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Team:Grenoble/Projet/Modelling
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Revision as of 13:44, 27 October 2011
Modelling
In the particular case of our circuit and final use of the bacteria, the modelling team had to check the effectiveness of our circuit of course, but also had to give the specificities (size, number of bacteria, IPTG gradient specificities) of the measuring device we intend to produce.
Table of content
In the next pages we first expose technically which algorithms we used for both deterministic modelling and
stochastic modelling and explain our MATLAB scripts (available
here) in the hope it could help
future modelling teams.
We exposed the results in the last section, for anyone who is interested in
the results only
Construction of the model :
Establishment of the equation Toggle switchQuorum sensing
Our algorithms
Stochastic Modelling :
Sensitivity to noise
Gillespie algorithm
Mean, standard deviation and statistical properties
Parameters
Table of parameters
Sensitivity to parameters
You can find the results of our modelling results in the results page.
