fxa3curofb"></a><span>8.30</span></h3><h3 class="c4"><a name="h.71fxa3curofb"></a><a href="#" name="id.e846d4e866ce"></a><span>1、Presrvation species of 5&4,leuB89,leuB13 and extract plasmid,measure density, digest</span></h3><h3 class="c4"><a name="h.71fxa3curofb"></a><span>density:</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c17"><p class="c4"><span>leuB13(1)</span></p></td><td class="c17"><a href="#" name="id.f54c4c23a77f"></a><p class="c4"><span>5&4(1)</span></p></td><td class="c21"><p class="c4"><span>5&4(2)</span></p></td><td class="c17"><p class="c4"><span>5&4(3)</span></p></td><td class="c21"><p class="c4"><span>leuB89(1)</span></p></td><td class="c21"><p class="c4"><span>leuB89(2)</span></p></td><td class="c21"><p class="c4"><span>leuB89(3)</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>24.5</span></p></td><td class="c17"><p class="c4"><span>188.0</span></p></td><td class="c21"><p class="c4"><span>62.0</span></p></td><td class="c17"><p class="c4"><span>132.0</span></p></td><td class="c21"><p class="c4"><span>6.8</span></p></td><td class="c21"><p class="c4"><span>3.1</span></p></td><td class="c21"><p class="c4"><span>10.8</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.6jtrl26b1tlv"></a><span>Digestion of 5&4</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>(1)</span></p></td><td class="c13"><p class="c4"><span>(2)</span></p></td><td class="c13"><p class="c4"><span>(3)</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DNA</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer3</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>ddH2O</span></p></td><td class="c5"><p class="c4"><span>7.5</span></p></td><td class="c13"><p class="c4"><span>6.5</span></p></td><td class="c13"><p class="c4"><span>7.5</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>BSA</span></p></td><td class="c5"><p class="c4"><span>0.1</span></p></td><td class="c13"><p class="c4"><span>0.1</span></p></td><td class="c13"><p class="c4"><span>0.1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>EcoRI</span></p></td><td class="c5"><p class="c4"><span>0.2</span></p></td><td class="c13"><p class="c4"><span>0.2</span></p></td><td class="c13"><p class="c4"><span>0.2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>PstI</span></p></td><td class="c5"><p class="c4"><span>0.2</span></p></td><td class="c13"><p class="c4"><span>0.2</span></p></td><td class="c13"><p class="c4"><span>0.2</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.9sbx477gdv2a"></a><span>Check by small gel</span></h3><h3 class="c4"><a name="h.9sbx477gdv2a"></a><span>Result:5&4 and leuB successfully ligate</span></h3><h1 class="c4"><a name="h.em1ctnutxs3l"></a><span>8.31</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.3gv9af27ikw"></a><span>1、did enzyme digestion to 2 part (with psB1AK2 carrier) and K115001 part(with psB1AT3 carrier) and run electrophoresis together with psB1C3. We recycled the carrier part by cutting the gel.</span></h3><h3 class="c4"><a name="h.3gv9af27ikw"></a><span>density:</span></h3><h3 class="c4"><a name="h.3gv9af27ikw"></a><span>2 part 37.5</span></h3><a href="#" name="id.a5fc2f8264e3"></a><h3 class="c4"><a name="h.3gv9af27ikw"></a><span>K115001 part 120</span></h3><h3 class="c4"><a name="h.p7f0i2i3brxd"></a><span>digestion(ul)</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>K115001</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>9</span></p></td><td class="c9"><p class="c4"><span>9</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>10*H Buffer</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>EcoRI</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>PstI</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>7</span></p></td><td class="c9"><p class="c4"><span>7</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.ox56qgmq045h"></a><span>9.1</span></h1><h3 class="c4"><a name="h.q4spboi6k88h"></a><span>1、prepare 0147TY medium</span></h3><h3 class="c4"><a name="h.q4spboi6k88h"></a><span>Tryptone 5.0g Yeast extract 3.0g CaCl.6H2O 1.3g Agar 15.0g Distilled water 1.0L</span></h3><h3 class="c4"><a name="h.q4spboi6k88h"></a><span>2、ligate 18-3&11-16 and 18-3&11</span></h3><h3 class="c4"><a name="h.q4spboi6k88h"></a><span>density:</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c10"><p class="c4"><span>18-3(1)</span></p></td><td class="c10"><p class="c4"><span>18-3(2)</span></p></td><td class="c10"><p class="c4"><span>11-16(1)</span></p></td><td class="c10"><p class="c4"><span>11-16(2)</span></p></td><td class="c10"><p class="c4"><span>K carrier(1)</span></p></td><td class="c10"><p class="c4"><span>K carrier(2)</span></p></td><td class="c16"><p class="c4"><span>AC(1)</span></p></td><td class="c16"><p class="c4"><span>AC(2)</span></p></td></tr><tr class="c12"><td class="c10"><p class="c4"><span>140</span></p></td><td class="c10"><p class="c4"><span>98</span></p></td><td class="c10"><p class="c4"><span>278.5</span></p></td><td class="c10"><p class="c4"><span>203.0</span></p></td><td class="c10"><p class="c4"><span>17.5</span></p></td><td class="c10"><p class="c4"><span>17.5</span></p></td><td class="c16"><p class="c4"><span>7.9</span></p></td><td class="c16"><p class="c4"><span>13.1</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.hedvpls048g0"></a><span>Digestion:<br></span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>18-3</span></p></td><td class="c13"><p class="c4"><span>11</span></p></td><td class="c13"><p class="c4"><span>11-16</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DNA</span></p></td><td class="c5"><p class="c4"><span>7</span></p></td><td class="c13"><p class="c4"><span>10</span></p></td><td class="c13"><p class="c4"><span>4</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer</span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>enzyme1</span></p></td><td class="c5"><p class="c4"><span>E 1</span></p></td><td class="c13"><p class="c4"><span>X 1</span></p></td><td class="c13"><p class="c4"><span>X 1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>enzyme 2</span></p></td><td class="c5"><p class="c4"><span>S 1</span></p></td><td class="c13"><p class="c4"><span>P 1</span></p></td><td class="c13"><p class="c4"><span>P 1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DdH2O</span></p></td><td class="c5"><p class="c4"><span>9</span></p></td><td class="c13"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>12</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.3yfownuunxbz"></a><span>Ligation:</span></h3><h3 class="c4"><a name="h.3yfownuunxbz"></a><span>18-3:3ul 16:1ul 2:6ul T4:1ul Buffer:2ul H2O:7ul</span></h3><h3 class="c29 c4"><a name="h.3yfownuunxbz"></a></h3><h3 class="c4"><a name="h.3yfownuunxbz"></a><span>18-3:3ul 11-16:4ul 2:6ul T4:1ul Buffer:2ul ddH2O:4ul</span></h3><h1 class="c4"><a name="h.tmngci922iwu"></a><span>9.2 </span></h1><h3 class="c4"><a name="h.wkppfbc5lyza"></a><span>1、Presrvation species of leuB and extract plasmid,measure density, digest</span></h3><h3 class="c4"><a name="h.wkppfbc5lyza"></a><span>density:</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><h3 class="c4"><a name="h.wkppfbc5lyza"></a><span>1</span></h3></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>3</span></p></td><td class="c13"><p class="c4"><span>4</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>292.5</span></p></td><td class="c5"><p class="c4"><span>21.5</span></p></td><td class="c13"><p class="c4"><span>223.5</span></p></td><td class="c13"><p class="c4"><span>32.0</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.bi0spzoaltti"></a><span>Digestion:</span></h1><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>leuB</span></p></td><td class="c9"><a href="#" name="id.d705116cf752"></a><p class="c4"><span>K(pSB1C3)</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>EcoRI</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>PstI</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>14</span></p></td><td class="c9"><p class="c4"><span>8.5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>7.5</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.9sfoto1zfgis"></a><span>Check by small gel:</span></h3><p class="c2"><span></span></p><h3 class="c4"><a name="h.bjhs1az2y57t"></a><span>recover:</span></h3><h3 class="c4"><a name="h.bjhs1az2y57t"></a><span>2、pick single colony of 18-3&11-16 and 18-3&11 and culture in shaker</span></h3><h3 class="c4"><a name="h.bjhs1az2y57t"></a><span>3、transform BBa_I751250,as LuxI_AHL producer。Transform BBa_J04450(placI+mRFP)</span></h3><h3 class="c4"><a name="h.bjhs1az2y57t"></a><span>9.3</span></h3><h3 class="c4"><a name="h.bjhs1az2y57t"></a><span>1、ligate leuB, K(pSB1C3) carrier and transform</span></h3><h3 class="c4"><a name="h.bjhs1az2y57t"></a><span>density:</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>Before Concentration</span></p></td><td class="c9"><p class="c4"><span>After Concentration</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>LeuB</span></p></td><td class="c9"><p class="c4"><span>15</span></p></td><td class="c9"><p class="c4"><span>36</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>pSB1C3</span></p></td><td class="c9"><p class="c4"><span>8</span></p></td><td class="c9"><p class="c4"><span>25</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.6ii9ncjvqxui"></a><span>ligation</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>LeuB</span></p></td><td class="c1"><p class="c4"><span>Psb1c3</span></p></td><td class="c1"><p class="c4"><span>T4</span></p></td><td class="c1"><p class="c4"><span>Buffer</span></p></td><td class="c1"><p class="c4"><span>DdH2O</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>7</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.im43403pxmes"></a><span>2、extract plasmid of 8-3&11-16 and 18-3&11, digest,and check by small gel</span></h3><h3 class="c4"><a name="h.im43403pxmes"></a><span>Density:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c34"><p class="c4"><span>18-3&11-161</span></p></td><td class="c34"><p class="c4"><span>18-3&11-162</span></p></td><td class="c18"><p class="c4"><span>18-3&11 1</span></p></td><td class="c18"><a href="#" name="id.ad39c9b90daa"></a><p class="c4"><span>18-3&11 2</span></p></td><td class="c52"><p class="c4"><span>5-4(AC)1 </span></p></td><td class="c56"><p class="c4"><span>5-4(AC) 2</span></p></td><td class="c53"><p class="c4"><span>2-6-3</span></p></td></tr><tr class="c12"><td class="c34"><p class="c4"><span>265</span></p></td><td class="c34"><p class="c4"><span>242</span></p></td><td class="c18"><p class="c4"><span>192</span></p></td><td class="c18"><p class="c4"><span>217.5</span></p></td><td class="c52"><p class="c4"><span>193</span></p></td><td class="c56"><p class="c4"><span>72</span></p></td><td class="c53"><p class="c4"><span>63.5</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.qevj1yc7kkwj"></a><span>digestion:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>18-3&11-16(1)</span></p></td><td class="c1"><p class="c4"><span>18-3&11-16(2)</span></p></td><td class="c1"><p class="c4"><span>18-3&11(1)</span></p></td><td class="c1"><p class="c4"><span>18-3&11(2)</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>DNA</span></p></td><td class="c1"><p class="c4"><span>3.5</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>5</span></p></td><td class="c1"><p class="c4"><span>4.5</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>Buffer</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>EcoRI</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>PstI</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>ddH2O</span></p></td><td class="c1"><p class="c4"><span>12.5</span></p></td><td class="c1"><p class="c4"><span>12</span></p></td><td class="c1"><p class="c4"><span>11</span></p></td><td class="c1"><p class="c4"><span>11.5</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.s7dxsac1fmjh"></a><span>Check by gel:</span></h3><p class="c2"><span></span></p><h3 class="c4"><a name="h.f5jqe09y4j66"></a><span>2、ligate 5-4&2-6-3</span></h3><h3 class="c4"><a name="h.6o1u60ekkzdx"></a><span>ligation</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>K</span></p></td><td class="c0"><p class="c4"><span>5-4</span></p></td><td class="c0"><p class="c4"><span>2-6-3</span></p></td><td class="c0"><p class="c4"><span>T4连接酶</span></p></td><td class="c6"><p class="c4"><span>Buffer</span></p></td><td class="c6"><p class="c4"><span>DdH2O</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>6</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c0"><p class="c4"><span>2</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>2</span></p></td><td class="c6"><p class="c4"><span>5</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.h3yoy287vb0g"></a><span>9.4</span></h1><h3 class="c4"><a name="h.djojukljacfp"></a><span>1、transform 5-4&2-6-3,extract plasmid of 2-6-3与2</span></h3><h3 class="c4"><a name="h.djojukljacfp"></a><span>2、transform Pea Rhizobium</span></h3><h3 class="c4"><a name="h.djojukljacfp"></a><span>9.5</span></h3><h3 class="c4"><a name="h.djojukljacfp"></a><span>1、Presrvation species of leuB and extract plasmid,measure density, digest, PCR ,check by gel</span></h3><h3 class="c4"><a name="h.djojukljacfp"></a><span>PCR</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c2"><span></span></p></td><td class="c0"><p class="c2"><span></span></p></td><td class="c0"><p class="c2"><span></span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>2</span></p></td><td class="c6"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>ddH2O</span></p></td><td class="c0"><p class="c4"><span>37.5</span></p></td><td class="c0"><p class="c4"><span>37</span></p></td><td class="c0"><p class="c4"><span>36.5</span></p></td><td class="c6"><p class="c4"><span>36.5</span></p></td><td class="c6"><p class="c4"><span>36.5</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>dNTPmix</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c0"><p class="c4"><span>4</span></p></td><td class="c6"><p class="c4"><span>4</span></p></td><td class="c6"><p class="c4"><span>4</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>Buffer</span></p></td><td class="c0"><p class="c4"><span>5</span></p></td><td class="c0"><p class="c4"><span>5</span></p></td><td class="c0"><p class="c4"><span>5</span></p></td><td class="c6"><p class="c4"><span>5</span></p></td><td class="c6"><p class="c4"><span>5</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>VF2</span></p></td><td class="c0"><p class="c4"><span>1.5</span></p></td><td class="c0"><p class="c4"><span>1.5</span></p></td><td class="c0"><p class="c4"><span>1.5</span></p></td><td class="c6"><p class="c4"><span>1.5</span></p></td><td class="c6"><p class="c4"><span>1.5</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>VR</span></p></td><td class="c0"><p class="c4"><span>1.5</span></p></td><td class="c0"><p class="c4"><span>1.5</span></p></td><td class="c0"><p class="c4"><span>1.5</span></p></td><td class="c6"><p class="c4"><span>1.5</span></p></td><td class="c6"><p class="c4"><span>1.5</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>tamplate</span></p></td><td class="c0"><p class="c4"><span>0</span></p></td><td class="c0"><p class="c4"><span>0.5</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>Taq</span></p></td><td class="c0"><p class="c4"><span>0.5</span></p></td><td class="c0"><p class="c4"><span>0.5</span></p></td><td class="c0"><p class="c4"><span>0.5</span></p></td><td class="c6"><p class="c4"><span>0.5</span></p></td><td class="c6"><p class="c4"><span>0.5</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.4vezb87sj3gs"></a><span>Check by gel </span></h3><p class="c4"><img height="527" src="images/image02.jpg" width="527"></p><h3 class="c4"><a name="h.72c4zg6pthgu"></a><span>digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span>LeuB 1</span></p></td><td class="c9"><p class="c4"><span>LeuB 3</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA</span></p></td><td class="c9"><p class="c4"><span>3</span></p></td><td class="c9"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>BufferM</span></p></td><td class="c9"><p class="c4"><span>0.5</span></p></td><td class="c9"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O</span></p></td><td class="c9"><p class="c4"><span>1.1</span></p></td><td class="c9"><p class="c4"><span>1.1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>SpeI</span></p></td><td class="c9"><p class="c4"><span>0.2</span></p></td><td class="c9"><p class="c4"><span>0.2</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>XbaI</span></p></td><td class="c9"><p class="c4"><span>0.2</span></p></td><td class="c9"><p class="c4"><span>0.2</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.prk8j67a3erf"></a><span>Check by gel </span></h3><h1 class="c4"><a name="h.ftq4x9fezl9p"></a><span>9.6</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.tzu0yabpanct"></a><span>1、Presrvation species of 54263 and extract plasmid, digest, PCR ,check by gel</span></h3><h3 class="c29 c4"><a name="h.tzu0yabpanct"></a></h3><h3 class="c4"><a name="h.3i6aolmrnp3z"></a><span>digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DNA</span></p></td><td class="c5"><p class="c4"><span>1.4</span></p></td><td class="c13"><p class="c4"><span>1.4</span></p></td><td class="c13"><p class="c4"><span>1.7</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer</span></p></td><td class="c5"><p class="c4"><span>0.5</span></p></td><td class="c13"><p class="c4"><span>0.5</span></p></td><td class="c13"><p class="c4"><span>0.5</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DdH2O</span></p></td><td class="c5"><p class="c4"><span>2.5</span></p></td><td class="c13"><p class="c4"><span>2.5</span></p></td><td class="c13"><p class="c4"><span>2.2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>EcoRI</span></p></td><td class="c5"><p class="c4"><span>0.3</span></p></td><td class="c13"><p class="c4"><span>0.3</span></p></td><td class="c13"><p class="c4"><span>0.3</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>PstI</span></p></td><td class="c5"><p class="c4"><span>0.3</span></p></td><td class="c13"><p class="c4"><span>0.3</span></p></td><td class="c13"><p class="c4"><span>0.3</span></p></td></tr></tbody></table><h1 class="c49 c4"><a name="h.woe6zwxsksvp"></a></h1><h1 class="c4"><a name="h.7wkxrcs7xpbv"></a><span>9.7</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.uxiz6xa9xofa"></a><span>1、measure OD of Deficient cell</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c2"><span></span></p></td><td class="c0"><p class="c4"><span>MM(leuB-)</span></p></td><td class="c0"><p class="c4"><span>1 leuB+</span></p></td><td class="c0"><p class="c4"><span>2 leuB+</span></p></td><td class="c6"><p class="c4"><span>3 leuB+</span></p></td><td class="c6"><p class="c4"><span>4 leuB+</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>OD(A340)</span></p></td><td class="c0"><p class="c4"><span>1.611-1</span></p></td><td class="c0"><p class="c4"><span>1.698-1</span></p></td><td class="c0"><p class="c4"><span>1.818-1</span></p></td><td class="c6"><p class="c4"><span>1.548-1</span></p></td><td class="c6"><p class="c4"><span>1.881-1</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.w97sjfemswol"></a><span>2、digest leuB、③、K115001</span></h3><h3 class="c4"><a name="h.mfs7a181f07r"></a><span>digestion:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c26"><p class="c2"><span></span></p></td><td class="c30"><p class="c4"><span>8</span></p></td><td class="c25"><p class="c4"><span>6</span></p></td><td class="c46"><p class="c4"><span>LeuB</span></p></td><td class="c30"><p class="c4"><span>3</span></p></td><td class="c24"><p class="c4"><span>T1</span></p></td><td class="c26"><p class="c4"><span>T2</span></p></td><td class="c24"><p class="c4"><span>T3</span></p></td></tr><tr class="c12"><td class="c26"><p class="c4"><span>DNA</span></p></td><td class="c30"><p class="c4"><span>9</span></p></td><td class="c25"><p class="c4"><span>9</span></p></td><td class="c46"><p class="c4"><span>10</span></p></td><td class="c30"><p class="c4"><span>10</span></p></td><td class="c24"><p class="c4"><span>10</span></p></td><td class="c26"><p class="c4"><span>13</span></p></td><td class="c24"><p class="c4"><span>12</span></p></td></tr><tr class="c12"><td class="c26"><p class="c4"><span>Buffer</span></p></td><td class="c30"><p class="c4"><span>2</span></p></td><td class="c25"><p class="c4"><span>2</span></p></td><td class="c46"><p class="c4"><span>2</span></p></td><td class="c30"><p class="c4"><span>2</span></p></td><td class="c24"><p class="c4"><span>2</span></p></td><td class="c26"><p class="c4"><span>2</span></p></td><td class="c24"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c26"><p class="c4"><span>DdH2O</span></p></td><td class="c30"><p class="c4"><span>7</span></p></td><td class="c25"><p class="c4"><span>6.6</span></p></td><td class="c46"><p class="c4"><span>5.6</span></p></td><td class="c30"><p class="c4"><span>5.6</span></p></td><td class="c24"><p class="c4"><span>5.6</span></p></td><td class="c26"><p class="c4"><span>2.6</span></p></td><td class="c24"><p class="c4"><span>3.6</span></p></td></tr><tr class="c12"><td class="c26"><p class="c4"><span>EcoRI</span></p></td><td class="c30"><p class="c4"><span>1</span></p></td><td class="c25"><p class="c4"><span>1.2</span></p></td><td class="c46"><p class="c4"><span>1.2</span></p></td><td class="c30"><p class="c4"><span>1.2</span></p></td><td class="c24"><p class="c4"><span>1.2</span></p></td><td class="c26"><p class="c4"><span>1.2</span></p></td><td class="c24"><p class="c4"><span>1.2</span></p></td></tr><tr class="c12"><td class="c26"><p class="c4"><span>SpeI</span></p></td><td class="c30"><p class="c4"><span>1</span></p></td><td class="c25"><p class="c4"><span>1.2</span></p></td><td class="c46"><p class="c4"><span>1.2</span></p></td><td class="c30"><p class="c4"><span>1.2</span></p></td><td class="c24"><p class="c4"><span>1.2</span></p></td><td class="c26"><p class="c4"><span>1.2</span></p></td><td class="c24"><p class="c4"><span>1.2</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.5mlvofbvkc4i"></a><span>density:</span></h3><h3 class="c4"><a name="h.5mlvofbvkc4i"></a><span>LeuB 98.0</span></h3><h3 class="c4"><a name="h.5mlvofbvkc4i"></a><span>T 1:93.5 2:73.5 3:87</span></h3><h3 class="c4"><a name="h.5mlvofbvkc4i"></a><span>3 1:97 2:73 3:82</span></h3><h3 class="c4"><a name="h.5mlvofbvkc4i"></a><span>9.8</span></h3><h3 class="c4"><a name="h.5mlvofbvkc4i"></a><span>1、extract plasmid of 6,and digest with LeuB</span></h3><h3 class="c4"><a name="h.9dqcvm6xpq2y"></a><span>Density of 6:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>1</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>57</span></p></td><td class="c9"><p class="c4"><span>68</span></p></td><td class="c9"><p class="c4"><span>50</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.ufa9zdoc4n5v"></a><span>digestion</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>LeuB</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DNA</span></p></td><td class="c5"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>10</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer</span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DdH2O</span></p></td><td class="c5"><p class="c4"><span>9.6</span></p></td><td class="c13"><p class="c4"><span>9.6</span></p></td><td class="c13"><p class="c4"><span>5.6</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>EcoRI</span></p></td><td class="c5"><p class="c4"><span>1.2</span></p></td><td class="c13"><p class="c4"><span>1.2</span></p></td><td class="c13"><p class="c4"><span>1.2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>SpeI</span></p></td><td class="c5"><p class="c4"><span>1.2</span></p></td><td class="c13"><p class="c4"><span>1.2</span></p></td><td class="c13"><p class="c4"><span>1.2</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.tgspjxa7cy05"></a><span>2、ligate leuB&3</span></h3><h3 class="c4"><a name="h.tgspjxa7cy05"></a><span>ligation:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>T4</span></p></td><td class="c0"><p class="c4"><span>Buffer</span></p></td><td class="c0"><p class="c4"><span>leuB</span></p></td><td class="c0"><p class="c4"><span>3</span></p></td><td class="c6"><p class="c4"><span>T carrier</span></p></td><td class="c6"><p class="c4"><span>DdH2O</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>2</span></p></td><td class="c0"><p class="c4"><span>3</span></p></td><td class="c0"><p class="c4"><span>0.7</span></p></td><td class="c6"><p class="c4"><span>10</span></p></td><td class="c6"><p class="c4"><span>3.3</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.2tn7lcrp7780"></a><span>9.9</span></h1><h3 class="c4"><a name="h.ix5rjouwfyue"></a><span>1、check 6, leuB, 8</span></h3><h3 class="c4"><a name="h.ix5rjouwfyue"></a><span>Gel:</span></h3><h3 class="c4"><a name="h.ix5rjouwfyue"></a><span>Ligate 8&6、6&leuB</span></h3><h3 class="c4"><a name="h.jizjvyn0z6vd"></a><span>Ligation of 8&6:</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>T carrier</span></p></td><td class="c0"><p class="c4"><span>8</span></p></td><td class="c0"><p class="c4"><span>6</span></p></td><td class="c0"><p class="c4"><span>T4</span></p></td><td class="c6"><p class="c4"><span>Buffer</span></p></td><td class="c6"><p class="c4"><span>DdH2O</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>10</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>2</span></p></td><td class="c6"><p class="c4"><span>5</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.sojo5w7w5q9c"></a><span>Ligation of 6&leuB</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>T carrier</span></p></td><td class="c0"><p class="c4"><span>6</span></p></td><td class="c0"><p class="c4"><span>LeuB</span></p></td><td class="c0"><p class="c4"><span>T4</span></p></td><td class="c6"><p class="c4"><span>Buffer</span></p></td><td class="c6"><p class="c4"><span>DdH2O</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>10</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>3</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>2</span></p></td><td class="c6"><p class="c4"><span>3</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.vnbfx386r4a2"></a><span>9.10</span></h1><h3 class="c4"><a name="h.90ycqjb04vb7"></a><span>1、transform 8&6 and leuB</span></h3><h3 class="c4"><a name="h.90ycqjb04vb7"></a><span>2、culture leuB&3 in LB medium</span></h3><h3 class="c4"><a name="h.90ycqjb04vb7"></a><span>3、device checking:</span></h3><h3 class="c4"><a name="h.90ycqjb04vb7"></a><span>Device1 has strong Fluorescent and device 2 hasslight one</span></h3><h3 class="c4"><a name="h.90ycqjb04vb7"></a><span>Picture:</span></h3><h1 class="c4 c49"><a name="h.1ummjyzat1wc"></a></h1><h1 class="c4"><a name="h.p1bniw9xi6lt"></a><span>9.11</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.j1mlghz0dpg9"></a><span>1、PCR:sinR、pro-RBS-sinR、raiR、raiR-pro</span></h3><p class="c2"><span></span></p><h3 class="c4"><a name="h.fcdrc1dlv06o"></a><span>density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c37"><p class="c4"><span>sinI</span></p></td><td class="c37"><p class="c4"><span>12.8</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>SinI pro</span></p></td><td class="c37"><p class="c4"><span>9.6</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>Pro-RBS-sinI</span></p></td><td class="c37"><p class="c4"><span>15.1</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>RaiI</span></p></td><td class="c37"><p class="c4"><span>14.2</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>RaiI pro</span></p></td><td class="c37"><p class="c4"><span>9.4</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>Pro-RBS-raiI</span></p></td><td class="c37"><p class="c4"><span>11.4</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>SinR pro</span></p></td><td class="c37"><p class="c4"><span>11.5</span></p></td></tr><tr class="c12"><td class="c37"><p class="c4"><span>Pro-RBS-raiR</span></p></td><td class="c37"><p class="c4"><span>15.0</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.ko2zysom0iot"></a><span>2、pick single colony of 6&leuB</span></h3><h3 class="c4"><a name="h.ko2zysom0iot"></a><span>9.12</span></h3><h3 class="c4"><a name="h.ko2zysom0iot"></a><span>1、digest 21、22 and ligate</span></h3><h3 class="c4"><a name="h.ko2zysom0iot"></a><span>digestion</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>21</span></p></td><td class="c13"><p class="c4"><span>22</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer</span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>NDA</span></p></td><td class="c5"><p class="c4"><span>13.6</span></p></td><td class="c13"><p class="c4"><span>15</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DdH2O</span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>0.6</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>EcoRI</span></p></td><td class="c5"><p class="c4"><span>1.2</span></p></td><td class="c13"><p class="c4"><span>1.2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>SpeI</span></p></td><td class="c5"><p class="c4"><span>1.2</span></p></td><td class="c13"><p class="c4"><span>1.2</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.7q3di5col2wi"></a><span>ligation</span></h3><h3 class="c4"><a name="h.7q3di5col2wi"></a><span>21&3</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>21</span></p></td><td class="c0"><p class="c4"><span>3</span></p></td><td class="c0"><p class="c4"><span>Buffer </span></p></td><td class="c0"><p class="c4"><span>T4</span></p></td><td class="c6"><p class="c4"><span>DdH2O</span></p></td><td class="c6"><p class="c4"><span>T</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>3</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>2</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>3</span></p></td><td class="c6"><p class="c4"><span>10</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.8g2gy677wg7m"></a><span>22&3</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c0"><p class="c4"><span>22</span></p></td><td class="c0"><p class="c4"><span>3</span></p></td><td class="c0"><p class="c4"><span>Buffer</span></p></td><td class="c0"><p class="c4"><span>T4</span></p></td><td class="c6"><p class="c4"><span>DdH2O</span></p></td><td class="c6"><p class="c4"><span>T</span></p></td></tr><tr class="c12"><td class="c0"><p class="c4"><span>5</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c0"><p class="c4"><span>2</span></p></td><td class="c0"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>1</span></p></td><td class="c6"><p class="c4"><span>10</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.78fosknlspxo"></a><span>2、extract plasmid of leuB-6 and measure density</span></h3><h3 class="c4"><a name="h.78fosknlspxo"></a><span>density:16.5</span></h3><h1 class="c4"><a name="h.z2gmdjiy1hon"></a><span>9.13</span></h1><h3 class="c4"><a name="h.slxf8ucbmfw5"></a><span>1、transform and culture 21&3,22&3,8&6,recover PSB1C3 carrier</span></h3><h3 class="c4"><a name="h.xnxdtzar9e2f"></a><span>2.Pcr</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c17"><p class="c4"><span>ddH2O</span></p></td><td class="c17"><p class="c4"><span>Pfu with MgSO4 buffer</span></p></td><td class="c21"><p class="c4"><span>dNTP</span></p></td><td class="c17"><p class="c4"><span>PF</span></p></td><td class="c21"><p class="c4"><span>PR</span></p></td><td class="c21"><p class="c4"><span>Template</span></p></td><td class="c21"><p class="c4"><span>Pfu</span></p></td></tr><tr class="c12"><td class="c17"><p class="c4"><span>38</span><span class="c3">µ</span><span>l</span></p></td><td class="c17"><p class="c4"><span>5</span><span class="c3">µ</span><span>l</span></p></td><td class="c21"><p class="c4"><span>4</span><span class="c3">µ</span><span>l</span></p></td><td class="c17"><p class="c4"><span>1</span><span class="c3">µ</span><span>l</span></p></td><td class="c21"><p class="c4"><span>1</span><span class="c3">µ</span><span>l</span></p></td><td class="c21"><p class="c4"><span>0.5</span><span class="c3">µ</span><span>l</span></p></td><td class="c21"><p class="c4"><span>0.5</span><span class="c3">µ</span><span>l</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.vyykrtrhy0we"></a><span>Results:failed</span></h3><h3 class="c4"><a name="h.vyykrtrhy0we"></a><span>3.digest sinR, sinI,pro- sinI</span></h3><h3 class="c4"><a name="h.2kxssry4fo1d"></a><span>Digestion:20</span><span class="c3">µ</span><span>l</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c2"><span></span></p></td><td class="c5"><p class="c4"><span>sinR</span></p></td><td class="c13"><p class="c4"><span>sinI</span></p></td><td class="c13"><p class="c4"><span>pro- sinI</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DNA</span></p></td><td class="c5"><p class="c4"><span>10</span></p></td><td class="c13"><p class="c4"><span>11</span></p></td><td class="c13"><p class="c4"><span>16</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer 10</span><span class="c3">×</span><span>H</span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>ddH2O</span></p></td><td class="c5"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>5</span></p></td><td class="c13"><p class="c4"><span>0</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>EcoRI</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>PstI</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.3n89uor9jv7a"></a><span>9.15</span></h1><h3 class="c4"><a name="h.mwd71ak11zm"></a><span>Digestion of Leu&3 :20</span><span class="c3">µ</span><span>l</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c5"><p class="c4"><span>number</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>3</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>DNA(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c5"><p class="c4"><span>10</span></p></td><td class="c13"><p class="c4"><span>10</span></p></td><td class="c13"><p class="c4"><span>9</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>Buffer 10</span><span class="c3">×</span><span>H(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c5"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td><td class="c13"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span>ddH2O(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c5"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>6</span></p></td><td class="c13"><p class="c4"><span>7</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span class="c7">Xba</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td></tr><tr class="c12"><td class="c5"><p class="c4"><span class="c7">Pst</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c5"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td><td class="c13"><p class="c4"><span>1</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.s3eqhw38nr24"></a><span>9.16</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.8um0wy4nrt8u"></a><span>Digest 6 and leub</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>number</span></p></td><td class="c9"><p class="c4"><span>6</span></p></td><td class="c9"><p class="c4"><span>Leu</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>DNA(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c9"><p class="c4"><span>15</span></p></td><td class="c9"><p class="c4"><span>9</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>Buffer 10</span><span class="c3">×</span><span>M(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>ddH2O(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c9"><p class="c4"><span>2</span></p></td><td class="c9"><p class="c4"><span>7</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>enzymew</span></p></td><td class="c9"><p class="c4"><span class="c7">Spe</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l) </span><span class="c3">1</span></p></td><td class="c9"><p class="c4"><span class="c7">Xba</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l) 1</span></p></td></tr><tr class="c12"><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c2"><span></span></p></td><td class="c9"><p class="c4"><span class="c7">Pst</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l) 1</span></p></td></tr></tbody></table><h1 class="c4"><a name="h.5jlkua87etap"></a><span>9.18</span></h1><h3 class="c4"><a name="h.wll2rnwql4h5"></a><span>Ligate Leu and 6 using 3A</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c2"><span></span></p></td><td class="c1"><p class="c4"><span>Leu</span></p></td><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>buffer</span></p></td><td class="c1"><p class="c4"><span>T4</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>10</span><span class="c3">µ</span><span>l</span></p></td><td class="c1"><p class="c4"><span class="c3">2µ</span><span>l</span></p></td><td class="c1"><p class="c4"><span class="c3">6µ</span><span>l</span></p></td><td class="c1"><p class="c4"><span class="c3">2µ</span><span>l</span></p></td><td class="c1"><p class="c4"><span class="c3">1µ</span><span>l</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.8d09k2ryw264"></a><span>Gel picture:</span></h3><p class="c4"><img height="273" src="images/image03.jpg" width="562"></p><h3 class="c4"><a name="h.pzff1yr1mq6n"></a><span>Digest 6</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>number</span></p></td><td class="c1"><p class="c4"><span>DNA(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c4"><span>Buffer 10</span><span class="c3">×</span><span> (</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c4"><span class="c7">Pst</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c4"><span>ddH2O(</span><span class="c3">µ</span><span>l)</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>9</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>8</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.rjhja6hena4r"></a><span>9.20</span></h1><p class="c2"><span></span></p><h3 class="c4"><a name="h.doclcz4jf63n"></a><span>Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c38"><p class="c4"><span>number</span></p></td><td class="c50"><p class="c4"><span class="c27 c3">n</span><span class="c27 c7">g/</span><span class="c27 c3">µ</span><span class="c27 c7">l</span></p></td><td class="c50"><p class="c4"><span class="c7">A260</span><span class="c3">∕</span><span class="c7">A280</span></p></td></tr><tr class="c12"><td class="c38"><p class="c4"><span>6</span></p></td><td class="c50"><p class="c4"><span>179.5</span></p></td><td class="c50"><p class="c4"><span>1.851</span></p></td></tr><tr class="c12"><td class="c38"><p class="c4"><span>pSB1C3-1</span></p></td><td class="c50"><p class="c4"><span>6.3</span></p></td><td class="c50"><p class="c2"><span></span></p></td></tr><tr class="c12"><td class="c38"><p class="c4"><span>pSB1C3-2</span></p></td><td class="c50"><p class="c4"><span>8.6</span></p></td><td class="c50"><p class="c4"><span>3.510</span></p></td></tr><tr class="c12"><td class="c38"><p class="c4"><span>pSB1C3-3</span></p></td><td class="c50"><p class="c4"><span>5.1</span></p></td><td class="c50"><p class="c2"><span></span></p></td></tr></tbody></table><p class="c2"><span></span></p><h3 class="c4"><a name="h.xbnykbw91qca"></a><span>Digest Leu</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>DNA(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c4"><span>Buffer 10</span><span class="c3">×</span><span>M(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c19 c4"><span>ddH2O(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c4"><span class="c7">Pst</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l)</span></p></td><td class="c1"><p class="c4"><span class="c7">Xba</span><span class="c3">Ⅰ</span><span>(</span><span class="c3">µ</span><span>l)</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>8</span></p></td></tr></tbody></table><h3 class="c4"><a name="h.ebm9jwpwvzye"></a><span>Ligate Leu& 6</span></h3><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c1"><p class="c4"><span>Leu</span></p></td><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>buffer</span></p></td><td class="c1"><p class="c4"><span>T4</span></p></td><td class="c1"><p class="c4"><span>ddH2O</span></p></td></tr><tr class="c12"><td class="c1"><p class="c4"><span>6</span></p></td><td class="c1"><p class="c4"><span>4</span></p></td><td class="c1"><p class="c4"><span>2</span></p></td><td class="c1"><p class="c4"><span>1</span></p></td><td class="c1"><p class="c4"><span>7</span></p></td></tr></tbody></table><p class="c2"><span></span></p><h1 class="c4"><a name="h.gx5ptw3fqhxn"></a><span>9.21</span></h1><h3 class="c4"><a name="h.t4pz3r81wrf0"></a><span>Measure density</span></h3><p class="c2"><span></span></p><table cellpadding="0" cellspacing="0" class="c28"><tbody><tr class="c12"><td class="c9"><p class="c4"><span>number</span></p></td><td class="c9"><p class="c4"><span class="c27 c3">n</span><span class="c27 c7">g/</span><span class="c27 c3">µ</span><span class="c27 c7">l</span></p></td><td class="c9"><p class="c4"><span class="c7">A260</span><span class="c3">∕</span><span class="c7">A280</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>rai</span><span class="c3">Ⅰ</span><span>pro-3</span></p></td><td class="c9"><p class="c4"><span>29.5</span></p></td><td class="c9"><p class="c4"><span>1.666</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>rai</span><span class="c3">Ⅰ</span><span>pro-2</span></p></td><td class="c9"><p class="c4"><span>28.5</span></p></td><td class="c9"><p class="c4"><span>1.885</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>rai</span><span class="c3">Ⅰ</span><span>pro-1</span></p></td><td class="c9"><p class="c4"><span>23.0</span></p></td><td class="c9"><p class="c4"><span>1.818</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>C0076</span></p></td><td class="c9"><p class="c4"><span>161.0</span></p></td><td class="c9"><p class="c4"><span>1.793</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>E0020e0fp-1</span></p></td><td class="c9"><p class="c4"><span>28.5</span></p></td><td class="c9"><p class="c4"><span>1.676</span></p></td></tr><tr class="c12"><td class="c9"><p class="c4"><span>E0020e0fp-2</span></p></td><td class="c9"><p class="c4"><span>19.5</span></p></td><td class="c9"><p class="c4"><span>2.19 |
Latest revision as of 02:34, 29 October 2011
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7.21
I Prepare medium
1.soc medium
2.LB medium
3.LBliquid medium
II transform 2011 parts –OUC Order 1 to 3
III pick up a tested single colony
7.22
1.Extract plasmid of the practicing part
2. Measure density using distilled water as comparison
A260/A280 | A260/A230 | density(ng/ul) | |
1 | 1.892 | 2.115 | 0.035 |
2 | 1.841 | 1.227 | 0.0405 |
3 | 2.299 | 4.054 | 0.030 |
3. Digestion for 3 hours
1 | 2 | 3 | 4(Single enzyme cut) | |
DNA(ul) | 15 | 15 | 15 | 15 |
Buffer2(ul) | 5 | 5 | 5 | 5 |
Bsa(ul) | 0.5 | 0.5 | 0.5 | ----- |
Double-distilled water(ul) | 27.5 | 27.5 | 27.5 | 29 |
EcoR I(ul) | 1 | 1 | 1 | 1 |
Pst I(ul) | 1 | 1 | 1 | ------- |
Time(h) | 3 | 3 | 3 | 3 |
4.check by Electrophoresis
1、2、3:double enzyme,4、5、6:Single enzyme ,7:plasmid
5.transform 7new parts(number:4-10)
6.culture bacteria on LB medium
7.culture 3 new parts in Shaker
7.24
1. Presrvation species of parts No. ,4,5,6,7,8,9,10
2. Extract plasmid of 4,5,6,7,8,9,10
3.check through double enzyme Digestion
7.25
1. Measure density
5 | 0.020µg/µl |
4 | 0.012µg/µl |
6 | 0.020µg/µl |
2 | 0.015µg/µl |
2. Digestion
5 | 4 | 6 | 2 | |
DNA | 25 | 30 | 25 | 25 |
Buffer2 | 5 | 5 | 5 | 5 |
BSA | 0.5 | 0.5 | 0.5 | 0.5 |
H2O | 17.5 | 12.5 | 17.5 | 17.5 |
enzyme1 | EcoRⅠ1µl | EcoRⅠ1µl | SpeⅠ1µl | XbaⅠ1µl |
Enzyme2 | SpeⅠ1µl | XbaⅠ1µl | PstⅠ1µl | PstⅠ1µl |
3.check by Electrophoresis
4.gel extraction
5.measure density
OUC-order | 5 | 4 | 6 | 2 |
Density ug/µl | 0.016 | 0.021 | 0.027 | 0.028 |
6. Ligate overnight
1 | 2 | |
Parts | 2µl 5+3µl 4 | 3µl 2+3µl 6 |
Buffer | 2µl | 2µl |
enzyme | 1µl | 1µl |
DdH2O | 2µl | 1µl |
7.28
Repeat the ligation expriments of 7.25
7.29
Extract plasmids of parts No. 11,12,13,14
7.30
Medium has antibiotic resistance problem, re-transform 11\12\13\14
7.31
1.cultrue bacteria of 11,12,13,14 in LB liquid medium
2. Extract plasmid of 15,16,17,18,19,20,21,22
3. Optimization the Steps of Extracting plasmid
4.Chloramphericol preparing
5. NaAC’s DNA concentration
8.1
1. Extract plasmid of 11-14 and Measure density
ng/µl | A260∕A280 | |
11 | 12.7 | 1.917 |
12 | 10.3 | 1.981 |
13 | 35.5 | 1.919 |
14 | 15.7 | 1.975 |
2. Extract plasmid of No.5,4,6,2,15-20 parts
3.culture the colony of GFP on LB medium
8.2
Measure density of 15-22,2,4,5,6
Parts | µg/µl | A260∕A280 |
2 | 0.038 | 1.875 |
4 | 0.019 | 1.298 |
5 | 0.022 | 1.538 |
6 | 0.020 | 1.702 |
15 | 0.012 | 1.237 |
16 | 0.024 | 1.649 |
17 | 0.018 | 1.731 |
18 | 0.015 | 1.470 |
21 | 0.017 | 1.538 |
8.3
1. Concentrate plasmid using alcohol and NaAC
2. Measure density after concentrating
ng/µl | A260∕A280 | |
2 | 103 | 1.807 |
4 | 33 | 1.811 |
5 | 56 | 1.836 |
6 | 41 | 1.745 |
8.4
Digestion
Double enzymes | Single enzyme | |||
Parts | 5 | 2 | 4 | 6 |
DNA | 25 | 13 | 27 | 25 |
Buffer | 5 | 5 | 5 | 5 |
BSA | 0.5 | 0.5 | 0.5 | 0.5 |
ddH2O | 16.5 | 28.5 | 16.5 | 18.5 |
enzyme | EcoRⅠ 1.5 | XbaⅠ1.5 | XbaⅠ1 | SpeⅠ1 |
SpeⅠ1.5 | PstⅠ1.5 |
Parts | 4 | 6 |
DNA | 28.5 | 30 |
Buffer | EcoRⅠbuffer 5 | Buffer3 5 |
BSA | 0.5 | |
ddH2O | 15.5 | 13.5 |
enzyme | EcoRⅠ1 | PstⅠ1 |
8.5
1. Begin device 2
2. Design experimental procedures:
3. First construction with parts of device 2
8.6
2+6 successfully ligate
Measure density
Parts | µg/µl | A260∕A280 |
3 | 0.085 | 1.910 |
16 | 0.119 | 1.867 |
18 | 0.019 | 2.033 |
Measure density after concentrating
Parts | µg/µl | A260∕A280 |
18 | 0.0605 | 1.921 |
11 | 0.0335 | 2.107 |
Digestion
Double enzymes | Single enzyme | |||
Parts | 18 | 16 | 3 | 11 |
DNA | 20 | 10 | 15 | 29 |
Buffer | 5 | 5 | 5 | 5 |
BSA | 0.5 | 0.5 | 0.5 | 0.5 |
ddH2O | 21.5 | 31.5 | 28 | 14.5 |
enzyme | EcoRⅠ 1.5 | XbaⅠ1.5 | XbaⅠ1 | SpeⅠ1 |
SpeⅠ1.5 | PstⅠ1.5 |
After 8hours
Parts | 3 | 11 |
DNA | 20 | 20 |
Buffer | EcoRⅠbuffer 5 | Buffer3 5 |
BSA | 0.5 | |
ddH2O | 23.5 | 23 |
enzyme | EcoRⅠ1 | PstⅠ1 |
8.7
1. Checking 4+5, 2+6 ‘s ligation by Gel electrophoresis
Digestion
μL | 2+6 | 4+5 |
DNA | 2(53ng) | 3(28ng) |
Buffer2 | 1 | 1 |
BSA | 0.1 | 0.1 |
ddH2O | 6.7 | 5.9 |
EcoRⅠ | 0.1 | 0.1 |
PstⅠ | 0.1 | 0.1 |
check by small gel
8.8
1.transform the parts of 3-18,11-16,14-19
2. Active bacteria of 4.5.18.11 and culture in LB liquid medium
3. Presrvation species parts of 4-5
8.9
1.check 2+6,4+5 by small gel
2. Measure density
number | ng/µl | A260∕A280 | |
2+6 | 1 | 58 | 1.902 |
2 | 78.5 | 1.826 | |
3 | 62.5 | 1.953 | |
4 | 60.5 | 2.017 | |
4+5 | 1 | 31 | 2.081 |
2 | 33 | 2.089 | |
3 | 20.5 | 2.291 |
3. Digestion
parts | 2+6 | 5+4 | |||||
number | 1 | 2 | 3 | 4 | 1 | 2 | 3 |
DNA | 2 | 2 | 2 | 2 | 3 | 3 | 5 |
Buffer3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
BSA | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
ddH2O | 6.5 | 6.5 | 6.5 | 6.5 | 5.5 | 5.5 | 5.5 |
EcoRⅠ | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 |
PstⅠ | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 |
4. Extract plasmid of 4,5,18,11
Measure density
number | ng/µl | A260∕A280 |
5 | 73 | 2.000 |
4 | 71.5 | 2.072 |
18 | 32.5 | 2.305 |
3 | 85 | 1.910 |
11 | 95.5 | 1.950 |
16 | 119 | 1.867 |
Digestion 50µl
5 | 4 | 18 | 3 | 11 | 16 | |
DNA | 13 | 13 | 30 | 11 | 10 | 8 |
Buffer3 | 5 | 5 | 5 | 5 | 5 | 5 |
BSA | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 |
ddH2O | 29.5 | 29.5 | 19.5 | 31.5 | 30.5 | 34.5 |
enzyme | EcoRⅠ 1 | XbaⅠ1 | EcoRⅠ 1 | XbaⅠ1 | EcoRⅠ 1 | XbaⅠ1 |
SpeⅠ1 | PstⅠ1 | SpeⅠ1 | PstⅠ1 | SpeⅠ1 | PstⅠ1 |
8.11
1. Checking ligation correctness of 14&19 using small gel----fails
2.try to ligate using 3A
8.12
1. Extract plasmid of 5+4 and Measure density
number | ng/µl | A260∕A280 |
1 | 55 | 1.964 |
2 | 39 | 2.324 |
3 | 41 | 2.412 |
4 | 81 | 2.051 |
5 | 42 | 2.154 |
6 | 58 | 1.966 |
2.check by single enzyme digestion
number | 1 | 2 | 3 | 4 | 5 | 6 |
DNA | 3 | 4 | 4 | 2 | 4 | 3 |
Buffer EcoR I | 1 | 1 | 1 | 1 | 1 | 1 |
ddH2O | 5.5 | 4.5 | 4.5 | 6.5 | 4.5 | 5.5 |
EcoRⅠ | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 |
Check using small gel
3.cultrue bacteria of part 13
4. ligate 2+6+3,11+16,18+13
8.13
1.Extract plasmid
2.pick colony of 2+6+3,18+3,16+3 and culture in shaker
8.14
Checking whether colony of different size contain different plasmids, or whether could be used to pick colony raising transformation possibility. But it made no difference
8.15
1.measure density
number | µg/µl | A260∕A280 |
2+6+3-1 | 0.032 | 3.439 |
2+6+3-2 | 0.064 | 2.370 |
11+16 | 0.056 | 2.306 |
11+16 | 0.102 | 2.010 |
18+3 | 0.037 | 2.434 |
18+3 | 0.033 | 2.332 |
2. Digestion
Single enzyme 10µl
number | 2+6+3-1 | 2+6+3-2 | 3+18-1 | 3+18-2 | 11+16 | 11+16 |
DNA | 4 | 2 | 4 | 6 | 2.5 | 1.5 |
Buffer EcoR I | 1 | 1 | 1 | 1 | 1 | 1 |
ddH2O | 4.7 | 6.7 | 4.7 | 2.7 | 6.2 | 7.2 |
EcoRⅠ | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 |
Double enzyme 10µl
number | 18+3-1 | 18+3-2 | 18 | 2+6+3-1 | 2+6+3-2 | 2+6 | 11+16 | 11+16 |
DNA | 4 | 6 | 6 | 4 | 2 | 3 | 2.5 | 1.5 |
Buffer3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
BSA | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
ddH2O | 4.3 | 2.3 | 2.4 | 4.3 | 6.3 | 5.3 | 5.8 | 6.8 |
EcoRⅠ | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 |
PstⅠ | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 |
8.16
Check yesterdays’ digestion by gel electrophoresis
Ladder | 18-3 | 18-3 | 18 | 6-2-3 | 6-2-3 | 6-2 | ||
100bp plus | single | double | single | double | double | double | double | double |
8.17
1. Presrvation species of pSB1AC3_BBa13017
2. Extract plasmid of 18,pSB1AC3_BBa13017,measure density
number | µg/µl | A260∕A280 |
pSB1AC3_BBa13017-1 | 0.199 | 2.036 |
pSB1AC3_BBa13017-2 | 0.168 | 2.036 |
pSB1AC3_BBa13017-3 | 0.113 | 2.083 |
pSB1AC3_BBa13017-4 | 0.103 | 2.102 |
pSB1AC3_BBa13017-5 | 0.174 | 2.129 |
pSB1AC3_BBa13017-6 | 0.147 | 2.115 |
pSB1AC3_BBa13017-7 | 0.064 | 2.345 |
pSB1AC3_BBa13017-8 | 0.106 | 2.186 |
pSB1AC3_BBa13017-9 | 0.163 | 2.138 |
pSB1AC3_BBa13017-10 | 0.170 | 2.092 |
18-1 | 0.110 | 2.095 |
18-2 | 0.124 | 2.102 |
18-3 | 0.140 | 2.121 |
3. Prepare medium of TY(culturing rhizobium),CM(supplemented medium)
4. Digest pSB1AC3_BBa13017 as Carrier
DNA | 5 |
Buffer2 | 5 |
BSA | 0.5 |
ddH2O | 37.5 |
EcoRⅠ | 1 |
PstⅠ | 1 |
Extract 3055bp strip
8.18
1.Ligate 5,4
2.transform pSB1C3
8.19
1.culture rhizobium on TY medium
2.prepare CM,M9 medium
3.LeuB PCR
4. Presrvation species of Bean strain
5. Extract plasmid and Digest
number | 18 | 3 | 2+6 | 16 | 11 | 14+19 | 13 |
DNA | 12 | 10 | 18 | 9 | 7 | 7 | 6 |
Buffer2 | 5 | 5 | 5 | 5 | 5 | 5 | 5 |
BSA | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 |
ddH2O | 30.1 | 31.5 | 24.1 | 33.1 | 35.1 | 35.1 | 36.1 |
enzyme | EcoRI1.2 | XbaⅠ1.2 | EcoRI1.2 | XbaⅠ1.2 | EcoRI1.2 | EcoRI1.2 | XbaⅠ1.2 |
SpeⅠ1.2 | PstⅠ1.2 | SpeⅠ1.2 | PstⅠ1.2 | SpeⅠ1.2 | SpeⅠ1.2 | PstⅠ1.2 |
8.20
1. Presrvation species of 5+4 and extract plasmid,measure density
number | ng/µl | A260∕A280 |
1 | 99.5 | 2.098 |
2 | 140.5 | 2.162 |
3 | 99 | 2.152 |
4 | 123.5 | 2.093 |
5 | 137.5 | 2.083 |
2. Digestion
number | 1 | 2 | 3 | 4 | 5 |
DNA | 1.3 | 1 | 1.3 | 1 | 1 |
Buffer3 | 1 | 1 | 1 | 1 | 1 |
BSA | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
ddH2O | 7.1 | 7.4 | 7.1 | 7.4 | 7.4 |
EcoRⅠ | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 |
PstⅠ | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 |
8.22
1、Presrvation species of 5+4 and extract plasmid,measure density, digest
2、pick single colonies of 19-14&13;2-6&3 , 11&16 and culture in shaker
3、PCR Leu(50ul),recover and check
10×Taq Buffer(with MgSO4) 5μL
MgCl2 4μL
Primer-F 1.5μL
Primer-R 1.5μL
H2O 33.5μL
dNTP 2μL
DNA 2μL
Taq 0.25μL
Pfu 0.25μL
Recommended By Advicer Tan
Result: success
8.23
1、Presrvation species of 2 6&3,11&16,14 19&13 and extract plasmid, measure density,digest
density
number | 2 6&3 | 11&16 | 1419&13 | | | | |
density (ng/ul) | 30 | 49 | 45 | 132 | 62 | 42 | 64 |
Digestion
Single enzyme
2 6&3 | 11&16 | 1419&13 | | | | | |
DNA | 3.3 | 2 | 2.2 | 1 | 1.5 | 2.3 | 1.5 |
Buffer4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
DdH2O | 5.4 | 6.6 | 6.4 | 7.6 | 7.1 | 6.3 | 7.1 |
XbaI | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 |
BSA | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
Double enzymes
2 6&3 | 11&16 | 1419&13 | | | | | |
DNA | 3.3 | 2 | 2.2 | 1 | 1.5 | 2.3 | 1.5 |
Buffer4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
BSA | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
H2O | 5.1 | 6.4 | 6.2 | 7.4 | 6.9 | 6.1 | 6.9 |
EcoRI-HF | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 |
SpeI | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 |
result:success
2、Preservation species of CFN42 WT and BL21
3、check 18&3 be small gel ——succeed
4、Prepare medium:LB liquid medium 300ml,
LB medium 150ml
TY medium 150ml
5、Prepare SMM medium,+ pro+ Vb1
8.24
1、Prepare SMM medium :MM+pro+Vb1 MM+pro+Vb1+leu
2、check by small gel
8.25
1、ligate 11-16&18-13 and 5&4 using 3A
Measure density:
11-16 | 18-13 | 5 | 4 | |
density(ng/ul) | 46.5 | 136.5 | 85.5 | 71 |
Double enzymes
5 | 4 | 18-3 | 11-16 | |
DNA | 12 | 10 | 10 | 25 |
Buffer4 | 5 | 5 | 5 | 5 |
BSA | 0.5 | 0.5 | 0.5 | 0.5 |
H2O | 29.5 | 32.5 | 31.5 | 16.5 |
enzyme1 | EcoRI-HF 1.5 | XbaI 1 | EcoRI-HF 1.5 | XbaI 1.5 |
enzyme 2 | SpeI 1.5 | PstI 1 | SpeI 1.5 | PstI 1.5 |
Check by gel
Ligation of 5&4
5 | 4 | AC | T4 | Buffer | H2O |
6 | 4 | 4 | 1 | 2 | 3 |
Ligation of 11-16&18-13:(ul)
K381001 | 18-3 | 11-16 | Buffer | T4 |
5 | 6 | 6 | 2 | 1 |
2、inoculate HB101 and BL21 into the solid medium (MM+VB1+Pro and MM+VB1+Pro+Leu),culture the Rhizobium etli CFN42 and Sinorhizobium meliloti 1021 on TY solid medium at 30℃
8.27
1、transform 18-3&11
2、pick 3 colonies of 5&4 and culture in l LB liquid medium
3、culture LeuB and K115001 in LB liquid medium
4、recover 22,21,3 and ligate 21&3,22&3
Ligation of 21&3:(ul)
22 | 3 | T4 | Buffer | ddH2O |
7 | 4 | 1 | 2 | 6 |
Ligation of 22&3:(ul)
21 | 3 | T4 | Buffer | ddH2O |
8.5 | 4 | 1 | 2 | 4.5 |
8.28
1、Prepare medium:LB liquid medium 500ml
2、transform 5&4 and 18-3&11-16 again,and transform leu 21&3 and 22&3
3、 culture deficient cells
4、culture 18-3&11 in LB liquid medium
8.29
1、PCR :5&4 and leu
PCR(ul)
ddH2O | dNTP | Buffer | Primer-F | Primer-R | dna | Taq |
39.5 | 2 | 5 | 1 | 1 | 1 | 0.5 |
2、Presrvation species of 18-3&11 and extract plasmid,measure density, digest
density(1)19.5(2)130.5
digestion
single enzyme
(1) | (2) | |
DNA | 6 | 1 |
Buffer | 1 | 1 |
BSA | 0.1 | 0.1 |
ddH2O | 2.65 | 7.65 |
XbaI | 0.35 | 0.35 |
Double enzymes:
(1) | (2) | |
DNA | 6 | 1 |
Buffer | 1 | 1 |
BSA | 0.1 | 0.1 |
ddH2O | 2.4 | 7.4 |
EcoRI | 0.25 | 0.25 |
PstI | 0.25 | 0.25 |
Check by small gel
3、pick single colony of 5&4,leu,21&3,22&3,18-3&11-16 and culture in LB liquid medium。
4、prepare TY medium 100ml
8.30
1、Presrvation species of 5&4,leuB89,leuB13 and extract plasmid,measure density, digest
density:
leuB13(1) | 5&4(1) | 5&4(2) | 5&4(3) | leuB89(1) | leuB89(2) | leuB89(3) |
24.5 | 188.0 | 62.0 | 132.0 | 6.8 | 3.1 | 10.8 |
Digestion of 5&4
(1) | (2) | (3) | |
DNA | 1 | 2 | 1 |
Buffer3 | 1 | 1 | 1 |
ddH2O | 7.5 | 6.5 | 7.5 |
BSA | 0.1 | 0.1 | 0.1 |
EcoRI | 0.2 | 0.2 | 0.2 |
PstI | 0.2 | 0.2 | 0.2 |
Check by small gel
Result:5&4 and leuB successfully ligate
8.31
1、did enzyme digestion to 2 part (with psB1AK2 carrier) and K115001 part(with psB1AT3 carrier) and run electrophoresis together with psB1C3. We recycled the carrier part by cutting the gel.
density:
2 part 37.5
K115001 part 120
digestion(ul)
K115001 | 2 | |
DNA | 9 | 9 |
10*H Buffer | 2 | 2 |
EcoRI | 1 | 1 |
PstI | 1 | 1 |
ddH2O | 7 | 7 |
9.1
1、prepare 0147TY medium
Tryptone 5.0g Yeast extract 3.0g CaCl.6H2O 1.3g Agar 15.0g Distilled water 1.0L
2、ligate 18-3&11-16 and 18-3&11
density:
18-3(1) | 18-3(2) | 11-16(1) | 11-16(2) | K carrier(1) | K carrier(2) | AC(1) | AC(2) |
140 | 98 | 278.5 | 203.0 | 17.5 | 17.5 | 7.9 | 13.1 |
Digestion:
18-3 | 11 | 11-16 | |
DNA | 7 | 10 | 4 |
Buffer | 2 | 2 | 2 |
enzyme1 | E 1 | X 1 | X 1 |
enzyme 2 | S 1 | P 1 | P 1 |
DdH2O | 9 | 6 | 12 |
Ligation:
18-3:3ul 16:1ul 2:6ul T4:1ul Buffer:2ul H2O:7ul
18-3:3ul 11-16:4ul 2:6ul T4:1ul Buffer:2ul ddH2O:4ul
9.2
1、Presrvation species of leuB and extract plasmid,measure density, digest
density:
1 | 2 | 3 | 4 |
292.5 | 21.5 | 223.5 | 32.0 |
Digestion:
leuB | K(pSB1C3) | |
EcoRI | 1 | 1 |
PstI | 1 | 1 |
Buffer | 2 | 2 |
DNA | 14 | 8.5 |
ddH2O | 2 | 7.5 |
Check by small gel:
recover:
2、pick single colony of 18-3&11-16 and 18-3&11 and culture in shaker
3、transform BBa_I751250,as LuxI_AHL producer。Transform BBa_J04450(placI+mRFP)
9.3
1、ligate leuB, K(pSB1C3) carrier and transform
density:
Before Concentration | After Concentration | |
LeuB | 15 | 36 |
pSB1C3 | 8 | 25 |
ligation
LeuB | Psb1c3 | T4 | Buffer | DdH2O |
6 | 4 | 1 | 2 | 7 |
2、extract plasmid of 8-3&11-16 and 18-3&11, digest,and check by small gel
Density:
18-3&11-161 | 18-3&11-162 | 18-3&11 1 | 18-3&11 2 | 5-4(AC)1 | 5-4(AC) 2 | 2-6-3 |
265 | 242 | 192 | 217.5 | 193 | 72 | 63.5 |
digestion:
18-3&11-16(1) | 18-3&11-16(2) | 18-3&11(1) | 18-3&11(2) | |
DNA | 3.5 | 4 | 5 | 4.5 |
Buffer | 2 | 2 | 2 | 2 |
EcoRI | 1 | 1 | 1 | 1 |
PstI | 1 | 1 | 1 | 1 |
ddH2O | 12.5 | 12 | 11 | 11.5 |
Check by gel:
2、ligate 5-4&2-6-3
ligation
K | 5-4 | 2-6-3 | T4连接酶 | Buffer | DdH2O |
6 | 4 | 2 | 1 | 2 | 5 |
9.4
1、transform 5-4&2-6-3,extract plasmid of 2-6-3与2
2、transform Pea Rhizobium
9.5
1、Presrvation species of leuB and extract plasmid,measure density, digest, PCR ,check by gel
PCR
1 | 2 | 3 | |||
ddH2O | 37.5 | 37 | 36.5 | 36.5 | 36.5 |
dNTPmix | 4 | 4 | 4 | 4 | 4 |
Buffer | 5 | 5 | 5 | 5 | 5 |
VF2 | 1.5 | 1.5 | 1.5 | 1.5 | 1.5 |
VR | 1.5 | 1.5 | 1.5 | 1.5 | 1.5 |
tamplate | 0 | 0.5 | 1 | 1 | 1 |
Taq | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 |
Check by gel
digestion
LeuB 1 | LeuB 3 | |
DNA | 3 | 3 |
BufferM | 0.5 | 0.5 |
ddH2O | 1.1 | 1.1 |
SpeI | 0.2 | 0.2 |
XbaI | 0.2 | 0.2 |
Check by gel
9.6
1、Presrvation species of 54263 and extract plasmid, digest, PCR ,check by gel
digestion
1 | 2 | 3 | |
DNA | 1.4 | 1.4 | 1.7 |
Buffer | 0.5 | 0.5 | 0.5 |
DdH2O | 2.5 | 2.5 | 2.2 |
EcoRI | 0.3 | 0.3 | 0.3 |
PstI | 0.3 | 0.3 | 0.3 |
9.7
1、measure OD of Deficient cell
MM(leuB-) | 1 leuB+ | 2 leuB+ | 3 leuB+ | 4 leuB+ | |
OD(A340) | 1.611-1 | 1.698-1 | 1.818-1 | 1.548-1 | 1.881-1 |
2、digest leuB、③、K115001
digestion:
8 | 6 | LeuB | 3 | T1 | T2 | T3 | |
DNA | 9 | 9 | 10 | 10 | 10 | 13 | 12 |
Buffer | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
DdH2O | 7 | 6.6 | 5.6 | 5.6 | 5.6 | 2.6 | 3.6 |
EcoRI | 1 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 |
SpeI | 1 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 |
density:
LeuB 98.0
T 1:93.5 2:73.5 3:87
3 1:97 2:73 3:82
9.8
1、extract plasmid of 6,and digest with LeuB
Density of 6:
1 | 2 | 3 |
57 | 68 | 50 |
digestion
6 | 6 | LeuB | |
DNA | 6 | 6 | 10 |
Buffer | 2 | 2 | 2 |
DdH2O | 9.6 | 9.6 | 5.6 |
EcoRI | 1.2 | 1.2 | 1.2 |
SpeI | 1.2 | 1.2 | 1.2 |
2、ligate leuB&3
ligation:
T4 | Buffer | leuB | 3 | T carrier | DdH2O |
1 | 2 | 3 | 0.7 | 10 | 3.3 |
9.9
1、check 6, leuB, 8
Gel:
Ligate 8&6、6&leuB
Ligation of 8&6:
T carrier | 8 | 6 | T4 | Buffer | DdH2O |
10 | 1 | 1 | 1 | 2 | 5 |
Ligation of 6&leuB
T carrier | 6 | LeuB | T4 | Buffer | DdH2O |
10 | 1 | 3 | 1 | 2 | 3 |
9.10
1、transform 8&6 and leuB
2、culture leuB&3 in LB medium
3、device checking:
Device1 has strong Fluorescent and device 2 hasslight one
Picture:
9.11
1、PCR:sinR、pro-RBS-sinR、raiR、raiR-pro
density
sinI | 12.8 |
SinI pro | 9.6 |
Pro-RBS-sinI | 15.1 |
RaiI | 14.2 |
RaiI pro | 9.4 |
Pro-RBS-raiI | 11.4 |
SinR pro | 11.5 |
Pro-RBS-raiR | 15.0 |
2、pick single colony of 6&leuB
9.12
1、digest 21、22 and ligate
digestion
21 | 22 | |
Buffer | 2 | 2 |
NDA | 13.6 | 15 |
DdH2O | 2 | 0.6 |
EcoRI | 1.2 | 1.2 |
SpeI | 1.2 | 1.2 |
ligation
21&3
21 | 3 | Buffer | T4 | DdH2O | T |
3 | 1 | 2 | 1 | 3 | 10 |
22&3
22 | 3 | Buffer | T4 | DdH2O | T |
5 | 1 | 2 | 1 | 1 | 10 |
2、extract plasmid of leuB-6 and measure density
density:16.5
9.13
1、transform and culture 21&3,22&3,8&6,recover PSB1C3 carrier
2.Pcr
ddH2O | Pfu with MgSO4 buffer | dNTP | PF | PR | Template | Pfu |
38µl | 5µl | 4µl | 1µl | 1µl | 0.5µl | 0.5µl |
Results:failed
3.digest sinR, sinI,pro- sinI
Digestion:20µl
sinR | sinI | pro- sinI | |
DNA | 10 | 11 | 16 |
Buffer 10×H | 2 | 2 | 2 |
ddH2O | 6 | 5 | 0 |
EcoRI | 1 | 1 | 1 |
PstI | 1 | 1 | 1 |
9.15
Digestion of Leu&3 :20µl
number | 1 | 2 | 3 |
DNA(µl) | 10 | 10 | 9 |
Buffer 10×H(µl) | 2 | 2 | 2 |
ddH2O(µl) | 6 | 6 | 7 |
XbaⅠ(µl) | 1 | 1 | 1 |
PstⅠ(µl) | 1 | 1 | 1 |
9.16
Digest 6 and leub
number | 6 | Leu |
DNA(µl) | 15 | 9 |
Buffer 10×M(µl) | 2 | 2 |
ddH2O(µl) | 2 | 7 |
enzymew | SpeⅠ(µl) 1 | XbaⅠ(µl) 1 |
PstⅠ(µl) 1 |
9.18
Ligate Leu and 6 using 3A
Leu | 6 | buffer | T4 | |
10µl | 2µl | 6µl | 2µl | 1µl |
Gel picture:
Digest 6
number | DNA(µl) | Buffer 10× (µl) | PstⅠ(µl) | ddH2O(µl) |
6 | 9 | 2 | 1 | 8 |
9.20
Measure density
number | ng/µl | A260∕A280 |
6 | 179.5 | 1.851 |
pSB1C3-1 | 6.3 | |
pSB1C3-2 | 8.6 | 3.510 |
pSB1C3-3 | 5.1 |
Digest Leu
DNA(µl) | Buffer 10×M(µl) | ddH2O(µl) | PstⅠ(µl) | XbaⅠ(µl) |
6 | 2 | 2 | 2 | 8 |
Ligate Leu& 6
Leu | 6 | buffer | T4 | ddH2O |
6 | 4 | 2 | 1 | 7 |
9.21
Measure density
number | ng/µl | A260∕A280 |
raiⅠpro-3 | 29.5 | 1.666 |
raiⅠpro-2 | 28.5 | 1.885 |
raiⅠpro-1 | 23.0 | 1.818 |
C0076 | 161.0 | 1.793 |
E0020e0fp-1 | 28.5 | 1.676 |
E0020e0fp-2 | 19.5 | 2.19 |